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Using ecological models to assess ecosystem status in support of the European Marine Strategy Framework
Directive
Chiara Piroddi, Heliana Teixeira, Christopher Lynam, Chris Smith, María Alvarez, Krysia Mazik, Eider Andonegi, Tanya Churilova, Letizia Tedesco,
Marina Chifflet, et al.
To cite this version:
Chiara Piroddi, Heliana Teixeira, Christopher Lynam, Chris Smith, María Alvarez, et al.. Using
ecological models to assess ecosystem status in support of the European Marine Strategy Framework
Directive. Ecological Indicators, Elsevier, 2015, 58, pp.175-191. �10.1016/j.ecolind.2015.05.037�. �hal-
02154205�
EcologicalIndicators58(2015)175–191
ContentslistsavailableatScienceDirect
Ecological Indicators
jou rn al h om ep a g e :w w w . e l s e v i e r . c o m / l o c a t e / e c o l i n d
Review
Using ecological models to assess ecosystem status in support of the European Marine Strategy Framework Directive
Chiara Piroddi
a,∗, Heliana Teixeira
a, Christopher P. Lynam
b, Chris Smith
c,
Maria C. Alvarez
d,l, Krysia Mazik
d, Eider Andonegi
e, Tanya Churilova
f,k, Letizia Tedesco
g, Marina Chifflet
e, Guillem Chust
e, Ibon Galparsoro
e, Ana Carla Garcia
h, Maria Kämäri
g, Olga Kryvenko
f,k, Geraldine Lassalle
i,j, Suzanna Neville
b, Nathalie Niquil
j,
Nadia Papadopoulou
c, Axel G. Rossberg
b, Vjacheslav Suslin
k, Maria C. Uyarra
eaEuropeanCommission,JointResearchCentre(JRC),InstituteforEnvironmentandSustainability(IES),WaterResourcesUnit,21027Ispra(VA),Italy
bCentreforEnvironment,Fisheries&AquacultureScience(Cefas),PakefieldRoad,LowestoftNR330HT,UK
cHellenicCentreforMarineResearch,P.O.Box214,71003Heraklion,Crete,Greece
dInstituteofEstuarine&CoastalStudies,UniversityofHull,CottinghamRoad,HullHU67RX,UK
eAZTI,MarineResearchDivision,Herrerakaiaportualdeaz/g,20110Pasaia,Spain
fInstituteofBiologyoftheSouthernSeas,2NakhimovAve,299011Sevastopol,RussianFederation
gFinnishEnvironmentInstitute,MarineResearchCentre,Helsinki,Finland
hIMAR,InstitutodoMar,LargoMarquesdePombal,3004-517Coimbra,Portugal
iIRSTEA,UREABX,AquaticEcosystemsandGlobalChanges,50avenuedeVerdun,33612Cestascedex,France
jCNRS,UMR7208BOREA,NormandieUniversité,UniversitédeCaenBasse-Normandie,14032Caencedex5,France
kMarineHydrophysicalInstitute,2KapitanskayaStr.,299011Sevastopol,RussianFederation
lNaturalEngland,SustainableDevelopment,TempleQuayHouse,BristolBS16DG,UK
a r t i c l e i n f o
Articlehistory:
Received9July2014
Receivedinrevisedform14April2015 Accepted19May2015
Keywords:
MSFD
Marineecosystems Ecologicalmodels Model-derivedindicators Pressures
Habitats
Biodiversitydescriptors
a b s t r a c t
TheEuropeanUnion’sMarineStrategyFrameworkDirective(MSFD)seekstoachieve,forallEuropean seas,“GoodEnvironmentalStatus”(GEnS),by2020.Ecologicalmodelsarecurrentlyoneofthestrongest approachesusedtopredictingandunderstandingtheconsequencesofanthropogenicandclimate-driven changesinthenaturalenvironment.Weassessthemostcommonlyusedcapabilitiesofthemodelling communitytoprovideinformationaboutindicatorsoutlinedintheMSFD,particularlyonbiodiversity, foodwebs,non-indigenousspeciesandseafloorintegritydescriptors.Webuiltacatalogueofmodelsand theirderivedindicatorstoassesswhichmodelswereabletodemonstrate:(1)thelinkagesbetweenindi- catorsandecosystemstructureandfunctionand(2)theimpactofpressuresonecosystemstatethrough indicators.Oursurveyidentified44ecologicalmodelsbeingimplementedinEurope,withahighpreva- lenceofthosethatfocusonlinksbetweenhydrodynamicsandbiogeochemistry,followedbyend-to-end, speciesdistribution/habitatsuitability,bio-optical(remotesensing)andmultispeciesmodels.Approx- imately200indicatorscouldbederivedfromthesemodels,themajorityofwhichwerebiomassand physical/hydrological/chemicalindicators.Biodiversityandfoodwebsdescriptors,with∼49%and∼43%
respectively,werebetteraddressedinthereviewedmodellingapproachesthanthenon-indigenous species(0.3%)andseafloorintegrity(∼8%)descriptors.Outof12criteriaand21MSFDindicatorsrele- vanttotheabovementioneddescriptors,currentlyonlythreeindicatorswerenotaddressedbythe44 modelsreviewed.Modellingapproachesshowedalsothepotentialtoinformonthecomplex,integra- tiveecosystemdimensionswhileaddressingecosystemfundamentalproperties,suchasinteractions betweenstructuralcomponentsandecosystemsservicesprovided,despitethefactthattheyarenotpart oftheMSFDindicatorsset.Thecataloguingofmodelsandtheirderivedindicatorspresentedinthisstudy, aimathelpingtheplanningandintegrationofpoliciesliketheMSFDwhichrequiretheassessmentof allEuropeanSeasinrelationtotheirecosystemstatusandpressuresassociatedandtheestablishment ofenvironmentaltargets(throughtheuseofindicators)toachieveGEnSby2020.
