Gene Expression Profiling/methods
Genome-wide identification, phylogenetic analysis, expression profiling, and protein-protein interaction properties of TOPLESS gene family members in tomato
... Expression analysis of SlTPL genes Total RNA extraction, removal of DNA contamination, cDNA generation of eight tomato tissues (root, stem, leaves, bud, flower, mature green fruit, breaker fruit, and red fruit), ...
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Signalling Pathways Involved in Adult Heart Formation Revealed by Gene Expression Profiling in Drosophila
... differential expression between time- points in using modified t-statistic significance analysis of microarrays (SAM) [14] with estimated q-values (false discov- ery rates) of ...differential expression at ...
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Microarray-based understanding of normal and malignant plasma cells.: Gene expression profiling of plasma cells
... 45. Sun RX, Lu ZY, Wijdenes J, Brochier J, Hertog C, Rossi JF, et al. Large scale and clinical grade purification of syndecan-1+ malignant plasma cells. Journal of Immunological Methods 1997;205:73-79. 46. ...
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Gene expression profiling in equine polysaccharide storage myopathy revealed inflammation, glycogenesis inhibition, hypoxia and mitochondrial dysfunctions.
... with methods developed for human muscle were unsuccessful ...GBE1 gene. In adult horses, a new G-to-A mutation within the gene encoding glycogen synthase 1 (GYS1) has recently been observed in ...
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Ethylene signalling receptors and transcription factors over the grape berry development: gene expression profiling
... the gene transcription. Material and Methods P l a n t m a t e r i a l a n d g a s t r e a t - m e n t s : 'Cabernet Sauvignon' grapevines, 30 year old, were grafted on 110 Richter rootstocks and grown in ...
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Exploring Mammalian Genome within Phase-Separated Nuclear Bodies: Experimental Methods and Implications for Gene Expression
... genomic profiling of sequences associated with specific nuclear ...linked gene expression are dynamically affected during embryonic development and cellular differentiation, as well as in ...
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Gene expression profiling of trout regenerating muscle reveals common transcriptional signatures with hyperplastic growth zones of the post-embryonic myotome
... Methods Animals and experimental design Fish used in this study were reared and handled in strict accordance with French and European policies and guidelines of the INRA PEIMA Institutional Animal Care and Use ...
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Gene expression profiling of the tumor microenvironment in human intrahepatic cholangiocarcinoma
... a gene expression pro filing approach using Agilent pangenomic microarrays and total RNA isolated from human ICC samples after laser capture microdissection (LCM) of the normal ...
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Endometrial gene expression profiling in pregnant Meishan and Yorkshire pigs on day 12 of gestation
... Methods Animals All animal use was performed under Iowa State Univer- sity Committee on Animal Care approved protocols. Heat-check positive Yorkshire and Meishan gilts were bred twice to boars of the respective ...
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Transcriptome Profiling in Rat Inbred Strains and Experimental Cross Reveals Discrepant Genetic Architecture of Genome-Wide Gene Expression
... orchestrate gene expression regulation in different structures of gene · gene and gene · environment interactions when fixed homozygous in the genome or when segregating in an F2 ...of ...
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Genome-Wide Characterization and Expression Profiling of the AUXIN RESPONSE FACTOR (ARF) Gene Family in Eucalyptus grandis
... and Methods Identification of ARF gene family in Eucalyptus grandis and chromosomal location The identification procedure is illustrated in ...invalid gene models were eliminated based on gene ...
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Gene Expression Profiling of Solitary Fibrous Tumors
... and Methods Gene Expression Profiling of Solitary Fibrous Tumors Sixteen pre-treatment samples of pathologically confirmed SFT were available for RNA ...
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Conjunctival Inflammatory Gene Expression Profiling in Dry Eye Disease: Correlations With HLA-DRA and HLA-DRB1
... detection methods as classical PCR, qPCR, RNA-Seq, or microarray ( 9 , 18 , 19 ...RNA expression, these techniques suffer from certain disadvantages such as the presence of background ...of gene ...
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Genome-wide identification, phylogenetic analysis, expression profiling, and proteinprotein interaction properties of TOPLESS gene family members in tomato
... Expression analysis of SlTPL genes Total RNA extraction, removal of DNA contamination, cDNA generation of eight tomato tissues (root, stem, leaves, bud, flower, mature green fruit, breaker fruit, and red fruit), ...
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Genome-Wide Characterization and Expression Profiling of the AUXIN RESPONSE FACTOR (ARF) Gene Family in Eucalyptus grandis
... and Methods Identification of ARF gene family in Eucalyptus grandis and chromosomal location The identification procedure is illustrated in ...invalid gene models were eliminated based on gene ...
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Gene expression profiling of human adrenocortical tumors using complementary deoxyribonucleic Acid microarrays identifies several candidate genes as markers of malignancy.
... Results: Gene expression profiling of human adrenocortical tumors: The mRNAs from 57 human adrenocortical tumor samples were hybridized with cDNA arrays carrying the 230 selected ...overall ...
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Gene expression profiling reveals that PXR activation inhibits Hhepatic PPAR alpha activity and decreases FGF21 secretion in male C57Bl6/J mice
... the expression of several genes that correlate with lipogenesis, such as the patatin-like phospholipase domain containing 3 (Pnpla3) and the thyroid hormone-responsive spot 14 (Thrsp or ...thyroid-responsive ...
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Kinome expression profiling and prognosis of basal breast cancers.
... the expression of immune response-related genes, the absence of correlation between the immune meta- gene and lymphocyte infiltration in our cohort and in two independent data sets [5,8] as well as the ...
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Impact of RNA degradation on gene expression profiles: assessment of different methods to reliably determine RNA quality.
... Virginie Copois, Frédéric Bibeau, Caroline Bascoul-Mollevi, Nicolas Salvetat, Patrick Chalbos, Corinne Bareil, Laurent Candeil, Caroline Fraslon,. Emmanuel Conseiller, Virginie Granci, e[r] ...
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Gene expression profiling in sinonasal adenocarcinoma.
... LGALS4 gene codes for the Galectin 4 protein ...LGALS4 expression increases in liver, gastric, breast cancer and mucinous epithelial ovarian cancer whereas it is down-regulated in colon ade- nocarcinoma ...
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