brPb‐662948 A01 58.9 Framework DArT 44 79

(1)

Supplementary Table S3: Graphical genotypes and marker information for a Brassica napuslinkage map based on doubled haploid population BnaLMDH

Locus name Chromo

some ¹Position ² Locus type ³ Marker type ⁴

Observe d Lynx‐

037DH alleles

Observe d Monty‐

028DH alleles

Skewed allele

ratios ⁵ 6BnaLMDH-001 BnaLMDH-002 BnaLMDH-003 BnaLMDH-004 BnaLMDH-005 BnaLMDH-006 BnaLMDH-007 BnaLMDH-008 BnaLMDH-009 BnaLMDH-010 BnaLMDH-011 BnaLMDH-012 BnaLMDH-013 BnaLMDH-014 BnaLMDH-015 BnaLMDH-016 BnaLMDH-017 BnaLMDH-018 BnaLMDH-019 BnaLMDH-020 BnaLMDH-021 BnaLMDH-022 BnaLMDH-023 BnaLMDH-024 BnaLMDH-025 BnaLMDH-026 BnaLMDH-027 BnaLMDH-028 BnaLMDH-029 BnaLMDH-030 BnaLMDH-031 BnaLMDH-032 BnaLMDH-033 BnaLMDH-034 BnaLMDH-035 BnaLMDH-036 BnaLMDH-037 BnaLMDH-038 BnaLMDH-039 BnaLMDH-040 BnaLMDH-041 BnaLMDH-042 BnaLMDH-043 BnaLMDH-044 BnaLMDH-045 BnaLMDH-046 BnaLMDH-047 BnaLMDH-048 BnaLMDH-049 BnaLMDH-050 BnaLMDH-051 BnaLMDH-052 BnaLMDH-053 BnaLMDH-054 BnaLMDH-055 BnaLMDH-056 BnaLMDH-057 BnaLMDH-058 BnaLMDH-059 BnaLMDH-060 BnaLMDH-061 BnaLMDH-062 BnaLMDH-063 BnaLMDH-064 BnaLMDH-065 BnaLMDH-066 BnaLMDH-067 BnaLMDH-068 BnaLMDH-069 BnaLMDH-070 BnaLMDH-071 BnaLMDH-072 BnaLMDH-073 BnaLMDH-074 BnaLMDH-075 BnaLMDH-076 BnaLMDH-077 BnaLMDH-078 BnaLMDH-079 BnaLMDH-080 BnaLMDH-081 BnaLMDH-082 BnaLMDH-083 BnaLMDH-084 BnaLMDH-085 BnaLMDH-086 BnaLMDH-087 BnaLMDH-088 BnaLMDH-089 BnaLMDH-090 BnaLMDH-091 BnaLMDH-092 BnaLMDH-093 BnaLMDH-094 BnaLMDH-095 BnaLMDH-096 BnaLMDH-097 BnaLMDH-098 BnaLMDH-099 BnaLMDH-100 BnaLMDH-101 BnaLMDH-102 BnaLMDH-103 BnaLMDH-104 BnaLMDH-105 BnaLMDH-106 BnaLMDH-107 BnaLMDH-108 BnaLMDH-109 BnaLMDH-110 BnaLMDH-111 BnaLMDH-112 BnaLMDH-113 BnaLMDH-114 BnaLMDH-115 BnaLMDH-116 BnaLMDH-117 BnaLMDH-118 BnaLMDH-119 BnaLMDH-120 BnaLMDH-121 BnaLMDH-122 BnaLMDH-123 BnaLMDH-124 BnaLMDH-125 BnaLMDH-126 BnaLMDH-127 BnaLMDH-128 BnaLMDH-129 BnaLMDH-130 BnaLMDH-131