©2015TheAuthors.PublishedbyElsevierLtd.ThisisanopenaccessarticleundertheCCBYlicense (http://creativecommons.org/licenses/by/4.0/).
∗Correspondingauthorat:InstituteofMarineScience,SpanishResearchCouncil,Barcelona,Spain.
E-mailaddress:cpiroddi@hotmail.com(C.Piroddi).
http://dx.doi.org/10.1016/j.ecolind.2015.05.037
1470-160X/©2015TheAuthors.PublishedbyElsevierLtd.ThisisanopenaccessarticleundertheCCBYlicense(http://creativecommons.org/licenses/by/4.0/).
176 C.Piroddietal./EcologicalIndicators58(2015)175–191 Contents
1. Introduction...176
2. Cataloguestructure...176
3. Modelcharacteristics...177
3.1. Biogeochemicalmodels...177
3.2. Multispeciesmodels...177
3.3. SpeciesDistributionModels(SDM)/HabitatSuitabilityModels(HSM)...177
3.4. Meta-communitymodels...177
3.5. Bio-opticalmodels...180
3.6. Hydrodynamic–biogeochemicalModels...180
3.7. End-to-endmodels...180
4. Modelpotentialtoaddressdescriptorsandindicatorsforbiologicaldescriptors...180
4.1. Biodiversitycomponentsandhabitats...183
5. Modelsgeographicalcoverage...185
6. Addressingpressureswithmodels...185
7. Gapsanddevelopmentneeds...188
Acknowledgements...190
AppendixA. Supplementarydata...190
References...190
1. Introduction
Theuseof robustandappropriate indicatorsthat canassess whetheranecosystemanditsservicesarewellmaintainedandsus- tainablyused(Layke,2009;Walpoleetal.,2009;TEEB,2010)has beenrecognisedasanessentialstepforthepracticalimplemen- tationofconservationandmanagementpolicies(Romboutsetal., 2013).SeveraleffortshavebeenundertakenataEuropeanscaleto evaluatemarineecosystemstructureandtheirresponsetohuman activities,usingkeyindicatorstoassessandsustain“GoodEnvi- ronmentalStatus”(GEnS;Borjaetal.,2011).Theseinitiativeshave beencarriedouttoassisttheMarineStrategyFrameworkDirective (MSFD,2008/56/EC;EuropeanCommission,2008),themainEuro- peanDirectivethatfocusesonmarinewatersandaimsatassessing thestatusofanecosystemunderanthropogenicpressuresandthe requiredinterventionstobringthesystembacktoitsdesiredgood status,makinghumanactivitiessustainable,sincethisisoneofthe objectivesoftheMSFD.ToachieveGEnS,11descriptors,29associ- atedcriteriaand56indicators(frombiological,physico-chemical indicatorsaswellaspressureindicators—includinghazardoussub- stances,hydrological alterations,litter andnoise, and biological disturbancesuchasintroductionofnon-indigenousspecies)have beenidentified(Cardosoetal.,2010;EuropeanCommission,2010) (Tables2and4).
