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OPTICAL METHODS FOR IN SITU BIOFILM DETECTION

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OPTICAL METHODS FOR IN SITU BIOFILM DETECTION

Introduction:

One of the main problems in the food industry in reference to food safety and consequent disease transmission is represented by the survival of pathogenic or altering microorganisms that form biofilms. For this reason, it is very important to detect these structures, in order to subsequently prevent their formation or in order to be able to make decisions quickly and reliably, regarding the cleaning and disinfection procedures used.

Aim:

To find analytical methods capable of detecting the presence of biofilms on surfaces in the food industry at real time (in situ).

Table 1. Classification of potentially applicable methods for detection of biofilms in the food industry:

In-line Electromagnetic waves

Real time

(in situ) Lab-on-a- chip[1]

Light absorbance variations

UV-LED

sensor[2] Fluorescence ETT-sensor[3] Transmission

spectrum measures Acoustic waves Real time

(in situ) SAW sensor[4] Resonant frequency shift

At-line Electromagnetic waves

Real time

(in situ) BactiscanTM[5] Fluorescence Off-line Electromagnetic

waves

Not real

time FISH* Fluorescence

CLSM* Fluorescence

Conclusions :

For the resolution of the problem of contamination by biofilms in the food industry, two trends have been highlighted:

1) Based on optical fiber sensors that allow automated control and continuous measurement. Used on surfaces, equipment and areas with difficult access.

2) Based on the use of portable and easy-to-use devices that allow large areas to be visualized by fluorescence.

All these methods allow us to verify that the cleaning and disinfection protocols have been effective against the elimination of biofilms and otherwise allow quick decision-making.

The best option to keep the problem of biofilms under control in a company would be to combine the use of at least two methods.

Food Science and Technology

Núria De Francisco Camprubí June 2021

Final degree project

*Fluorescence in situ hybridization (FISH); Confocal laser scanning (CLSM)

[1] Antúnez, B. (2015). Early detection of biofilms using low-cost polymeric optical Lab-on-a-chip [tfm]. Barcelona: Escola Tècnica Superior d’Enginyeria de Telecomunicació de Barcelona. https://upcommons.upc.edu/handle/2117/78457

[2] Fischer, M., Wahl, M., & Friedrichs, G. (2012). Design and field application of a UV-LED based optical fiber biofilm sensor. Biosensors and Bioelectronics. 33(1), 172–178. https://doi.org/10.1016/j.bios.2011.12.048

[3] Kurmoo, Y., Hook, A. L., Harvey, D., Dubern, J.-F., Williams, P., Morgan, S. P., Alexander, M. R. (2020). Real time monitoring of biofilm formation on coated medical devices for the reduction and interception of bacterial infections. Cite This: Biomater. Sci. 8, 1464. https://doi.org/10.1039/c9bm00875f

[4] Kim, Y. W., Sardari, S. E., Meyer, M. T., Iliadis, A. A., Wu, H. C., Bentley, W. E., & Ghodssi, R. (2012). An ALD aluminum oxide passivated Surface Acoustic Wave sensor for early biofilm detection. Sensors and Actuators B. 163, 136–145. : https://doi.org/10.1016/j.snb.2012.01.021

[5] EIT International. (2020). How does the Bactiscan help elimate risk exposure caused by bacteria contaminants?. Winchister. https://www.eit- international.com/bactiscan/

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