GreenPhyl : Phylogenomic resources for comparative and functional genomics

In addition, total tree volume estimates, based on the proposed models, were compared to existing total stem volume tables and the combined variable equation of Spurr ( 1952 ) which

The problematic of rice hinges on this crop’s high water requirements and good adaptation to excess water, providing remarkable sustainability and productivity

This project is included in the ARCAD project (Agropolis Resource Center for Crop Conservation, Adaptation and Diversity), a flagship project funded by

The major innovation of OryGenesDB 2008, besides updating the data and tools, is a new tool, Orylink, which was developed to speed up rice functional genomics by taking advantage of

Each sequence stored in GreenPhylDB is accessible through a specific page that contains sequence information such as TIGR or TAIR sequence ID and annotations, cross references

We aligned to a rice genome assembly 503 QTLs for fifty-six traits including measures of most aspects of plant growth and economic yield and its components, root characteristics,

I-GOST (Iterative GreenPhyl Orthologous Search Tool) is a fast and user friendly comparative genomic program using a phylogeny-based method to infer orthologs and paralogs in

1 getInfoByGeneId OryGenesDB Gene id(s) Full record 2 getFSTbyGeneId OryGenesDB Gene id(s) FST id(s) 3 getGeneIdByLocation OryGenesDB Location Gene id(s) 4