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Computational Sciences Luxembourg

Department of Computational Engineering

Sciences

Computed in Luxembourg Lux

Stéphane P. A. Bordas, ACOME 2017, Vietnam - [email protected] Slides can be downloaded here: http://hdl.handle.net/10993/31487 


See also: https://wwwen.uni.lu/recherche/fstc/computational_sciences

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam
 Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

ComputaPonal Mechanics of Interfaces


with Engineering and Medical ApplicaPons

Stéphane P.A. Bordas 


[email protected]

4

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Large scale

Small scale

6 1

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Large scale

Small scale

7 1

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Large scale

8 1

Discon(nui(es

courtesy: EADS

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Interfaces in prac(cal engineering simula(ons

Interfaces between phases

0.125 mm

100 plies

CMECH 2007, EFM2008 CAS 2009, with Timon Rabczuk and Goangseup Zi

Meshfree methods

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Equilibrium of nano-inhomogenei(es

12

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Keloids

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Keloids

14

Keloid

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Keloids

15

Keloid

weak discontinuity

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Interfaces between different models

IJNME2008, Duddu

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Interfaces between different PDEs

IJNME2008, Duddu, Bordas, Chopp, Moran

Water

Bacteria

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Interfaces between different PDEs

IJNME2008, Duddu, Bordas, Chopp, Moran

Laplace

Poisson

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Interfaces between different scales

IJNME2008, Duddu Biofilms

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Interfaces between different scales / material models

Example: Con(nuum molecular dynamics coupling

IJNME2008, Duddu

CMECH14, IJMSE13 Talebi

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Interfaces between different discre(sa(ons

CMECH2014, CAD2014, CMECH2016, MatCompSim2016, CMAME2017, Nguyen-Vinh Phu http://publications.uni.lu/bitstream/10993/13726/1/phu-meshless.pdf

https://orbilu.uni.lu/bitstream/10993/15234/1/bordasphu.pdf

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M

Institute of Mechanics

A

M

& Advanced Materials

I

Institute of Mechanics and Advanced Materials

[email protected]

Oil extrac(on from shale -

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam


Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

27

Agathos, Chatzi, Ventura, Talaslidis, SPAB: IJNME, CMAME2016, IJNME2017 CMECH17

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam


Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam


Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

(30)

Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam


Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

30

EFM2017 3 part paper - Sutula, Kerfriden, van Dam, Bordas -

funded by Soitec SA

Energy-minimal mul(-crack growth 


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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam


Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

31

IJNME2011, CMS2012, Menk & SPAB funded by Bosch GmbH

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam
 Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

32

A

4.30

A

10

7

2.6

U

Q

0

0.02

0.04

0.06

0.08

0.1

0

20

40

60

80

100

120

140

U

Q

15%

3.4

U

Q

x

c

W

c

1%

25

U

Real-time simulation of cutting during brain surgery

Med. Im. Anal. 2014 Courtecuisse, Cotin, SPAB et al.

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam


Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

Fracture of ‘homogeneous’ materials

34

SPAB and B. Moran, Engineering Fracture Mechanics, 2006
 V.P. Nguyen et al. XFEM C++ Library IJNME, 2007

Industrial applications of extended finite element methods

See also E. Wyart et al, EFM, IJNME, 2008

Question: when should a structure be inspected for flaws?

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Key idea: implement high-level description of finite element

models in the Unified Form Language.

Let algorithms take over the tedious/difficult work of linearisation

and transforming maths into lower-level languages.

Not a toy; scales to huge problems with billions of unknowns on

Top100 supercomputers.

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Problem.

Mathematical

model.

Linearised model.

Numerical method.

Software.

Expertise

.

Algorithmic and suitable for

automation.