sN11641 A01 0 Framework SSR 38 49 01 10120102 2120 012 2010 0212 2 202021020 0 0 0 02121021 1 12 2 21202120 0 02120121 10201 1202 2021 10121 1 1 1 12 2 2 20 0120212 2 2 2 212 2 2 210 020120 010 0 020 0 0 01 10 brPb‐659711 A01 2.5 Framework DArT 41 52 01 102 2 2102 2121012 2010 0212 2 202 2 21020 0202 2121021 1 12 2 21202120 02 2 2 21 121 10201 120 02 2 21 12121 101 120 0201 1202102 2 2 212 20 01 1 120120 010 0 020 0 0 01 1 1 sN0248I A01 3.7 Framework SSR 37 52 01 102 2 2102 2121012 2010 0212 2 202021020 0 0 0 02121021 1 12 2 21202120 02 2 2 20121 10201 1202 2021 10121 1 1 1 12 2 2 20 0120212 2 2 2 212 2 2 210 020 020 010 0 010 0 0 01 10 sN11707 A01 9.4 Framework SSR 33 56 * 01 102 2 2102 2121012 2010 0212 2 202021020 0 0 0 02121021 1 12 2 2120 0120 02 2 2 20121 102021202 202 210121 1 1 1 12 2 2 20 01202 2 2 2 2 2 212 2 2 210 020120 010 0 020 0 0 0120 Ol10‐D03a A01 29.5 Framework SSR 30 60 ** 01202 2 2102 212 201 12010 02 2 2 2102021020 0 0 0 01 12 2021 12 2 21 1202120 02 2 2 2021 1 102021201202 2 202 2121 1 12 2 2 20 01202 2 2 2 2 2 212 21210 020120 010 0 020 0 0 02 20 Ra2‐G09 A01 36.3 Framework SSR 36 54 01202 2 2102 212 201 12010 0212 2102021020 0 0 0 01 12 2021 12 2 21 1202120 012 2 2021 1 102021 1012021 1021 121 1 12 2 2 20 01202 2 2 2 2 2 212 21210 020120 010 0 020 0 0 02 20 brPb‐660511 A01 58.1 Framework DArT 49 79 ** 21212 20120212 2 21 1212 2 2 2121 1 12 2 2 2 212 212 21 1 12 2 2 212 2 21 1 12 2 2 2 2 2 2 2 21 121 1 12 2 2 21 121212 2 2121 1212 2 212 212 2 202 2 2 2 2 2 212 2121 1 1 12 2 21 1 1 1 12 21212 2 21 {sN0990b} A01 Attached SSR 17 72 *** 01202 2 2 202 2 2 2 202 2 2020 02 2 2120202 2020 0 0 0 0120202 2 2 2 2 21 1 102 2 20 02 2 2102 21 102021201202 2 2021 1212 2 2 2 2 20 02 202 2 2 2 2 2 2 2 2 21210 0202 20 010 0 020 0 0 02 20 {sR11990} A01 Attached SSR 26 62 *** 01202 2 2102 202 201 12020 02121 10202 2010 0 0 0 021 1202 212 2 21 1 102 2 20 02 2 2102 21 10202 2 201202 2 202 2121012 2 2 20 02 202 2 2 2 2 2 212 21210 0102 20 010 0 020 0 0 02 20 [sR1464] A01 Redundant SSR 31 58 ** 01202 2 2102 212 201 12020 02121 10202 2010 0 0 0 01 1 1202 212 2 2 21 102 2 20 02 2 21021 1 102021 101202 2 2021 1212 2 212 20 02 202 2 2 2 2 2 212 21210 010 020 010 0 020 0 0 02 20 brPb‐662948 A01 58.9 Framework DArT 44 79 ** 21212 2 212 2 20 02 21 1212 2 2 2121 1 1202 2 212 202 201 12 2 2 210 02 21 12 2 2 2 2 2 2 2 21 121 1 12 2 2 21 121212 2 2121 1212 2 212 212 2 2 2 2 2 2 2 2 2 212 2121 1 1 12 2 21 1 1 1 12 21212 2 20 brPb‐660893 A01 67.3 Framework DArT 42 77 ** 21212 2 212 2 20 02 21 1212 2 2 2121 1 1202 2 2 2 2 202 20212 2 2 210 02 21 12 2 2 2 2 2 2 2 21 121212 2021 121212 2 2121 12 2 2 21021 12 2 2 2 2 2 2 2 2 2 212 2121 1 1 101 1 1 1 1 12 2 212012 20 [brPb‐661581] A01 Redundant DArT 55 76 21212 2 212 2 212 2 2 21212 212121 12 2 2 2 2 2 2 2 21 121 1 12 2 21 12 2 2 21 12 2 212 2 2121 121212 2 2 21 121 1 12 2 2121 1 12 2 2 2121 12 2 2 2 2 212 2 21 12 212121 121 1 1 1 1 1 12 2121 12 21 [brPb‐659237] A01 Redundant DArT 49 