non coding
Non-coding RNAs control of phytobeneficial genes expression by pseudomonas brassicacearum
... switching in vitro as well as in the rhizosphere. This switch is caused by spontaneous mutations that occur at high frequency into gacS/gacA system. This system activates the transcription of several genes engaged in ...
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The Non-Coding RNA Journal Club: Highlights on Recent Papers—2
... Non-Coding RNA 2015, 1 168 ...the coding capacity, the longest mRNA isoform (FL-Irs-1) functions as an inhibitor of Rb mRNA expression through a complementary sequence element present in the 5′-UTR, ...
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XACT, a long non-coding transcript coating the active X chromosome in human pluripotent cells
... long non-coding transcript coating the active X chromosome in human pluripotent cells Céline Vallot 1,2 , Christophe Huret 2 , Yann Lesecque 3 , Alissa Resch 4 , Nouf ϊssa Oudrhiri 5 , Annelise Bennaceur 5 ...
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Identification of candidate long non-coding RNAs in response to myocardial infarction Identification of candidate long non-coding RNAs in response to myocardial infarction
... into non- protein coding RNAs [5-7]. Non-coding RNAs have been arbitrarily dichotomized as short non-coding RNAs (20–22 nucleotides-long, called microRNAs, miRNAs) and long ...
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An overview of long non-coding RNAs in ovarian cancers
... that at least 75% of the genome is transcribed into non- coding RNAs [6]. Although the functional significance of this entire pool of transcripts is still under debate [7], a vast repertoire of long ...
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The Non-Coding RNA Journal Club: Highlights on Recent Papers—3
... 1. Introduction We are glad to share with you our third Journal Club and to highlight some of the most interesting papers published recently. We hope to help you keep aware of non-coding RNA research ...
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Genomic Instability Signature of Palindromic Non-Coding Somatic Mutations in Bladder Cancer
... RT-PCR. Non-coding somatic mutations were observed for at least one TGAACA core motif locus in ...These non-coding mutations co-occurred in the bladder tumors but were absent in prostate ...
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The Non-Coding RNA Journal Club: Highlights on Recent Papers—6
... 7. Long Non-Coding RNA “Entrap” Tumor Suppressor microRNAs to Promote Cancer Growth and Migration Highlight by Luo Song, George A. Calin and Shuxing Zhang We have a deep interest in modeling RNA–protein [ 7 ...
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The Non-Coding RNA Journal Club: Highlights on Recent Papers—5
... Recently, a novel class of regulatory non-coding RNAs (ncRNAs), independent of Drosha and Dicer cleavage, has been described by Hansen et al [ 1 ]. These ncRNAs are named agotrons. Agotrons are processed ...
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TAGOOS: genome-wide supervised learning of non-coding loci associated to complex phenotypes
... functional non-coding associated loci, the sim- plest option is to annotate the loci with key regulatory fea- tures such as H3K27ac or ChromHMM chromatin states ( 11 ...
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Single molecule characterization of the roles of long non-coding RNAs in eukaryotic transcription regulation
... of non-coding transcripts in ...protein coding genes, and accumulate in strains depleted of the nuclear exosome component ...protein coding genes, mechanisms have evolved which prevent ...
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Degradation of Non-coding RNAs Promotes Recycling of Termination Factors at Sites of Transcription
... the non-coding transcriptome in yeast is controlled by the Nrd1-Nab3-Sen1 (NNS) complex, which promotes transcription termination of non-coding RNA (ncRNA) genes, and by the nuclear exosome, ...
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Expression of long non-coding RNA ANRIL predicts a poor prognosis in intrahepatic cholangiocarcinoma
... antisense non-coding RNA in the INK4 locus (ANRIL), was identified as a prognostic biomarker, not only in iCCA, but also in hepatocellular, kidney and uterine corpus ...
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Chromatin Signature Reveals over a Thousand Highly Conserved Large Non-Coding Rnas in Mammals
... reference name for each lincRNA is shown on the left, the predicted sizes are indicated on the right. For each tissue, GAPDH was hybridized as a control. Figure 2: Transcribed Segments in intergenic K4/K36 domains do not ...
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Genome-Wide Analysis of Long Non-Coding RNA Profiles in Canine Oral Melanomas
... 2.7 × 10 −8 ). Interestingly, this lncRNA has been shown to be involved in the regulation of ZEB2 mRNA during the epithelial–mesenchymal transition (EMT) in human cell lines [ 29 ]. 3.3. Comparative Genomics of Canine ...
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Differential long non-coding RNA expression profiles in human oocytes and cumulus cells
... Commes 1 , Jean-Marc Lemaître 1,4 , John De Vos 1,4,5 & Said Assou 1 Progress in assisted reproductive technologies strongly relies on understanding the regulation of the dialogue between oocyte and cumulus cells ...
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Ablation of non-coding RNAs affects bovine leukemia virus B lymphocyte proliferation and abrogates oncogenesis
... Strength of the reverse genetics approach is that the role of genetic determinants can be investigated in relevant conditions in vivo (i.e. in the context of a provirus expressed at physio- logical levels in the correct ...
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Long non-coding RNAs as molecular signatures for canine B-Cell lymphoma characterization
... with non-DLBCL1 (see Figure 5), and this was also confirmed by GSEA analysis (Supplementary material S2) comparing DLBCL1 in EHA1 versus DLBCL1 in EHA2, DLBCL1 in EHA1 versus DLBCL2, and DLBCL3 versus DLBCL1 in ...
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Long non-coding RNA exploration for mesenchymal stem cell characterisation
... of non cancerous cell types were used for novel lncRNAs detection and tissue expression ...intergenic non-coding RNAs” named “Mlinc”, and to “MSC-related long overlapping antisense RNAs” called ...
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Identification of a dinucleotide signature that discriminates coding from non-coding long RNAs
... discriminates non-protein-coding gene loci from infrastructural RNA genes, pseudogenes or antisense sequences of coding genes, is contaminated by genes hosting snoRNA or clus- ters of ...of ...
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