}

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam


Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

42

Finite elements for evolving 


discon(nui(es

&

singulari(es

discontinuity

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Free boundary problems

FEM

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Singular elements (Barsoum, 1974)

regular nodes

quarter nodes

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam


Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

51

Finite elements are intrinsically limited for

problems involving

discon(nui(es

&

singulari(es

such as cracks

discontinuity

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Assume we refine the mesh

The enriched area is still made up of 9 elements

(73)

By refining the mesh, the influence of the enrichment

zone on the convergence of the method tends to zero

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Enriching an area independent of the mesh size

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Geometrical enrichment ensures that as the mesh is refined, the

enriched area remains constant

(more nodes become enriched)

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Conditioning issues can be so severe that

the set of equations is unsolvable

Large enrichment zones (see stable GFEM, Banerjee, Babuška and

Agathos 2016, 2017)

For arbitrary enrichment schemes

T-stress - 2nd order terms in Westergaard expansion

MulPple enrichments due to mulPple cracks

(78)

Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam
 Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

Summary

Fracture of homogeneous materials

78

Question: How to control accuracy and simplify/avoid meshing?

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam


Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

Fracture of homogeneous materials

79

K. Agathos et al. IJNME 2016, CMAME 2016, IJNME 2017, CMAME 2017 with Eleni Chatzi and Giulio Ventura

How can we use large enrichment radii?

How can we control conditioning in

large-scale enriched FEM?

How can we use higher order terms in the

expansion?

X. Peng et al. IJNME 2016, CMAME 2017 Enriched Isogeometric Boundary Elements

How to avoid meshing completely

for crack propagation simulations?

(80)

Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam
 Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

80

3D Orthogonalised Cut-off XFEM (Agathos)

A novel form of fixed

volume enrichment

OrthogonalisaPon of

enrichment funcPons

Same condi(oning as FEM.

Enables the use of higher

order terms in fracture

mechanics

Equivalent accuracy to

XFEM with geo. enrichment +

opPmal convergence

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam


Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

83

Agathos, K., E. Chatzi, and SPA Bordas. "Stable 3D extended finite elements with higher order

enrichment for accurate non planar fracture." Computer Methods in Applied Mechanics and

Engineering 306 (2016): 19-46.

Agathos K, Chatzi E, Bordas S, Talaslidis D. A well-conditioned and optimally convergent

XFEM for 3D linear elastic fracture. International Journal for Numerical Methods in

Engineering. 2016 Mar 2;105(9):643-77.

https://orbilu.uni.lu/bitstream/10993/22331/2/paper.pdf

http://orbilu.uni.lu/bitstream/10993/22420/1/presentation.pdf

Agathos K, Ventura G, Chatzi E, Bordas S. Stable 3D XFEM/vector-level sets for non-planar

3D crack propagation and comparison of enrichment schemes. International Journal for Numerical

Methods in Engineering, 2017.

The methodology is described in detail

in these papers

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam
 Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

85

Refine along the “expected” crack path…

(Goal oriented) adap=ve computa=onal fracture


use h-refinement

Y. Jin, O. Pierard, et al. Comput. Methods Appl. Mech. Engrg. 318 (2017) 319–348 O.A. González-Estrada et al. Computers and Structures 152 (2015) 1–10

O.A. González-Estrada et al. Comput Mech (2014) 53:957–976 C. Prange et al. IJNME 91.13 (2012): 1459-1474.

M. Duflot, SPAB, IJNME 2007, CNME 2007, IJNME 2008. J-J. Ródenas Garcia, IJNME 2007

F.B. Barros, et alIJNME 60.14 (2004): 2373-2398.

Before: mesh “finely” in the region where the crack is “expected” to propagate

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam
 Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

Much beker… adapt the discre(sa(on locally

Fracture of homogeneous materials: error

es=ma=on and adap=vity

86

Y. Jin, O. Pierard, et al. Error-controlled adaptive extended finite element method for 3D linear elastic crack propagation Comput. Methods Appl. Mech. Engrg. 318 (2017) 319–348

M. Duflot, SPAB, IJNME 2007, CNME 2007, IJNME 2008.

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Discre(za(on: XFEM

Extended Finite Element Method (XFEM)

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Case study II. Plate with 300 cracks

ver(cal extension BCs

Fracture process

Energy-minimal crack growth using XFEM

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Ver(cal extension of a plate with 300 cracks

Example #1

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam
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92

More cracks?… 3D? …

Phase field/thick level sets

With Danas Sutula and Nguyen Vinh Phu (Monash)