72 * 21202 2 212 2 20 02 2 20212 212121 12 202 2 2 2 2 201201 12 2 21 10 02 21 12 2 212 2 2121 121212 2 2 21 121 1 12 2 2121 1 12 2 2 2121 12 2 2 2 2 212 2 21 12 212121 121 1 1 1 1 1 12 2121 12 20 brPb‐658209 A01 80.2 Framework DArT 55 76 21212 2 212 2 212 2 2 21212 212121 12 2 2 2 2 2 2 2 21 121 1 12 2 21 12 2 2 21 12 2 212 2 2121 121212 2 2 21 121 1 12 2 2121 1 12 2 2 2121 12 2 2 2 2 212 2 21 12 212121 121 1 1 1 1 1 12 2121 12 21 [brPb‐661568] A01 Redundant DArT 55 67 21212 201 12 20 02 2 21212 212121 12 202 212 2 201 101 1 1 121 10 0121 12 2 212 2 2121 12 2 212 2 2 21 121 1 12 2 2121 1 12 2 2 21 1 12 2 2 2 2 2 212 2 21 12 212121 12 21 1 1 1 1 12 2121 12 20 [Ra2‐E04] A01 Redundant SSR 38 52 01202 2 2102 212 20212020 02121 10202 2020 0 0 0 01 1 1 1021 12 2121 102 210 0212102 2 2102021 101 102 2 2021 1 12 2 2 21 1 10 02 202 212 2 21 12 21210 010210 010 0 020 0 0 02 20 brPb‐658104 A01 89.7 Framework DArT 59 68 21212 2 21 12 212 2 2 21212 212121 10212 212 201 1 1 1 1 1 1 121 12 2121 102 212 2 2121 12 2 212 2 2 21 121 1 12 2 2121 1 12 2 2 21 1 12 2 2 2 2 2 212 2 21 12 212121 1021 1 1 1 1 12 2121 12 2 2 brPb‐661055 A01 94.5 Framework DArT 59 72 21212 21 1 12 212 2 2 21212 212121 12 212 212 2 21 1 121 1 1 121 12 212 212 2 212 2 2121 12 2 212 2 2 21 121 1 12 2 2 2 21 1 1212 21 1 12 2 2 2 2 2 21 12 21 12 212121 12 21 1 1 1 1 12 2121 12 2 2 sR12206 A01 98.5 Framework SSR 56 68 2121201 1 12 20 02 2 21212 212121 12 212 212 2 21 1 121 1 1 121 10212 212 2 212 2 212 212 2 2102 2 21021 1 12 2 2 2 2121212 21 1 12 2 2 2 2 2 21 12 21 12 2 21 121 121 1 1 1 1 1 12 2121 12 20 brPb‐838487 A01 138.6 Framework DArT 51 65 2 2 2 2 21 1 1 1 120 02 2 2 2 202 2 21 121 12102 21 1 12012020 02 2120 0 012 21 1212 2 212 2 212 2 202021 12 21 12 2 2 2 202 21 1 121 1 12 21 12 21 1 12 2 21 1 12 21 1 1 1212 2 21 1 12 212 21 1 10 [brPb‐670633] A01 Redundant DArT 61 65 121 121 1 1 1 1212 2 2 2 2 212 2 21 121 121 12 21 1 121 12 2 21 12 212 2 21 12 21 1212 2 212 2 212 2 212121 12 21 12 212 212 21 1 121 1 12 2 212 21 1 12 2 21010201 1 1212 2 21 1 10212 21 102 [brPb‐842221] A01 Redundant DArT 61 62 121 121 1 1 1 120 02 2 2 2 212 2 21 121 12102 21 1 12012021 12 2120 01 12 21 1212 2 212 2 212 2 212121 12 21 12 212 212 21 1 121 1 12 2 212 21 1 12 2 21 1 12 21 1 1 1212 2 21 1 12 212 21 1 10 brPb‐842239 A01 142.9 Framework DArT 62 67 121 121 1 1 1 1212 2 2 2 2 202 2 21 121 121 12 21 1 121 12 2 21 12 212 2 21 12 21 1212 2 212 2 212 2 212121 12 21 12 212 212 21 1 121 1 12 2 212 21 1 12 2 21 1 12 21 1 1 1212 2 21 1 12 212 21 102 brPb‐659231 A01 144.6 Framework DArT 58 64 121021 1 1 1 12 2 2 2 2 2 2 212 2 21 121 121 12 21 1 12012 2 21 12 212 2 21 12 21 1212 2 212 2 212 2 212121 12 21 12 212 212 21 1 121 102 2 212 21 1 12 2 2101021 1 1 1202021 1 1 121201 102 sN3734a A01 149.4 Framework SSR 44 46 021021 1 101212 202 2 2020 01 121 10102 2010 0 0 0 02 21 10212 2 21 12 201210 0212 2012 2 202021 102102 210212 21 1 121 1 10 0210121 12 2 21 1 12 210 0102 20 010 0 010 0 0 0120

