• Aucun résultat trouvé

AgaPTS GamPTS

N/A
N/A
Info
Télécharger
Protected

Academic year: 2021

Partager "AgaPTS GamPTS"

Copied!
1
0
0

Chargement.... (Voir le texte intégral maintenant)

Texte intégral

(1)

fig|910310.3.peg.2096 [Turicibacter sp. HGF1]

fig|702450.3.peg.1888 [Turicibacter sp. PC909]

fig|521003.7.peg.403 [Collinsella intestinalis DSM 13280]

fig|742742.3.peg.747 [Collinsella tanakaei YIT 12063]

1.000

fig|718252.3.peg.1301 [Faecalibacterium prausnitzii L2-6]

fig|457396.3.peg.2033 [Clostridium sp. 7_2_43FAA]

fig|545697.3.peg.583 [Clostridium celatum DSM 1785]

0.984 0.973

fig|428126.7.peg.719 [Clostridium spiroforme DSM 1552]

fig|1203606.4.peg.2202 [Butyricicoccus pullicaecorum 1.2]

fig|658081.3.peg.273 [Lachnospiraceae bacterium 1_1_57FAA]

fig|665950.3.peg.317 [Lachnospiraceae bacterium 3_1_46FAA]

fig|665951.3.peg.519 [Lachnospiraceae bacterium 8_1_57FAA]

fig|411460.6.peg.605 [Ruminococcus torques ATCC 27756]

0.827

fig|658659.3.peg.3333 [Erysipelotrichaceae bacterium 3_1_53]

fig|908340.3.peg.3539 [Clostridium sp. HGF2]

fig|457422.3.peg.2854 [Erysipelotrichaceae bacterium 2_2_44A]

fig|469614.3.peg.816 [Erysipelotrichaceae bacterium 6_1_45]

fig|658657.3.peg.3465 [Erysipelotrichaceae bacterium 21_3]

fig|428127.7.peg.1988 [Eubacterium dolichum DSM 3991]

fig|658659.3.peg.3328 [Erysipelotrichaceae bacterium 3_1_53]

fig|469614.3.peg.811 [Erysipelotrichaceae bacterium 6_1_45]

fig|908340.3.peg.3544 [Clostridium sp. HGF2]

fig|457422.3.peg.2849 [Erysipelotrichaceae bacterium 2_2_44A]

fig|658657.3.peg.3470 [Erysipelotrichaceae bacterium 21_3]

0.999

fig|552396.3.peg.690 [Erysipelotrichaceae bacterium 5_2_54FAA]

fig|457402.3.peg.2432 [Eubacterium sp. 3_1_31]

fig|518637.5.peg.25 [Eubacterium biforme DSM 3989]

fig|552396.3.peg.686 [Erysipelotrichaceae bacterium 5_2_54FAA]

fig|457402.3.peg.2436 [Eubacterium sp. 3_1_31]

0.997 1.000 0.977

0.796 0.998 0.953

fig|500638.3.peg.1693 [Edwardsiella tarda ATCC 23685]

fig|521000.6.peg.1203 [Providencia rettgeri DSM 1131]

fig|500637.6.peg.6690 [Providencia rustigianii DSM 4541]

fig|500637.6.peg.400 [Providencia rustigianii DSM 4541]

fig|471881.3.peg.848 [Proteus penneri ATCC 35198]

fig|1125694.3.peg.2023 [Proteus mirabilis WGLW6]

1.000

fig|469613.3.peg.2716 [Enterobacteriaceae bacterium 9_2_54FAA]

fig|1002364.3.peg.3406 [Hafnia alvei ATCC 51873]

fig|500640.5.peg.3817 [Citrobacter youngae ATCC 29220]

fig|469598.5.peg.1073 [Escherichia sp. 3_2_53FAA]

fig|364106.8.peg.3537 [Escherichia coli UTI89]

fig|749549.3.peg.1975 [Escherichia coli MS 198-1]

fig|749546.3.peg.2086 [Escherichia coli MS 185-1]

fig|749550.3.peg.1063 [Escherichia coli MS 200-1]

fig|749528.3.peg.4105 [Escherichia coli MS 45-1]

fig|386585.9.peg.4195 [Escherichia coli O157:H7 str. Sakai]

fig|749537.3.peg.2522 [Escherichia coli MS 115-1]

fig|749538.3.peg.2174 [Escherichia coli MS 116-1]

fig|749544.3.peg.926 [Escherichia coli MS 175-1]

fig|749527.3.peg.2789 [Escherichia coli MS 21-1]

fig|679207.4.peg.2595 [Escherichia coli MS 107-1]