Despitethefactthatseveralattemptshavebeenmadetoassess theenvironmentalstatusofmarinewatersinanintegrativemanner (Borjaetal.,2011;Halpernetal.,2012;Tettetal.,2013),signifi- cantgapsstillexistonunderstandingmarineecosystemstructures andfunctionsandtheirresponsetohumanpressures(Katsanevakis etal.,2014;Borjaetal.,2013).Currently,ecologicalmodelshave beenrecognisedaspowerfultoolstoevaluateecosystemstructure andfunctionandpredicttheimpactsofhumanactivities(Fulton andSmith,2004;Shinetal.,2004;ChristensenandWalters,2005;
Plagányi,2007;Fulton,2010)andclimatechange(Tomczaketal., 2013;Chustetal.,2014)onmarinesystems.
Thus,thisstudyaimstoassessthemostcommonlyusedcapa- bilityofthemodellingcommunitytoinformonindicatorsoutlined intheEUMSFD(2008/56/EC),focusingparticularlyonbiodiver- sityrelateddescriptors:biologicaldiversity(D1),non-indigenous species(D2),foodwebs(D4),andseafloorintegrity(D6).Todate, therehasbeennothoroughevaluationofthecapabilitiesofeco- logicalmodelstoprovideinformationasexplicitlyoutlinedbythe MSFDindicatorstructure,thistaskhasbeenonlypartiallyunder- taken(e.g.,Reiss etal.,2014).Withthis work,weaimtofill in thisknowledge gapbyproviding aninventoryofmodelsin EU regionalseas thatcouldassess MSFDindicatorsassociatedwith
biodiversity, non-indigenous species, food webs and seafloor integrity.Forthisreason,wehavebuiltamodelcatalogueranging from lower to higher trophic levels, including those that suc- cessfullycouplethetwocompartmentsandassociatedecosystem processes.Thisinventory,developedaspartoftheDEVOTESFP7 Project(http://www.devotes-project.eu/),servestohighlightthe vastpotentialofmodel-derivedindicatorsthatcanbeassociated withMSFD descriptorsand aims toprovidea thorough assess- mentoftheirrelevanceanddegreeof“operationality.”Adetailed descriptionofmodelsandassociatedreferencestogetherwiththe fullcatalogueareprovidedassupplementarymaterials(S1andS2).
Yet,we acknowledgethat this study doesnot aimto serve as review of allthe existing modelsavailable in theliterature, butinsteadhighlightaprocessofexploringmodellingpotential tosupport specificEuropean policies.Because of thenature of theseissues,though,similarcasestudiesconductedelsewhereare likely tolead tosimilaroutcomes,conclusions,andrecommen- dations (e.g.,because ofsimilar/same model availability and/or processunderstanding).Thus,thisworkemphasisesseveraltypes ofecologicalmodellingandderivedindicatorsthatexistatEUlevel stressinghowsuchdiversityofmodellingapproachescouldbeuse- fultosupportmanagementpoliciesandthelimitationsthatstill occurtoachievethistask.
Inparticular,thisstudyisdividedintosixsections,comprising (1)cataloguestructure;(2)ageneraloverviewofmodelcharac- teristics;(3)modelpotentialtoaddressMSFDGEnSdescriptors andindicators(includingtheabilitytoaddressbiodiversitycompo- nentsandhabitattypes);(4)geographicalcoverageofmodels;(5) abilitytoaddresspressures;and(6)gapsinmodelstype/modelling capabilityandneedsforfurtherdevelopment.
2. Cataloguestructure
Thecataloguehasbeenbuiltprimarilywithmodels/areastar- geted by the DEVOTES partners (which represent 23 research institutionsfromEUandnonEUcountries),yetwithaneffortto integrateavailablemodels/areasfromotherinventories(e.g.,the MEECEprojecthttp://www.meece.eu/Library.aspx)andscientific literature(seeS1).
