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Implicit active contours for ultrasound images segmentation driven by phase information and local

maximum likelihood

Ahror Belaid, Djamal Boukerroui, Yves Maingourd, Jean-Françoise Lerallut

To cite this version:

Ahror Belaid, Djamal Boukerroui, Yves Maingourd, Jean-Françoise Lerallut. Implicit active con- tours for ultrasound images segmentation driven by phase information and local maximum likelihood.

8th International Symposium on Biomedical Imaging (ISBI’11), Mar 2011, Chicago, Illinois, France.

pp.630-635. �hal-00586401�

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IMPLICIT ACTIVE CONTOURS FOR ULTRASOUND IMAGES SEGMENTATION DRIVEN BY PHASE INFORMATION AND LOCAL MAXIMUM LIKELIHOOD

A. Belaid

1

, D. Boukerroui

1

, Y. Maingourd

2

and J-F. Lerallut

1

1

Heudiasyc, UMR CNRS 6599, Universit´e de Technologie de Compi`egne, France

2

Pediatric ´ Echocardiographic Center, CHU Amiens, France

ABSTRACT

This paper presents a new method in a variational level set framework for ultrasound images segmentation. The conven- tional intensity gradient based methods have had limited suc- cess on ultrasound images. Phase based methods, which are theoretically intensity-invariant, offer a good alternative. The proposed approach uses a speed term based on local phase de- rived from the monogenic signal. In order to confront more the speckle noise and local changes of intensity, the proposed phase based geodesic active contours term is combined with a new local maximum likelihood region term. A Rayleigh probability distribution is considered to model the B-mode ultrasound images intensities. Preliminary results show that the proposed model is robust to attenuation and captures well the low contrast boundaries.

Index Terms— Echocardiography, Level set segmenta- tion, Local phase, Monogenic signal, Maximum likelihood.

1. INTRODUCTION

Ultrasound imaging represents one of the most popu- lar exploration technique commonly used in many diagnos- tic and therapeutic applications. It has many advantages:

it is non-invasive, provides images in real time and re- quires lightweight material. However, ultrasound B-scan images segmentation is particularly difficult mainly due to the low signal-to-noise ratio, low contrast and high amounts of speckle. This image texture, or speckle, is a correlated and multiplicative noise that inherently occurs in all types of coherent imaging systems. Hence, it makes modeling diffi- cult as its statistics depend on the density and on the type of scatterers in the tissues (see e.g., [1]). All these characteris- tics make segmentation difficult and therefore complicate the diagnosis task [2].

In this study we refer to echocardiographic data. It is known that echocardiography has been one of the driving ap- plication areas of medical ultrasound and the literature on

Manuscript received November 11, 2010. This work was supported by a grant of the Regional Council of Picardie and European Union / FEDER.

E-mail:{ahror.belaid, djamal.boukerroui, jean-francois.lerallut}@utc.fr, maingourd.yves@chu-amiens.fr.

methods for automatically segmenting and tracking the left ventricle is extensive. As it has been pointed in [2], the most popular approach has been to treat echocardiographic endo- cardial segmentation as a contour finding approach. This is not straightforward as the contrast around the left ventricle chamber boundaries varies, depending on its relative orien- tation to the transducer direction, and to attenuation. Thus, conventional intensity gradient-based methods have had lim- ited success on typical clinical images. To avoid this draw- back, local phase and local image statistics based approaches offer a good alternative, since they make the approach robust to attenuation artifacts. It is within this framework that we propose an alternative in this paper.

Several approaches have been reported in the literature for automated or semiautomated border detection from ultra- sound images. For instance, statistical models, arguing that these were more appropriate because of the significant noise and missing boundaries of ultrasound images, have been ex- tensively used [1], [2]. For this reason, several probability density functions were used to model image gray levels statis- tics [3, 4, 5, 6]. Unfortunately, segmentation models driven by global image statistics are not robust to intensity inhomogene- ity and, therefore, are not ideal for ultrasound images. More recent techniques attempt to overcome the difficulties caused by intensity inhomogeneities, by using local region informa- tion [7, 8, 9, 10].

