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Searching algorithm for type IV secretion system
effectors 1.0: a tool for predicting type IV effectors and
exploring their genomic context
Damien Meyer, Christophe Noroy, Amal Moumène, Sylvain Raffaele,
Emmanuel Albina, Nathalie Vachiery
To cite this version:
Damien Meyer, Christophe Noroy, Amal Moumène, Sylvain Raffaele, Emmanuel Albina, et al.. Search-ing algorithm for type IV secretion system effectors 1.0: a tool for predictSearch-ing type IV effectors and exploring their genomic context. Nucleic Acids Research, Oxford University Press, 2013, 41 (20), pp.9218-9229. �10.1093/nar/gkt718�. �hal-02648279�
Ehrlichia Putative Effector
Hydrophobicity Charge Basicity Domains Homology Score
EPE_1 -1404.3 2 5 Ank_4 Ank-A 8
EPE_2 -776.5 0 4 Ank Repeat Ank-A 7
EPE_3 -243.4 3 5 Coiled-coils ECH_0825 7
EPE_4 -107.0 2 6 - Sid 6
EPE_5 -67.4 4 8 RSTY hydrolaseα/β 6
EPE_6 -8.3 1 4 Ank_4 Ank-A 6
EPE_7 1.7 3 4 Acetyltransf_1 transferaseAcetyl 6
EPE_8 -42.8 -2 4 Coiled-coils BepB 6
EPE_9 -699.2 6 7 RSTY - 5 EPE_10 -244.6 -1 5 Coiled-coilsMLS - 5 EPE_11 -237.6 2 5 DUF3514NLS - 5 EPE_12 446.0 4 6 DUF4131NLS - 5 EPE_13 -161.7 0 5 - Lpg1120 5 EPE_14 -59.0 3 5 MLSNLS - 5 EPE_15 -1183.3 -4 3 NLS - 5 EPE_16 -302.1 8 10 Coiled-coils - 5 EPE_17 -231.6 2 5 Coiled-coils - 5 EPE_18 4 6 RSTYNLS - 5 EPE_19 -955.6 6 7 Coiled-coilsNLS - 5 EPE_20 -25.3 2 9 E-block - 5
EPE_21 -42.3 -2 2 Ank_4 Ank-A 5
EPE_22 -58.4 5 8 Coiled-coilsNLS - 5
