HAL Id: hal-01019609
https://hal.archives-ouvertes.fr/hal-01019609
Submitted on 3 Jun 2020
HAL is a multi-disciplinary open access archive for the deposit and dissemination of sci- entific research documents, whether they are pub- lished or not. The documents may come from teaching and research institutions in France or abroad, or from public or private research centers.
L’archive ouverte pluridisciplinaire HAL, est destinée au dépôt et à la diffusion de documents scientifiques de niveau recherche, publiés ou non, émanant des établissements d’enseignement et de recherche français ou étrangers, des laboratoires publics ou privés.
Identification of candidate polymorphism in a QTL region by combining eQTL mapping with NGS data
Pierre-François Roux, Yuna Blum, Colette Désert, Anis Djari, Diane Esquerre, Elisabeth Le Bihan-Duval, Bertrand Bed’Hom, Pascale Le Roy,
Frédéric Lecerf, Marco Moroldo, et al.
To cite this version:
Pierre-François Roux, Yuna Blum, Colette Désert, Anis Djari, Diane Esquerre, et al.. Identification of candidate polymorphism in a QTL region by combining eQTL mapping with NGS data. 64th Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2013, Nantes, France. pp.300.
�hal-01019609�
011 3445 6 78
94 9 9 !" #$ #%$ !" "$ &#' ()#*&+ ,)$ $ "$ -./$ *0 #$ 1($ !#)1 0$ -./$ )"&& 0$ 2 +$ 345$ ""
67 87 9 :;<=
>?@? 9 A7 9 BC <D
>?@?E? 9 F7 9 GHIJKL
>?@?E? 9 M7 9 GN OKP
Q? 9 G7 9 RIS<JKKJ
T? 9 R7 9 UJ9 BP VOWX G<YOC
Z? 9 B7 9 BJ[\ V;D
]? 9 67 9 UJ9 :;^
>?@? 9 87 9 UJ_JK`
>?@? 9 a7 9 a;K;C [;
b? 9 c7 9 aOKL VJ^
b? 9 F7 9 dC ;ee
Q? 9 c7 9 UOfOKKP f<J
>?@?E9 OW[9 g7 9 GJDJ<KJ
>?@>
MfK;_ODe<I9 g<JIL ? 9 ha:>EQb9 6JfOIJ? 9 ETiii9 :JWWJI? 9 8KOW_J? 9
@j k:M? 9 ha:>EQb9 6JfOIJ? 9 ETTli9 cOP WL X mP C C JI? 9 8KOW_J? 9
EhWP YJKIP L H9 R<K ;eHJWWJ9 [J9 BK JL OfWJ? 9 hRB? 9 ETiii9 :JWWJI? 9 8KOW_J? 9
Qj k:M? 9 cj mRkMR? 9 E>E@i9 FOIL OWJL 9 n;C ;IOW? 9 8KOW_J? 9
Tj k:M? 9 mRkgnghU? 9 E>E@i9 FOIL OWJL 9 n;C ;IOW? 9 8KOW_J? 9
Zj k:M? 9 h:bE9 :J_VJK _VJI9 MYP _;C JI? 9 E]Ebi9 k;<oP C C ^? 9 8KOW_J? 9
]j k:M? 9 ha:>E>E9 mMBj ? 9 ]bETi9 p;<^X JWX p;IOI? 9 8KOW_J? 9
b
j k:M? 9 ha:>E>E9 mMBj ? 9 F:B9 mMGj R? 9 ]bETi9 p;<^X JWX p;IOI? 9 8KOW_Jq 9 eP JKKJX ` KOW_;P I7 K;<=rKJWWJI7 P WKO7 ` K s tu v wx yu yv z{|} u ~u yu u tv x u tx u wu x x tu v u w v x x tu u v x tu {x yx v |u x tu u wx tu { } u x tx tu wv x u tu yyx tu t{u ~w u tu yzt x tu {v u v u
x tu u yyx u x tu t |yx yu tu z u v v |u wx tu {yx tu ~x v wu {x t u v u ~x wv u yu v wu v v u wtv |} u ~u x {tv x {u u u x ty u |x tu zv u wv x u u x tu tu v wyu u x ty} u
~u x {tv x {u tu u v x tu } u yzyv x tu v wv u zy u zv v x tyu zt{ |x tu u ~ u v {u tu
¡¢ £¤¥ ¦§ ¦¨ © § ª ¢« § ¥£¬¢ ª¦ ¦ ®¯¦§ ¥« °¨ ©
¢« § ¥£¬¢ ®¯¦§ ª ª« ° ¢ ¢ ¦® § ± ¦§ ¢¨ ©ª ª ¢ § ¦« § ¦ ² ³§ ¦«
u wyu yz yyx ´u v yu ~{u zyu v u {z u v wu tz u u t{x {v u tyu x tu v wu u u x ty u µtu
u v wu ~yu {x tu u v | u | yu ¶ · } u ~ u t~tu u x v yu x x v x tu x tu v v |u x {yu
± ¢°§ ª¢ ¢ ¸ ¨ § ª § © ¥£¬¢ ¦¢¢ ¦§ § § ª ¢ © ® ¢¢¢ ¦ ² § ª® ©¦¢ « ¦§
x tu v wu v x tu | u v |v x u {x t u wyu v ~u y ´v x tyu u v wyu v ~u ¹º»yu x tu u yv tu
¦ ¦§ ®³§ ¦§ ¢ ¢¯¢ ±« ² ¦ ¯¢ § ° ³ ¢ª® ¼ª ¢ ¦« ¦¯¯ ¦ª¨ ®± £¤¥ ¦
u t{u u x t} u z {u u x {u v u x {tv x |u t{x {v u zv v x tyu u t|u u v x v u x tu t|u y x y u ¹ u x zu t{u µ u ½z u tv x zv {u z |u v u v wx yu ~
¾$ #¿' $ )+#$ "' ' #2,$ "!!À*"$ !" #$ #%$ Á($ "!,#*,$ 2 + $ &#&À' " #,
a7 9 kJ<[P L I_VÂ;
>? 9 :7 9 Ã;W9 kP J[JKVÄ<IJKW
>? 9 Å7 9 cP fWJKX ÅOIC JK
@? 9 F7 9 8C <K^
@? 9 a7 9 8KP I_VÂWJ_VL
>?E? 9 n7 9 UJJÆ
E? 9 R7 9 p;WOI
Q?T? 9 a7 c7 9 dVOL ÂOK
T? 9 Å7 Ç7 9 :OO[IDO
T9 OW[9 c7 9 :P J[JK
>>
MfK;I_;eJ9 UP JÆJ` JC [X 6;IP J<=9 È MU6X ÅOKOIÉ ? 9 cÊP II9 kOL P ;WOC 9 cL <[9 8OKD? 9 UJI9 U;WfIX 6KHI? 9 >Tbi9 MYJW_VJI? 9 cÊP L oJKC OW[? 9
@c_V;;C 9 ;` 9 MfKP _<C L <KOC 9 8;KJIL 9 OW[9 8;;[9 c_P JW_JI? 9 UÄWffOIIJ9 bT? 9 EiT@9 Ë;C C P Â;` JW? 9 cÊP L oJKC OW[? 9
E
hWP YJKIP L ^9 ;` 9 BJKW? 9 j WIL P L <L J9 ;` 9 mJWJL P _I9 ÃJL I<P IIJ9 8O_<C L ^? 9 BKJDfOKL JWIL KOIIJ9 >ilO? 9 Eii>9 BJKW? 9 cÊP L oJKC OW[? 9
Q