The catalogue has been structured with several fields fol- lowing theMSFDCommissionDecision 2010/477/EU(European Commission,2010)andgroupedintosixmaincategories:
i.Model/Indicatorpropertieswiththefollowingsub-categories:
a.MSFDdescriptor/indicator,descriptor/indicatoroutlinedinthe directive
C.Piroddietal./EcologicalIndicators58(2015)175–191 177 b.Modelderivedindicator(MDI),indicatorresultantfrommodel
output
c.MDItypedefinedas1.Static(e.g.,snapshotoftheindicator atapreciseperiodoftime),2.Dynamic(e.g.,indicatorwhich changesintime)or3.Spatialdynamic(e.g.,indicatorwhich changesintimeandspace)
d.MDI statusof developmentdefined as 1. Operational, when theindicatorisdeveloped,testedandvalidated(e.g.,itcould beeitheranindicatorusedbytheMemberStates(MS)for national environmentalmonitoring;or in EU/International Conventions’ monitoring programmes; or validated with observed/surveydataalthoughnotnecessarilyapprovedby anynational/internationallaworconvention);2.Underdevel- opment,anindicatorproposalexists,butnotyetvalidatedin field/realdata(e.g.,indicatornot yetusedfor MSnational environmentalmonitoringorfor EU/InternationalConven- tions’ monitoring programmes; or not yet validated with surveydata);3.Conceptual,anindicatoridea,supportedby theoreticalgrounds,althoughnopracticalmeasure/metricis yetavailable(e.g.,indicatornotyettested)
e. MDI target/reference values and unit defined as thresh- olds/limitsrepresentingboundariesbetweenanacceptable andunacceptablestatus
f.Modelnamereferringtothelabelusedtoidentifyaparticular model
g.Model type referring to model characteristics/properties and/ortothetechniqueusedtoassessspecificecosystems h. Datarequirementsreferringtodataneededtorunacertain
model
i.Confidence/uncertaintyreferring to theability ofmodelsto assessuncertaintyfortheinput/outputdataanditisdefined asthetypeofstatisticalanalysisusedtoevaluateit
j.SourceScientificliteratureandorInstitutionalreportsuppor- tingselectedMDI/modelsentries
ii.Model/MDIinrelationtoMSFDDescriptors:referringtomodels andMDIbroadcapabilitytoaddressthe11descriptorsofthe directive(D1–D11).
iii.Model/MDIcorrespondencewithMSFDBiodiversityIndicators:
referringtomodelsandMDIassessedinrelationtotheircapabil- itytoprovideinformationforthespecificindicatorslistedunder thecriteriaofthefourdescriptors(D1/D2/D4/D6)asofficially outlinedintheEuropeanCommission(2010).
iv.Model/MDI correspondence with biodiversity components referring to which biodiversity components (e.g., microbes, phytoplanktonand fish) theindicatorwasrelated toorwas evaluatedwith.Categoriesadoptedforbiodiversitycomponents followed those of theEuropean Commission(2010) and EU CommissionStaffWorkingPaper(CSWP,2012).
v.Model/MDI coverageofspecific habitattypesandgeograph- ical range/scale referred towhether an MDI was related to certain habitats and geographical areas. Categories adopted forHabitatTypesfollowedthoseoftheEuropeanCommission (2010)andEUCommissionStaffWorkingPapers(CSWP,2011, 2012). Concerning geographical coverage, we have adopted well-establishedinternationalcriteriaforsmallerscalesubdi- visionsorecologicalassessmentareasinordertoincreasethe spatialdetailontheinformationcollected(e.g.,theInternational CouncilfortheExplorationoftheSea(ICES)andGeneralFish- eriesCommissionfortheMediterranean(GFCM)subdivisions;
seemapsunderS1).
vi.Model/MDIrelationtospecificpressures:referringtowhether therewasscientificevidenceofarelationshipbetweenapres- sureandaspecificindicator.Indicatorswererelatedtopressures eitherasresponsive/sensitiveto,oraffectedbyagivenpres- sure(stateindicators,e.g.,mainlythroughchangesintrends) orindicatorswereactuallypressureindicatorsthemselves.The
consideredpressuresfollowthelistofpressuresandimpactsof Annex3oftheMSFD(seeS3).
3. Modelcharacteristics
Themodelcataloguerevealedthatcurrently44 modelshave beenappliedwithoutputsrelevanttoMSFDdescriptors(Table1).
These ecological models being used to describe or understand ecosystemprocessescanbecategorisedunderseventypesofmod- ellingapproachesdescribedbelow:
3.1. Biogeochemicalmodels
Thebulkpropertiesofbiogeochemicalfluxesinmarineecosys- temsarecombinedwithinformationonphysicalforcing,chemical cyclingandecologicalstructuretosimulatetheresponseoflower trophic level groups (phytoplankton and zooplankton) to envi- ronmental conditions, including climate variability and change (Gnanadesikanetal.,2011;JørgensenandFath,2011).Suchmodels typicallyhaveverysimplifiedrepresentationsofbiologicalorga- nisms,andassociatedtrophicstructure(Anderson,2005).
3.2. Multispeciesmodels
Thesemodelsrepresentpopulationsofdynamicallyinteracting speciesorfunctionalgroups.Somemodelsalsoresolvemultiple stagesorsize-classeswithinpopulations(ChristensenandWalters, 2004;Hollowedetal.,2000;ShinandCury,2001).Focusofthese modelsisonunderstandingtheimplicationoftheindirectinterac- tionsinecosystemsthatresultfromthecomplexnetworksofdirect predator–preyinteractions in marinecommunities. The models aimtorepresent,forexample,top-downorbottom-upeffectsalong marinefoodchain rangingfromprimaryproducers(e.g.phyto- plankton)totoppredators(e.g.,marinemammals),ortheroleof indirectcompetitiveinteractionsamongspecies(Fungetal.,2015).