9TH Australasian Congress on Applied Mechanics (ACAM9)

27 - 29 November 2017

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam


Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

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With Danas Sutula and Nguyen Vinh Phu (Monash)


9TH Australasian Congress on Applied Mechanics (ACAM9)

27 - 29 November 2017

[email protected]

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam


Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam


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95

With Danas Sutula and Nguyen Vinh Phu (Monash)


9TH Australasian Congress on Applied Mechanics (ACAM9)

27 - 29 November 2017

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam
 Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

97

Handling (complex) interfaces numerically

Coupling, or decoupling?

Question: When are we better off coupling/decoupling the geometry from the field

approximation?

no m

esh

calculation

stress analysis

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam


Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

99

Isogeometric analysis

Idea: Hughes et al. 2005. Do not

discard geometric information by

creating a mesh. Use the CAD

information to solve the finite element

problem.

calculation

stress analysis

mesh

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam


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100

Isogeometric analysis

Idea: Hughes et al. 2005. Do not

discard geometric information by

creating a mesh. Use the CAD

information to solve the finite element

problem.

direct calculation

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam


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101

Isogeometric analysis

Idea: Hughes et al. 2005. Do not

discard geometric information by

creating a mesh. Use the CAD

information to solve the finite element

problem.

stress analysis

CAD: described by NURBS

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam
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102

Isogeometric analysis: limita(ons

Geometry

For shell-like domains

For volumes (needs volume parameterisation)

Coupling between multiple patches (Nitsche, Mortar…)

Adaptivity

Global refinement - cannot refine field without refining geo…

Local refinement (not with NURBS)… (PH)T-splines…

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam
 Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

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Mesh refinement in IGA

Using NURBS, 


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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam
 Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

104

Handling (complex) interfaces numerically

Coupling

Question: How can we fully benefit from the “IGA” concept?

Refine the field independently from the geometry

Suppress the mesh generation and regeneration completely

no m

esh

calculation

stress analysis

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam


Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

Handling (complex) interfaces numerically

Coupling geometry and field approxima=on

Question: How can we fully benefit from the “IGA” concept?

Refine the field independently from the geometry

Isogeometric Finite Elements

For shell-like domains

For volumes (needs volume

parameterisation)

Geometry Independent Field

approximaTion

(GIFT)

Super/Sub-geometric

[REF] Weakening the tight coupling between geometry and simulation in isogeometric

analysis: from sub- and super- geometric analysis to Geometry Independent Field

approximaTion (GIFT), IJNME, 2017, submitted [preprint available on arXiv]

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam


Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

Handling (complex) interfaces numerically

Coupling geometry and field approxima=on

Question: How can we fully benefit from the “IGA” concept?

Refine the field independently from the geometry

[REF] Weakening the tight coupling between geometry and simulation in isogeometric

analysis: from sub- and super- geometric analysis to Geometry Independent Field

approximaTion (GIFT), IJNME, 2017, submitted [preprint available on arXiv]

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam


Slides can be downloaded here: hGp://hdl.handle.net/10993/31487- legato-team.eu - You can download these slides here: hGp://hdl.handle.net/10993/31487

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam
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Geometry Independent Field approximaTion

(GIFT)

Conclusions

Tight link between CAD and analysis

The same basis functions, which are used in CAD to represent

the geometry, are used in the IGA as shape functions to

approximation the unknown solution

Geometry is exact at any stage of the solution refinement

process

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Deep-brain sPmulaPon

Courtesy Alexandre Bilger, post-doc in the Legato team, PhD thesis, Inria, 2014

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam
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Interfaces in surgical simulaPon

CuGng and Needle InserAon

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http://orbilu.uni.lu/handle/10993/29846 http://orbilu.uni.lu/handle/10993/30937

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Stéphane P. A. Bordas, ACOME Plenary Lecture 2017, Vietnam
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Interfaces in surgical simulaPon

Real-Ame adapAve methods for cuGng 


and needle inserAon

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http://orbilu.uni.lu/handle/10993/29846 http://orbilu.uni.lu/handle/10993/30937

H. Courtecuisse et al. Medical Image Analysis, 2014 P.H. Bui et al. IEEE T. Biomed Eng. 2017 & Frontiers in Surgery, 2017

Question: how can we simulate cutting/fracture in real time using implicit time stepping?