On the other hand, the local phase based processing has attached a lot of attention in image analysis. Mulet-Parada and Noble [11] were the first to successfully use the local phase information on echocardiographic images. Some phase based level set segmentation methods on medical applications can be found in the literature [12, 13, 14, 15].

This paper concerns the development of a novel seg- mentation method of the left ventricle within the level set framework. It uses local phase information derived from the monogenic signal [16, 17]. Our idea is to use a novel speed function, which combines a phase based edge term and a Maximum Likelihood (ML) local region based term. To model gray level behavior of ultrasound images, the classical Rayleigh probability distribution is considered.

In the next section, we describe the monogenic edge de- tection measure, called Monogenic Feature Asymmetry . The

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proposed segmentation method is presented in Section 3. Sec- tion 4 shows preliminary experimental results on real and syn- thetic data. Section 5 provides a discussion followed by some concluding remarks.

2. BACKGROUND MATERIALS 2.1. Monogenic signal

One of the popular methods to estimate local signal in- formations (amplitude, phase and orientation) is based on the analytic representation of this signal. Recently, Felsberg and Sommer [16, 17], proposed a novel n-dimensional generaliza- tion of the analytic signal. In particular, they proposed a 2D isotropic analytic signal, called monogenic signal.

For a given 2D signalf(x), the monogenic signal can be represented by a scalar valued even and vector valued odd filtered responses, with the following simple tick:

even=c∗f ,

odd= (c∗h1∗f, c∗h2∗f) ,

wherec is the spatial domain representation of an isotropic bandpass filter, andh = (h1, h2)is the generalized Hilbert transform kernel,

h(x) = (h1, h2) = 1 2π

x

||x||3 .

Boukerroui et al. in [18, 19], showed that Cauchy family has better properties. In the frequency domain, a 2D isotropic Cauchy kernel is defined by:

C(u) =nc|u|aexp(−s|u|) , a≥1 ,

whereu= (u1, u2),sis a scaling parameter anda/sis the peak tuning frequency of the filter.ncis a normalization con- stant, see [18, 19] for more details.

2.2. Monogenic Feature Asymmetry

Step edge detection is performed using the feature asym- metry measure (F A) of Kovesi [20] defined, in this paper, us- ing the previously presented monogenic signal. The identifi- cation of step edges essentially involves finding points where the absolute value of the local phase is0at a positive edge and180 at a negative edge. In other words, the difference between the odd and the even filter responses is large. Kovesi suggested to useF Aover a number of scales to detect step edge features. We define the multiple scales monogenic fea- ture asymmetry:

F AM S = 1 N

X

s

b|odds| − |evens| −Tsc q

even2s+odd2s

, (1)

whereN is the total number of scales,b·c denotes zeroing of negative values andTsis the scale specific noise threshold

[20]. For a given scale, theF Atakes values in[0,1], close to zero in smooth regions and close to one near boundaries.

The application of Kovesi’sF Ain [21, 22] on ultrasound images has yielded good results. The authors used steerable filters for the 2D extension. To avoid using steerable filters, the authors in [15] used the monogenic signal, as it is the nat- ural extension of the 1D analytical signal. The monogenic feature asymmetry applied on ultrasound images yielded bet- ter results.

3. SEGMENTATION MODEL

LetIdenote a given image defined on the domainΩ, and letCbe a closed contour represented as the zero level set of a signed distance functionφ, i.e.,C ={x|φ(x) = 0,x ∈Ω}.

We specify the interior ofC by a smooth approximation of the Heaviside functionH(φ). Similarly, the exterior ofC is defined as(1−H(φ)).

