[PDF] Top 20 Exploring the use of a structural alphabet for a structural prediction of protein loops
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Exploring the use of a structural alphabet for a structural prediction of protein loops
... expect the loop conformation prediction ? Our scores are dicult to compare with the results of other approaches, usually in terms of RMS deviations between the predicted ... Voir le document complet
20
Structural deformation upon protein-protein interaction: A structural alphabet approach
... The prediction of protein-protein interactions is a current ...predict the 3D struc- ture of the resulting complex, given the structures of ... Voir le document complet
19
New assessment of a structural alphabet.
... function-related structural motifs. For instance, the relation of PBs to the canonical structures in immunoglobulins could be very interesting ...As the prediction ... Voir le document complet
13
Structural Alphabet: From a Local Point of View to a Global Description of Protein 3D Structures
... examine the relationship between the structural alphabet and the 3D structure ...topology. The results of our study are divided into three consecutive ...at the ... Voir le document complet
70
Use of a structural alphabet for analysis of short loops connecting repetitive structures.
... that use a library or set of small prototypes, ...than the conven- tional three, can help improve definitions of these regions and may also improve ...Such a library consti- ... Voir le document complet
14
Study of structural and functional dynamics of translocator protein, a new target for treatment of malaria
... .these The drug-molecule binding was characterized to such an extent that the radio-labelled variants of drugs are used for diagnosis of various diseases, and PBR was proposed as ... Voir le document complet
241
Développement d'un alphabet structural intégrant la flexibilité des structures protéiques
... Unit of Structural Alphabet (USA) par ...fragment structural [123, ...fragment structural i à l’aide d’un vecteur de distances entre les coordonnées cartésiennes des Cα non ... Voir le document complet
196
NAfragDB: A Multi-Purpose Structural Database of Nucleic-Acid/Protein Complexes for Advances Users
... L’archive ouverte pluridisciplinaire HAL, est destinée au dépôt et à la diffusion de documents scientifiques de niveau recherche, publiés ou non, émanant des établissements d’enseignemen[r] ... Voir le document complet
2
A unified treatment for the elastoplastic bifurcation of structural elements
... is a multi-disciplinary open access archive for the deposit and dissemination of sci- entific research documents, whether they are pub- lished or ...not. The documents may come from ... Voir le document complet
3
Preparation and characterization of bacterial protein complexes for structural analysis
... HARACTERIZATION OF P ROTEIN C OMPLEXES ...in the preparation of a protein com- ...often a powerful purification step prior to crystallization screen- ing, removing protein ... Voir le document complet
44
Structural Determinants of Cold Adaptation and Stability in a Large Protein
... 4) For instance, the denaturation enthalpy at 20 °C for AHA is ...and the entropic term (T ⌬S) amounts to 2.2 kcal/mol. The corresponding values for mutant N150D are ... Voir le document complet
6
Structural and biochemical analyses of a surface array protein of Campylobacter fetus
... one of several versions: author’s original, accepted manuscript or the publisher’s ...and use of this website and the material on it are subject to the Terms and Conditions set ... Voir le document complet
10
Protein symmetrization as a novel tool in structural biology
... IN THE HELIX‐BASED STRATEGY 3.2.1 B IOPHYSICAL ANALYSIS OF M AG ΔN CONSTRUCTS The advantage of the helix‐based strategy is that it allows one to predict the structure of ... Voir le document complet
164
Optimizing structural modeling for a specific protein scaffold: knottins or inhibitor cystine knots
... with the protein query. For example, the DC4 criter- ion, which was shown to improve template selection, could be directly derived from the analysis of the disul- fide ... Voir le document complet
20
Role of Tau as a Microtubule-Associated Protein: Structural and Functional Aspects
... phases of assembly and disassembly in a process called ‘‘dynamic instability’’ ( Mitchison and Kirschner, 1984 ...dynamics of the system, MTs have been difficult to study from a ... Voir le document complet
15
Tailing miniSOG: structural bases of the complex photophysics of a flavin-binding singlet oxygen photosensitizing protein
... under a Creative Commons Attribution ...permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and ... Voir le document complet
11
Safety Standards for the Fire Protection of Structural Steel Buildings Intended for Civilian Use
... Vous avez des questions? Nous pouvons vous aider. Pour communiquer directement avec un auteur, consultez la première page de la revue dans laquelle son article a été publié afin de trouver ses coordonnées. Si vous ... Voir le document complet
23
Structural characterization of protein using an enzymatic reactor
... analyses of residual structures of protein allowed to highlight the presence of both structured and deployed protein ...not the actual degree of ...Loss of ... Voir le document complet
1
Accurate Representation of Protein-Ligand Structural Diversity in the Protein Data Bank (PDB)
... Abstract: The number of available protein structures in the Protein Data Bank (PDB) has considerably increased in recent ...to the growth of structures and complexes, ... Voir le document complet
18
Geometric algorithms for the conformational analysis of long protein loops
... satisfying the loop-closure constraints and Ꮿ free the subset of clash-free ...is the subset of the geometrically feasible conformations to be ... Voir le document complet
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