fig|749545.3.peg.3375 [Escherichia coli MS 182-1]

fig|749548.3.peg.2783 [Escherichia coli MS 196-1]

fig|431946.3.peg.3111 [Escherichia coli SE15]

fig|749532.3.peg.1634 [Escherichia coli MS 78-1]

fig|749540.3.peg.1427 [Escherichia coli MS 146-1]

fig|749531.3.peg.2563 [Escherichia coli MS 69-1]

fig|679202.3.peg.1021 [Escherichia coli MS 85-1]

fig|749533.3.peg.2280 [Escherichia coli MS 84-1]

fig|796392.4.peg.1906 [Escherichia coli MS 79-10]

fig|409438.11.peg.3594 [Escherichia coli SE11]

fig|457401.3.peg.3047 [Escherichia sp. 4_1_40B]

fig|511145.12.peg.3234 [Escherichia coli str. K-12 substr. MG1655]

fig|679204.3.peg.874 [Escherichia coli MS 145-7]

fig|679205.4.peg.349 [Escherichia coli MS 124-1]

fig|679206.4.peg.1520 [Escherichia coli MS 119-7]

fig|1127356.4.peg.2231 [Escherichia coli 4_1_47FAA]

1.000 0.057

fig|749518.3.peg.2181 [Enterococcus faecalis TX2134]

fig|749516.3.peg.1473 [Enterococcus faecalis TX1346]

fig|749491.3.peg.470 [Enterococcus faecalis TX2137]

fig|525278.3.peg.2213 [Enterococcus faecalis TX1322]

fig|657310.3.peg.2027 [Enterococcus sp. 7L76]

fig|749514.3.peg.2011 [Enterococcus faecalis TX1341]

fig|749515.3.peg.1079 [Enterococcus faecalis TX1342]

fig|749494.3.peg.161 [Enterococcus faecalis TX4244]

fig|469616.3.peg.500 [Fusobacterium mortiferum ATCC 9817]

fig|500638.3.peg.2064 [Edwardsiella tarda ATCC 23685]

fig|471874.6.peg.3063 [Providencia stuartii ATCC 25827]

fig|469613.3.peg.35 [Enterobacteriaceae bacterium 9_2_54FAA]

fig|1002364.3.peg.905 [Hafnia alvei ATCC 51873]

0.511 1.000

fig|1002368.3.peg.1542 [Yokenella regensburgei ATCC 43003]

fig|566551.4.peg.218 [Cedecea davisae DSM 4568]

fig|500639.8.peg.3738 [Enterobacter cancerogenus ATCC 35316]

fig|469595.3.peg.2945 [Citrobacter sp. 30_2]

fig|500640.5.peg.3810 [Citrobacter youngae ATCC 29220]

fig|749540.3.peg.1419 [Escherichia coli MS 146-1]

fig|749544.3.peg.758 [Escherichia coli MS 175-1]

fig|749548.3.peg.2791 [Escherichia coli MS 196-1]

fig|511145.12.peg.3228 [Escherichia coli str. K-12 substr. MG1655]

fig|749538.3.peg.987 [Escherichia coli MS 116-1]

fig|457401.3.peg.3055 [Escherichia sp. 4_1_40B]

fig|679202.3.peg.1014 [Escherichia coli MS 85-1]

fig|749533.3.peg.3488 [Escherichia coli MS 84-1]

fig|796392.4.peg.1899 [Escherichia coli MS 79-10]

fig|749532.3.peg.1627 [Escherichia coli MS 78-1]

fig|749531.3.peg.2556 [Escherichia coli MS 69-1]

fig|749528.3.peg.4098 [Escherichia coli MS 45-1]

fig|749550.3.peg.1055 [Escherichia coli MS 200-1]

fig|749549.3.peg.1968 [Escherichia coli MS 198-1]

fig|749547.3.peg.1097 [Escherichia coli MS 187-1]

fig|749546.3.peg.2093 [Escherichia coli MS 185-1]

fig|749545.3.peg.3368 [Escherichia coli MS 182-1]

fig|679204.3.peg.867 [Escherichia coli MS 145-7]

fig|679205.4.peg.356 [Escherichia coli MS 124-1]

fig|679206.4.peg.1513 [Escherichia coli MS 119-7]

fig|749537.3.peg.496 [Escherichia coli MS 115-1]

fig|679207.4.peg.2602 [Escherichia coli MS 107-1]

fig|1127356.4.peg.2223 [Escherichia coli 4_1_47FAA]

fig|469598.5.peg.1080 [Escherichia sp. 3_2_53FAA]

fig|386585.9.peg.4187 [Escherichia coli O157:H7 str. Sakai]

fig|409438.11.peg.3587 [Escherichia coli SE11]

fig|749527.3.peg.2781 [Escherichia coli MS 21-1]

fig|431946.3.peg.3104 [Escherichia coli SE15]

fig|364106.8.peg.3530 [Escherichia coli UTI89]