We introduce the following classical energy functional to be minimized [23, 5]:

EG(φ) =LG(φ) +RG(φ) (2)

=λ Z

gδ(φ)|∇φ|dx

− Z

H(φ) logp(I)dx− Z

(1−H(φ)) logp(I)dx . This energy model is composed of two terms: a gradi- ent edge based termLG(φ)and a global region based term RG(φ). The first term is the Geodesic Active Contour term (GAC) [24], wereλis a positive fixed parameter andgis an inverse edge indicator function, generally taken asg(x, y) = 1/(1+|∇Gσ∗I|). Here,Gσis the Gaussian kernel with stan- dard deviationσ. The second term is a global region based term. Specifically, it is the log likelihood function to maxi- mize, given by the product of the inner and the outer proba- bilities [25, 23]. Here,p(I)represents the probability density function characterizing the observed gray level of imageI.

In the following, we define an alternative energy func- tion, similar to the form of (2), but using local image prop- erties. We use a local phase based edge indicator function g= 1/(1 +γF AM S)instead of the classical inverse gradient based one. Here,γis a scale parameter andF AM S ∈ [0,1]

represents the monogenic feature asymmetry measure defined by (1). This allows us to define the local phase based GAC term notedLP(φ). As it was mentioned in the introduction, recent works showed that ultrasound images respond well to phase based edge detection. Moreover, a multi-scales ap- proach offers a better control on the edge detection quality.

Now, we focus on our new local region term. Classical region based methods, like the ML model, often make strong assumptions on the intensity distributions of the searched ob- ject and background. In order to be less restrictive, the local energy achieves a trade off between local features and global

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region. Furthermore, the localization seems to be a good al- ternative to avoid the attenuation artifact, which is one of the main characteristics of ultrasound images. We aim in the re- mainder of this section to change this termRGto a new local region based termRL[26, 7, 8]. This term is a local version of the one presented by Sarti and al. in [5]. Thus, we use the Rayleigh probability distributionp(I) =I/σ2exp(−I2/2σ2), to model the behavior of the observed gray levels.

To achieve this, we introduce the following characteristic functionBused to define a local region in terms of a radius parameterr[7],

B(y;x) =

(1, ||x−y||< r 0, otherwise .

Thus, the local region version around a given pointx, of the global region termRGin (2), is given by

F(φ;x) =− Z

B(y;x)H(φ) logp(I)dy (3)

− Z

B(y;x)(1−H(φ)) logp(I)dy , this formulation allow as to estimate the pdf parameter σ2 locally, inside and outside the curve. The local ML estimates are given by:

i2(x) = 1 2Mi(x)

Z

B(y;x)H(φ)I2dy ,

o2(x) = 1 2Mo(x)

Z

B(y;x)(1−H(φ))I2dy , wereM iandModenote respectively the local area inside and outsideΩand are given as:

Mi(x) = Z

B(y;x)H(φ)dy , Me(x) =

Z

B(y;x)(1−H(φ))dy .

By introducing these estimates back in the local log- likelihood (3), we obtain the new formulation:

F(φ;x) =

−Mi(x) log 1 Mi(x)

Z

B(y;x)H(φ)I2dy

−Mo(x) log 1 Mo(x)

Z

B(y;x)(1−H(φ))I2dy , By bringing the local phase and local region terms, we now define our new energy built from (2) as follow:

EL(φ) =LP(φ) +RL(φ) (4)

=λ Z

gδ(φ)|∇φ|dy+ Z

δ(φ(x))F(φ;x)dx ,

F(.;x) represents a local image contribution used at each point along the contour to evolve this contour.

This formulation is under the assumption that the local behavior of an ultrasound image follows the Rayleigh distri- bution, and assuming that the size of this local region is suf- ficient for a maximum likelihood estimation of the parameter σ2.

