The NCBO Annotator: Ontology-Based Annotation as a Web Service

(1)

!"#$%&%"'()'*+,#-,./'0.,1,2#'34256,#/'0+,$%,'7462/' 8%&+",.'94$:/';"<'=,$>,$?42/'8"$@'86?,2/'A%>"1'B+"+'

B#"2:4$C'0,2#,$':4$'D%41,C%&".'E2:4$1"#%&?';,?,"$&+/'B#"2:4$C'F2%G,$?%#</'0H/'FBH'

I+,' A0DJ' H224#"#4$' *,K' B,$G%&,'

L+##MNOOPPP)K%442#4.4><)4$>OP%@%O%2C,Q)M+MOH2 24#"#4$R*,KR?,$G%&,S'M$4G%C,?'"'1,&+"2%?1'#4'

>,2,$"#,'42#4.4><TK"?,C'"224#"#%42?'K<'#">>%2>'

#,Q#6".'1,#"C"#"'?6K1%##,C'#4'#+,'*,K'?,$G%&,' L,)>)'#,Q#'4:'%2#,$,?#'#4'#+,'6?,$S'P%#+'42#4.4><'

#,$1?' :$41' D%4!4$#".' L+##MNOOK%4M4$#".)K%4' 42#4.4><)4$>OS)' I+,' *,K' ?,$G%&,' &"2' K,'

&6?#41%-,C' :4$' G"$%46?' 6?,' &"?,?' #+$46>+'

?,.,&#%42' 4:' M"$"1,#,$?' ?6&+' "?' #+,' &+4%&,' 4:' 42#4.4>%,?/' ?#4M' P4$C?/' "2C' F8(B' B,1"2#%&' I<M,?' L=%>6$,' US)' I+,' "224#"#%42' M$4&,??'

>,2,$"#,?' C%$,&#' "224#"#%42?' "2C' &"2' ".?4'

>,2,$"#,',QM"2C,C'"224#"#%42?'K"?,C'42'#+,'!"#

$' +%,$"$&+<' 4:' #+,' 42#4.4><' "2CO4$' 1"MM%2>?'

K,#P,,2' 42#4.4>%,?' L=%>6$,?' V/' WS)' I+,' H224#"#4$'*,K'?,$G%&,'%?'"';XBI:6.'*,K'?,$G%&,'

"2C' "' 261K,$' 4:' ?"1M.,' &.%,2#?' +"G,' K,,2' C,G,.4M,C' L+##MNOOPPP)K%442#4.4><)4$>OP%@%O%2' C,Q)M+MOH224#"#4$R0.%,2#RXQ"1M.,?S/' %2&.6C%2>'

"2' XQ&,.' HCC%2)' I+,' ,"?,' 4:' "&&,??' #4' #+%?'

"224#"#%42' :62&#%42".%#<' 1"@,?' #+,' #"?@' 4:'

&$,"#%2>' 42#4.4><TK"?,C' "224#"#%42?' "&&,??%K.,' :4$'"2<'K%41,C%&".'$,?,"$&+,$)''F?,'&"?,?'4:'#+,' A0DJ' H224#"#4$' %2&.6C,' #$%">%2>' .%#,$"#6$,'

#4' M$%4$%#%-,' &6$"#%42' 4:' M6K.%&"#%42?' "2C'

"224#"#%2>':$,,'#,Q#'C"#"'C,?&$%M#%42?':$41'.%:,'

?&%,2&,' C"#"K"?,?' "2C' &.%2%&".' $,&4$C?' #4' ,2+"2&,'%2:4$1"#%42'$,#$%,G".)'

'''

!"#$%&'()!"#$!%&'(!)**+,-,+.!/$0!1*,$.2-3$!+*!'1+4+.,-56!!

78$.8!3-*!8$5$3,!9#13#!+*,+5+:1$8!,+!;8$!2+.!-**+,-,1+*!<-=!-*>!.$8;5,8!3-*!0$!215,$.$>!,+!,$.?8!91,#1*!7@AB!B$?-*,13!"CD$8!<0=6!

'

!"#$%&'*)!E$8;5,8!2.+?!,#$!%&'(!)**+,-,+.!1*35;>1*:!$FD-*>$>!-**+,-,1+*8!0-8$>!+*!,#$!"#$%!#1$.-.3#C!+2!,#$!+*,+5+:C6!

"#$!>1.$3,!-**+,-,1+*8!-.$!#1:#51:#,$>!1*!05;$!-*>!,#$!$FD-*>$>!-**+,-,1+*8!-.$!#1:#51:#,$>!1*!:.$$*6!

,&%2,QWHUQDWLRQDO&RQIHUHQFHRQ%LRPHGLFDO2QWRORJ\

-XO\ā%XIIDOR1<86$

(2)

!"#$%&'()!"#$%&'$!()*+!',#!-./0!122*'3'*)!425&%6427!#89326#6!322*'3'4*2$!:3$#6!*2!+399427$!:#';##2!*2'*&*74#$<!

dŚĞƚĞƌŵ͞ƐŬŝŶŵĞůĂŶŽŵĂ͟ĨƌŽŵK^dZdŝƐƌĞƚƵƌŶĞĚĂƐĂƌĞƐƵůƚŽĨƚŚĞŵĂƉƉŝŶŐĞǆƉĂŶƐŝŽŶ͘!

!