0.963 0.211 0.959 0.733 1.000

fig|742820.3.peg.1747 [Streptococcus anginosus 1_2_62CV]

fig|469609.3.peg.59 [Streptococcus sp. 2_1_36FAA]

fig|1203590.3.peg.1444 [Streptococcus sp. HPH0090]

0.999 0.999

fig|445975.6.peg.129 [Collinsella stercoris DSM 13279]

0.000

fig|665945.3.peg.852 [Lactobacillus sp. 7_1_47FAA]

fig|324831.13.peg.117 [Lactobacillus gasseri ATCC 33323]

fig|257314.6.peg.129 [Lactobacillus johnsonii NCC 533]

0.989

fig|1078083.3.peg.1677 [Staphylococcus sp. HGB0015]

fig|742813.4.peg.1811 [Enterococcus saccharolyticus 30_1]

fig|749491.3.peg.304 [Enterococcus faecalis TX2137]

fig|749494.3.peg.1650 [Enterococcus faecalis TX4244]

fig|749516.3.peg.1838 [Enterococcus faecalis TX1346]

fig|749515.3.peg.2517 [Enterococcus faecalis TX1342]

fig|749514.3.peg.1920 [Enterococcus faecalis TX1341]

fig|749513.3.peg.2414 [Enterococcus faecalis TX1302]

fig|749518.3.peg.1255 [Enterococcus faecalis TX2134]

fig|525278.3.peg.300 [Enterococcus faecalis TX1322]

fig|491074.3.peg.435 [Enterococcus faecalis TX0104]

fig|657310.3.peg.238 [Enterococcus sp. 7L76]

0.941 0.899

fig|862514.3.peg.1200 [Pediococcus acidilactici DSM 20284]

fig|563194.3.peg.190 [Pediococcus acidilactici 7_4]

fig|862514.3.peg.1201 [Pediococcus acidilactici DSM 20284]

fig|568703.30.peg.340 Lactobacillus rhamnosus GG (Prj:40637)[]

fig|525361.3.peg.1788 [Lactobacillus rhamnosus LMS2-1]

fig|1002365.5.peg.430 [Lactobacillus rhamnosus ATCC 21052]

fig|537973.8.peg.2335 [Lactobacillus paracasei subsp. paracasei 8700:2]

fig|525337.3.peg.1132 [Lactobacillus paracasei subsp. paracasei ATCC 25302]

fig|543734.4.peg.278 [Lactobacillus casei BL23]

0.995 0.873 0.847 0.712

0.1

Figure S6. Maximum-likelihood tree for EIIC subunits of the AgaPTS, GamPTS, and GnbPTS. Functions are shown by colors. The SEED identifiers for proteins are shown; for their sequences, see the file Sequences S1 in the Supplementary materials. Genome names are shown in brackets.

AgaPTS GamPTS

GnbPTS

GamPTS

AgaPTS

AgaPTS AgaPTS

GamPTS

GamPTS

Références

Télécharger maintenant ( PDF - 1 Page - 405.89 KB )

Documents relatifs

Endogenous Dionyvirus sequences are widespread in plant genomes

Mapping of endogenous Dionyvirus sequences was achieved in the fully sequenced genomes of grape, poplar, peach and rice, allowing for the first time the study of the

Endogenous Dionyvirus sequences are widespread in plant genomes

siRNAs homologous to endogenous Dionyvirus species were identified in host plants and mapped along reconstituted viral genomes, providing evidence that the expression of such

Endogenous caulimovirid sequences are widespread in plant genomes

Endogenous Dionyvirus sequences belonging to distinct viral species were also identified in single host plants, showing that endogenization of viral sequences is a common phenomenon

RhaB FucA

identifiers for proteins are shown; for their sequences, see the file Sequences S1 in the Supplementary materials.. Genome names are shown

Figure S4.

The SEED identifiers for proteins are shown; for their sequences, see the file Sequences S1 in the..

The connectivity in resources for student-engineers: the case of resources for teaching sequences

There are strong connections between concepts (convergence/divergence, limit of a sequence, function, upper/lower bound, recursive sequences). The tasks and activities propose

for their sequences, see the file Sequences S1 in the Supplementary materials.

The domain structures of the proteins are labelled with

UbiA MenA

The SEED identifiers for proteins are shown; for their sequences, see the file Sequences S1 in the Supplementary materials..