It is straightforward to see that the maskB(y;x)is inde- pendent ofφ. Thus, the associated flow equation ofF(φ;x) is given by:

FLM L(φ;z;x) = log 1 Mi(x)

Z

B(y;x)H(φ(y))I(y)2dy (5) +I(z)2Mi(x) +R

B(y;x)H(φ(x))I(y)2dy R

B(y;x)H(φ(x))I(y)2dy

−log 1 Me(x)

Z

B(y;x)(1−H(φ(y)))I(x)2dy +I(z)2Me(x) +R

B(y;x)(1−H(φ(y)))I(y)2dy R

B(y;x)(1−H(φ(y)))I(y)2dy , in agreement with [5].

Finally, the gradient descent flow minimizing (4), in the level set formulation, is given by (see Appendix):

∂φ

∂τ(x) =δ(φ(x))

"

λdiv

g(x) ∇φ(x)

|∇φ(x)|

+ Z

δ(φ(y))B(y;x)FLM L(φ;y;x)dy

# .

4. RESULTS

As a preliminary validation, we have compared the semi- automatic algorithm results to manual segmentations. We have collected a set of 10 bidimensional cardiac ultrasound images for different patients, obtained from a Philips IE33 echocardiographic imaging system. The data set was seg- mented by two specialists in an independent way, i.e. in dif- ferent days, at the Pediatric Echocardiographic Center, CHU Amiens. Each specialist segments each image 5 times, so that 10 manual segmentations are available for each image. Thus, in all, we have 100 manual segmentations.

Matlab 7.6 (R2008a) was used for the implementation of the proposed method. In all of the experimental results, the following parameters were fixed as such : bandwidth 2.5 oc- taves as suggested in [18], wavelength =[20,22,24,26]pix- els. The radius of the localizing ballrwas fixed to 11 pixels.

Unless otherwise stated,λwas set to 1.

The experiment in Fig.1 shows the performance of the monogenic feature asymmetry to detect step edge boundaries in very noisy and low contrast data. The adverse effect of FA measure is the delocalization, by moving closer to finer

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Fig. 1. Example of monogenic feature asymmetry at a given scales >0. Top: original images, bottom: edge detections.

Fig. 2. Example of the proposed model segmentation results of the left ventricle. The inner dashed contours are the respec- tive initializations. In this experiments,λ= 0.7.

Table 1. Performance indices measures DSC and MAD ver- sus Interobserver, Intraobserver and computer-observer dis- tances. The mean, median and standard deviation for DSC and MAD are shown.

Measures DSC (%) MAD (pixels)

Indexes Mean Median SD Mean Median SD

GAC 87.30 88.65 3.13 5.25 4.96 1.57

GAC+GML 89.33 89.58 3.31 4.43 4.17 1.66 LP+LML 91.90 92.70 2.53 3.53 3.17 1.48 Interobserver 94.82 95.51 2.75 2.42 2.65 0.94 Intraobserver 96.10 96.54 0.83 1.93 1.84 0.27

scales, the FA measure recovers details and discontinuities, but looses regularity and continuity of the boundaries. This drawback can be reduced by using a multiscale detection, see equation (1).

Fig. 2 shows illustrative results of our method on two typi- cal ultrasound images (left ventricle). Fig. 3 shows illustrative comparison results of the proposed segmentation algorithm and the results of the global ML algorithm [5] with manual delineation. These results give the reader some insight re-

Fig. 3. Comparison of the proposed method (left) and the global ML model (right) with a manual delineation. Blue line:

manual delineation, white line: semi automatic segmentation.

Parameterλ= 0.7.

Fig. 4. Comparison of the local and global ML model. Left to right: Initial contour and original synthetic image, segmenta- tion using respectively local and global ML region term only.

garding the robustness to speckle noise and to attenuation.

The last example, Fig.4 demonstrates the effect of a non- uniform illumination with Speckle noise. The edge based term is turned off, wile the region term play the leading role.

In this case, the local region based term gives a successful result while the global region based segmentation algorithm fails.

Table 1 shows a quantitative comparison between our approach -noted LP+LML for local phase with a local ML model- and two semi-automatic segmentation methods : clas- sical GAC and GAC with a global ML model (GAC+GML).