sR12095 A02 0 Framework SSR 46 39 02102 21 1012 21 10121020 02 2 21 102021020 0 0 0 02 212012 202 212101 120 0101201 12101020 0 02101 10 021 1 1 121 12120 01 101 121 12 212 21210 020210 020 0 010 0 0 01 10 [brPb‐662275] A02 Redundant DArT 69 61 2 212 2 21 1 1 12 21 121212 2 2 2 2 2 21 1 12 2 21 121 121 12 212 212 212 2121 1 1 121 1 1 1 121 1 121 1 12 2 21 12121 12 2 21 1 1 121 1212 21 1 121 121 12 212 2121 120121 12 21 1 12 2 2121 12 [brPb‐660779] A02 Redundant DArT 69 61 2 212 2 21 1 1 12 21 121212 2 2 2 2 2 21 1 12 2 21 121 121 12 212 212 212 2121 1 1 121 1 1 1 121 1 121 1 12 2 21 12121 12 2 21 1 1 121 1212 21 1 121 121 12 212 2121 120121 12 21 1 12 2 2121 12 [brPb‐661051] A02 Redundant DArT 69 61 2 212 2 21 1 1 12 21 121212 2 2 2 2 2 21 1 12 2 21 121 121 12 212 212 212 2121 1 1 121 1 1 1 121 1 121 1 12 2 21 12121 12 2 21 1 1 121 1212 21 1 121 121 12 212 2121 120121 12 21 1 12 2 2121 12 brPb‐838772 A02 1.2 Framework DArT 69 61 2 212 2 21 1 1 12 21 121212 2 2 2 2 2 21 1 12 2 21 121 121 12 212 212 212 2121 1 1 121 1 1 1 121 1 121 1 12 2 21 12121 12 2 21 1 1 121 1212 21 1 121 121 12 212 2121 120121 12 21 1 12 2 2121 12 brPb‐660180 A02 2 Framework DArT 68 62 2 212 2 21 1 1 12 212 21212 2 2 2 2 2 21 1 12 2 21 121 121 12 212 212 212 2121 1 1 121 1 1 1 121 1 121 1 12 2 21 12121 12 2 21 1 1 121 1212 21 1 121 121 12 212 2121 120121 12 21 1 12 2 2121 12 {sS1718} A02 Attached SSR 48 41 02102 21 1012 2120121010 02 2 21 102021020 0 0 0 02 212012 212 212101 120 010