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Modelling and simulaPon

physical problem

mathematical

model

discretisation

numerical solution

model error

discretisation error

numerical error

total error

validation: are we

solving the

right

problem?

verification: are we

solving the problem

right?

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Model reduction

error I

Model reduction

error II

Can we solve

the problem fast

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Questions asked

What is the influence of uncertainties in

material parameters?

What probability distributions are suitable

for material parameters?

What is the best model given experimental

data?

Can we update models and parameters in

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Random Fields

Two realisations of RF, with a log-normal distribution,

for the parameter C

1

(in MPa).

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‣Different methods: Karhunen

Loève expansion [Adler

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Brain deformation with random parameters 1 MC realisation.

Confidence interval 95% MC simulations.

Stochastic FE analysis of brain deformation

Numerical results (8 RV, Holzapfel model)

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Numerical results: convergence

Fig. Center of the sphere: expected

value of the displacement in the x direction as

a function of Z.

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Numerical results (8 RV, Holzapfel model)

ML Monte-Carlo technique: ML-PCE

Histogram (MC and MC-PCE methods).

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Global sensitivity analysis

Quantity of interest: displacement magnitude of the target.

120

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Q: What can we infer about the material parameters inside

the domain, just from displacement observations on the

outside?

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Bayesian testbed for characterising

hyperelastic materials

Uncertain and partial data

Experimental results

posterior

(x

| y)

likelihood

(y

| x)

prior

(x )

Parameter recovery

Quantification of uncertainty

Γprior

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Bayes Theorem

posterior

(x

| y)

likelihood

(y

| x)

prior

(x)

Goal: Given the observations, find the posterior

distribution of the unknown parameters.

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Key idea: implement high-level description of finite

element models in the Unified Form Language.

Let algorithms take over the tedious/difficult work of

linearisation and transforming maths into

lower-level languages.

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Prior

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Updates

Bayesian Inference

Feedback

Posterior Distribution

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Force-displacement

in vivo Data

in vivo Data

Mechanical

characterisation

of skin phantoms

and structures

Error-control

for finite

heterogeneous

Elasticity FE

simulations

DIC

in vitro data

Fast, adaptive

and

error-controlled FE

solutions

Model selection

Uncertainty

Quantification on

Geometry,

Boundary Conditions

Material Parameters

Best model, parameters, stochastic

inverse problems, sensitivity analysis

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Thank you for your attention!

You can download these slides here

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Innovative Training Network RAINBOW

funded by Horizon 2020

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What makes Data Science

different?

http://hdl.handle.net/10993/30235

Energy-minimal crack growth

http://hdl.handle.net/10993/29414

Uncertainty quantification for

soft tissue biomechanics

http://orbilu.uni.lu/handle/10993/28618

http://orbilu.uni.lu/handle/10993/30946

Real-time simulation and

error control

http://orbilu.uni.lu/handle/10993/29846

http://orbilu.uni.lu/handle/10993/30937

Bayesian parameter

identification in mechanics

http://orbilu.uni.lu/bitstream/10993/29561/3/

template.pdf

http://orbilu.uni.lu/bitstream/

10993/28631/1/1606.02422v4.pdf

http://orbilu.uni.lu/handle/10993/28631

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Shape optimisation directly from CAD

https://publications.uni.lu/bitstream/10993/17838/1/IGABEMopt3Dpaper.pdf https://publications.uni.lu/bitstream/10993/18266/1/IGABEMopt2Dpaper.pdf https://orbilu.uni.lu/bitstream/10993/17098/1/dual_igabem5-space.pdf

http://orbilu.uni.lu/bitstream/10993/22289/1/igabem3d_01doubleSpace.pdf https://publications.uni.lu/bitstream/10993/17099/1/abstract_acomen.pdf

Stress analysis without meshing

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