Inter and Intra-observer values are also shown in this table.

The mean, median and standard deviation of all the echocar- diographic images segmentations are shown for both mea- sures: Dice similarity coefficient (DSC) and mean absolute distance (MAD) (See, for example, [27, 6, 15]).

5. DISCUSSION AND CONCLUSION

We have presented a new approach of ultrasound images segmentation. We use known techniques: geodesic active contours and Maximum Likelihood approach. The combina- tion takes advantage of the benefits of both techniques.

Ultrasound images characteristics, such as attenuation and low contrast, suggest the use of local image properties in or- der to improve robustness and accuracy. In our approach, the local phase based GAC term was reinforced by a local re- gion based term in order to improve the capture range and the

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sensitivity of the algorithm to local minima, see Fig.3. Lo- cal model parameter estimation is necessary to preserve the robustness of the algorithm to attenuation.

The radius parameterris very important for the segmen- tation process. It can be adjusted according to the image in- tensity inhomogeneities. It is advisable not to use a very small value ofrto ovoid a high variance in parameter estimation, nor a very large value to avoid a high bias. This parameter must be relatively small and sufficiently large. We also note that the localization adverse effect of FA discussed in the pre- vious section can be corrected by the local region term.

The qualitative evaluation on the natural and synthetic data shows, as expected, that the use of phase based edge detection with an additional local region term provides a sig- nificant improvement with respect to the classical GAC and GAC+GML, see Table 1. A key advantage of this approach is that it is more robust to intensity inhomogeneities, as it is demonstrated in Fig.4. Although only preliminary results are shown, our experiments suggest that the proposed terms can favorably outperform classical ones of the same nature.

Acknowledgment

The authors thank the Regional Council of Picardie and European Union / FEDER for their financial support, and Dr.

Mathiron and Dr. Levy for their help in the clinical evaluation of the data.

A. FUNCTIONAL MINIMIZATION

To compute the first variation of equation (3), we express F(φ;x)asF(φ+τ ψ;x)and take the partial derivative with respect toτ evaluated atτ = 0. This allows us to represent a tiny differential of movement. Here,ψ represents a small perturbation along the normal direction ofφweighted by a scalarτ. In agreement to [5], we obtain

∂τF(φ+τ ψ;x) τ=0

= Z

δ(φ(y))B(y;x) (6)

×FLM L(φ;y;x)ψ(y)dy , wereFLM L(.)is the associated flow equation ofF(.)as ex- pressed in (5).

Moreover, starting from the local energy term RL(φ) given in (4),

RL(φ) = Z

δ(φ(x))F(φ;x)dx , the tiny differential of movement is given by

∂τRL(φ+τ ψ) τ=0

= ∂

∂τ Z

δ(φ(x) +τ ψ(x))

×F(φ+τ ψ;x)dx

τ=0

,

by the product rule, we obtain the following:

dRL(φ, ψ) = Z

δ0(φ(x))ψ(x)F(φ;x)dx +

Z

δ(φ(x))dF(φ, ψ;x)dx , weredF(φ, ψ;x)denotes the directional derivative ofF(φ;x) as presented in the equation (6). δ0(φ)denotes the derivative of δ(φ). This term is ignored, because it does not affect the movement of the curve [7]. The equation ofdRL(φ, ψ) becomes:

dRL(φ, ψ) = Z

δ(φ(x))

× (Z

δ(φ(y))B(y;x)FLM L(φ;y;x)ψ(y)dy )

dx . By moving the integral overyoutside the integral overx we obtain:

dRL(φ, ψ) = Z

Z

δ(φ(x))δ(φ(y))

× B(y;x)FLM L(φ;y;x)ψ(y)dxdy . From this equation it is easy to determine the associated flow:

∂φ

∂τ(x) =δ(φ(x)) Z

δ(φ(y))B(y;x)FLM L(φ;y;x)dy .

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