[PDF] Top 20 Translation Analysis at the Genome Scale by Ribosome Profiling
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Translation Analysis at the Genome Scale by Ribosome Profiling
... or the discovery that non coding RNA are loaded by ribosome to induce Nonsense-Mediated Decay (NMD) [ 1 – 8 ...Since the initial publication by Weissman’s laboratory ribo- some profi ... Voir le document complet
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Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato
... capacity, the spatio-temporal expression patterns and the subcellular localization at the protein level, this study provides new leads towards addressing the putative function and mode ... Voir le document complet
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Multi-scale structural community organisation of the human genome
... as the ones observed for TADs and interval-communities borders ...to the overall folding of embryonic stem cells genome via specific long-range contacts [51, 52], and appear to be fundamental ... Voir le document complet
14
Ribosome Shunting, Polycistronic Translation, and Evasion of Antiviral Defenses in Plant Pararetroviruses and Beyond
... of the genus Badnavirus, in which the Met-tRNA primer binding site is located at a short distance from the pgRNA transcription start site, in front of the large stem-loop structure ( ... Voir le document complet
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Genome-scale analysis of Mycoplasma agalactiae loci involved in interaction with host cells
... evaluate the potential influence of the mini-Tn insertions on gene expression from these operon-like structures, we analyzed the 4 kb co-linear gene cluster pip-nifS-nifU-mucB (MAG0710 to MAG0740) ... Voir le document complet
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Comparative ribosome profiling uncovers a dominant role for translational control in Toxoplasma gondii
... Ribosome profiling confirms translation of annotated CDSes and identifies novel translated ORFs in Toxoplasma RNA-seq alone cannot distinguish translated from non- translated ...captures ... Voir le document complet
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Whole Genome Profiling provides a robust framework for physical mapping and sequencing in the highly complex and repetitive wheat genome
... possible the number of chimerical contigs. Here, we estimated that, at the final cut-off value of 1e -11 a number of chimerical contigs is ...on the basis of the fraction of BAC pairs ... Voir le document complet
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Whole genome expression profiling of the medial and lateral substantia nigra in Parkinson's disease.
... nigra. The x axis shows differential expression (DE; logarithmic scale), the y axis indicates the respective p value of each ...sequence. The sequences coloured in red show a ... Voir le document complet
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The viral protein NSP1 acts as a ribosome gatekeeper for shutting down host translation and fostering SARS-CoV-2 translation
... in the P-site with the codon- anticodon interaction between the initiator tRNA and the start codon, no 80S ribosomal complexes are assembled and only 43S complexes, presumably scanning ... Voir le document complet
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Genome-scale metabolic reconstruction and analysis of the Trypanosoma brucei metabolism from a Systems biology perspective
... function. The utilization of biomass components to satisfy the objective function is represented by the drain of these metabolites out of the ...ance analysis (FBA), biochemical ... Voir le document complet
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An analysis of translation heterogeneity in ribosome profiling data
... end, the process of translation itself is known to exhibit substantial heterogeneity (Sauert et ...prioritize the efficient translation of proteins destined for export to mitochondria (Shi et ... Voir le document complet
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Brain lateralization probed by water diffusion at the atomic to micrometric scale
... in the study of the neural basis of brain functions is the interregional asymmetry between the left and the right hemisphere and its relation to the factors that modulate ... Voir le document complet
12
Time scale analysis of the homogeneous flame inhibition by alkali metals
... of the reduced flame speed sL/s 0 L with the gaseous agent mass fraction Y IOH,u for lean (φ = ...of the flame speed is observed, which illustrates the catalytic potential of alkali ...basis, ... Voir le document complet
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Time scale analysis of the homogeneous flame inhibition by alkali metals
... time scale analysis of the homogeneous flame inhibition problem is carried out to identify the main parameters controlling the gas phase chemical inter- action of the alkali ... Voir le document complet
25
Phylogenetic analysis of Hemileia vastatrix and related taxa using a genome-scale approach
... challenge the current view by placing the Ustilaginomycotina as a sister group of the Pucciniomycotina instead of the ...Using the alternative approach of the NeighbourNet ... Voir le document complet
5
Two ribosome recruitment sites direct multiple translation events within HIV1 Gag open reading frame
... for the exper- imenter to choose. Most of the time, the resulting models are mostly, but not completely in agreement with the prob- ing ...reflects the inherent property of RNA to fold ... Voir le document complet
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Catégorisation des glioblastomes : typologie et profilage du génome. [Classification of glioblastoma and genome profiling].
... Cancer Genome Atlas Research Network. Comprehensive genomic characterization defines human glioblastoma genes and core pathways. Nature, vol. 455, no. 7216, pages 1061–1068, Oct 2008. Freije WA, Castro-Vargas FE, ... Voir le document complet
10
The CCA-end of P-tRNA Contacts Both the Human RPL36AL and the A-site Bound Translation Termination Factor eRF1 at the Peptidyl Transferase Center of the Human 80S Ribosome
... for the Interactions Between RPL36AL, the CCA-arm of P-tRNA and eRF1, at the Active Site of Human 80s Ribosome Now we are in the situation to propose a model for the ... Voir le document complet
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Genome-wide identification, phylogenetic analysis, expression profiling, and proteinprotein interaction properties of TOPLESS gene family members in tomato
... supported by the absence of obvious phenotypes in single loss-of-function mutants of AtTPL/TPR genes and by the requirement for downregulation of all five AtTPL- TPRs in order to phenocopy ... Voir le document complet
12
Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea
... regions. The initial backbone of the draft genome was assembled with Illu- mina reads using De Bruijn graph-based SOAPdenovo (version ...largest. The gaps within assembled scaffolds were ... Voir le document complet
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