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Sequence data

Open Source for seeds and genetic sequence data: Practical experience and future strategies

Open Source for seeds and genetic sequence data: Practical experience and future strategies

... genetic sequence data, it is important to conduct small-scale experiments (consortia, projects) from which lessons can be ...existing data whereas bilateral agreements with farmers to respect their ...

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A new effective method for estimating missing values
in the sequence data prior to phylogenetic analysis

A new effective method for estimating missing values in the sequence data prior to phylogenetic analysis

... in sequence data and compare it to the two methods available in the PAUP ...for sequence data than the popular NJ method [22], was used in our simulations to reconstruct ...gene data ...

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The Chaperonin-60 universal target is a barcode for bacteria that enables de novo assembly of metagenomic sequence data

The Chaperonin-60 universal target is a barcode for bacteria that enables de novo assembly of metagenomic sequence data

... genome sequence data currently available is influenced by factors such as the cultivability of various taxa, and their relevance to human and animal health, and other well-explored ...metagenomic ...

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Multiple instance learning for sequence data with across bag dependencies

Multiple instance learning for sequence data with across bag dependencies

... for sequence data is to use standard MIL ...of sequence data, the most used technique to transform data to an attribute-value format is to extract motifs that serve as ...a ...

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Grapevine virus T diversity as revealed by full-length genome sequences assembled from high-throughput sequence data

Grapevine virus T diversity as revealed by full-length genome sequences assembled from high-throughput sequence data

... transcriptomic data of the Teroldego variety [ 21 ...the data available on this recently described grape- vine virus indicate significant prevalence and diversity, raising issues on its detectability and ...

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Primary structure of the Streptomyces R61 extracellular DD-peptidase. 2. Amino acid sequence data

Primary structure of the Streptomyces R61 extracellular DD-peptidase. 2. Amino acid sequence data

... The data thus obtained were in excellent agreement with the primary structure of the protein as deduced from the nucleotide sequence of the cloned gene.. Though a weak [r] ...

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Efficient algorithms and data structures for indexing DNA sequence data

Efficient algorithms and data structures for indexing DNA sequence data

... biological data storage, processing and ...genomic data amounts grow faster (double approximately every 7 months according to historical data, and will double every 12 month according to Illumina ...

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An abundance of ubiquitously expressed genes revealed by tissue transcriptome sequence data

An abundance of ubiquitously expressed genes revealed by tissue transcriptome sequence data

... ubiquitously expressed genes appeared to plateau as the number of samples used was increased to the full set of 24 (Figure 1C). The detection threshold used affects the number of genes detected (Table 1), and the number ...

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Detection of long repeat expansions from PCR-free whole-genome sequence data

Detection of long repeat expansions from PCR-free whole-genome sequence data

... A recently discovered hexamer (GGCCCC) repeat expansion in the C9orf72 locus is a major cause of both ALS and frontotempo- ral dementia (DeJesus-Hernandez et al. 2011; Renton et al. 2011; Gijselinck et al. 2012). In ...

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Understanding the phyllosphere microbiome assemblage in grape species (Vitaceae) with amplicon sequence data structures

Understanding the phyllosphere microbiome assemblage in grape species (<em>Vitaceae</em>) with amplicon sequence data structures

... the data normalization methods to detect the differential taxa abun- dance among different ...(RNA-Seq) data are often scattered and have frequent ...

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A De Novo Robust Clustering Approach for Amplicon-Based Sequence Data

A De Novo Robust Clustering Approach for Amplicon-Based Sequence Data

... the data in reasonable ...the sequence order, clustering threshold and structure of the data makes it that the users have no way of knowing whether better Operational Taxonomic Units (OTUs) could ...

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Inference on population history and model checking using DNA sequence and microsatellite data with the software DIYABC (v1.0)

Inference on population history and model checking using DNA sequence and microsatellite data with the software DIYABC (v1.0)

... diploid data and allow making inferences from DNA sequence data (without recombination) in addition or separately to microsatel- lite ...target data set), a feature of ABC ana- lysis that has ...

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Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data

Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data

... phenomic data in GnpIS-coreDB The IWGSC sequence data are linked to genetic and phe- nomic data within the GnpIS information system [ 4 ...key data, also called “pivot data” as ...

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Causal Message Sequence Charts

Causal Message Sequence Charts

... Fig. 18. Data transfer between process 1 and process 2. The last phase of the TCP protocol is connection termination. The connection termination phase uses a four-way handshake. Each side of the connection ...

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Pervasive Attention: 2D Convolutional Neural Networks for Sequence-to-Sequence Prediction

Pervasive Attention: 2D Convolutional Neural Networks for Sequence-to-Sequence Prediction

... Beyond uni-dimensional encoding/decoding. Kalchbrenner et al. ( 2016a ) proposed a 2D LSTM model similar to our 2D CNN for machine trans- lation. Like our model, a 2D grid is defined across the input and output ...

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sequence 3eme   factoriser une expression

sequence 3eme factoriser une expression

... Les expressions B, D, E, H, J et G peuvent être développées, pour souvenirs, vous pouvez regarder le chapitre NC2 développer une expression.. Pour les deux nombres choisis, le résultat [r] ...

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sequence initiation primitives integrale

sequence initiation primitives integrale

... On établit en mécanique que la vitesse instantanée de la cabine est la fonction dérivée de la fonction et que l'accélération instantanée de la cabine est la fonction dérivée de l[r] ...

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Mark my Word: A Sequence-to-Sequence Approach to Definition Modeling

Mark my Word: A Sequence-to-Sequence Approach to Definition Modeling

... a sequence- to-sequence task, rather than a word-to- sequence task: given an input sequence with a highlighted word, generate a con- textually appropriate definition for ...based ...

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OPTIMIR, a novel algorithm for integrating available genome-wide genotype data into miRNA sequence alignment analysis

OPTIMIR, a novel algorithm for integrating available genome-wide genotype data into miRNA sequence alignment analysis

... 6 Centre National de Recherche en Génomique Humaine, Direction de la Recherche Fondamentale, CEA, 91057 Evry, France 7 CEPH, Fondation Jean Dausset, 75011 Paris, France ABSTRACT Next-generation sequencing is an ...

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What is ... an automatic sequence?

What is ... an automatic sequence?

... The sequence s(n) n≥0 = a, b, b, a, b, a, a, b, b, a, a, b, a, b, b, a, . . . is known as the Thue–Morse sequence. It is 2- automatic, since we are reading integers in base 2. Reading the least significant ...

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