Effectsofexploitationbyfisheriesandenvironmentalchangeare alsofrequentlydescribedbythesemodels.
3.3. SpeciesDistributionModels(SDM)/HabitatSuitability Models(HSM)
SDMcombineobservationsofspeciesoccurrenceorabundance withenvironmentalexplanatoryvariables todevelopecological andevolutionaryunderstandingandtopredictdistributionacross selectedhabitats(Elithand Leathwick,2009;Reissetal.,2014).
HSMrelatefieldobservationstoasetofenvironmentalvariables (e.g., reflecting key factors of theecological niche like climate, topography,geology)toproducespatialpredictionsonthesuit- abilityoflocationsforatargetspecies,communityorbiodiversity (Hirzeletal.,2006).AnewgenerationofSDM/HSM–i.e.dynamic bioclimaticenvelopemodels– nowprovidegreaterlinkstothe mechanisticunderstandingofnicheecology.Suchmodelstypically includeadditionalmodelcomponentsthatdescribephysiological responsesofspeciestotheenvironment,populationdynamicsand dispersal,tofurtherconstrainthedistributionofsuitablehabitat andprovidemorerealisticspeciesdistributionprojections(Cheung etal.,2011).
3.4. Meta-communitymodels
Meta-communityisasetofinteractingcommunitieswhichare linkedbythedispersalofmultiple,potentiallyinteractingspecies.
In this context,meta-community modelsaretheoretical frame- worksdescribingspecificmechanisticprocessesinordertopredict empirical community patterns. They deal mainly with species
178C.Piroddietal./EcologicalIndicators58(2015)175–191
Table1
Summarytableofmodelslibraryshowingmodels’name,acronym,datatype(SP:spatial;DY:dynamic;ST:static),numberofmodelderivedindicatorsanduncertainty(VOD:validatedwithobserveddata;VOD*:someofthe indicatorsstillneedtobevalidatedwithobserveddata;NA:notavailable;STAT:statisticalanalysis;BOOT:bootstrap;PE:pedigree).
# Modelname Modelacronym Typeofthemodel Coupled Datatype Modelderived
indicators
Uncertainty
1 EuropeanRegionalSeasEcosystemModel(ERSEM) ERSEM Biogeochemical No SP-DY 2 VOD
2 BlackSeachlorophyllandcoloureddissolved/detrital matter(Chl&CDM)model
BS-Chl&CDM Bio-opticalmodels(remotesensing) No SP-DY 4 VOD*
3 BlackSeamodelofdownwellingradiance(BS-PARModel) BS-PAR Bio-opticalmodels(remotesensing) No SP-DY 1 VOD
4 BlackSeaParticleSizeDistribution(PSD)model BS-PSD(PSC) Bio-opticalmodels(remotesensing) No SP-DY 3 VOD
5 BlackSeaspectralPrimaryProduction(SPP)model BS–SPP Bio-opticalmodels(remotesensing) No SP-DY 1 VOD*
6 BlackSealInherentOpticalPropertiesmodel(IOPs) BS-IOPs Bio-opticalmodels(remotesensing) No SP-DY 3 VOD
7 NorthSeaOpticalProperties(NSOP) NSOP Bio-opticalmodels(remotesensing) No DY 1 STAT
8 1DGeneralOceanTurbulenceModel(GOTM)and EuropeanRegionalSeasEcosystemModel(ERSEM)and EcopathwithEcosim(EwE)
GOTM-ERSEM-EwE Endtoend Yes DY 6 NA
9 PrincetonOceanModel(POM)andBlackSeaIntegrated ModellingSystem-Ecosystem(BIMS-ECO)andEcopath withEcosim(EwE)
POM-BIMS-ECO-EwE Endtoend Yes DY 3 NA
10 RegionalOceanModelSystem(ROMS)andEastern BoundaryUpwellingSystems(BiOEBUS)and Object-orientedSimulatorofMarineecOSystems Exploitationmodel(OSMOSE)
ROMS-BioEBUS-OSMOSE Endtoend Yes SP-DY 5 NA
11 RegionalOceanModelSystem(ROMS)andN2P2Z2D2
biogeochemicalmodelandObject-orientedSimulatorof MarineecOSystemsExploitationmodel(OSMOSE)
ROMS-N2P2Z2D2-OSMOSE Endtoend Yes SP-DY 12 NA
12 NorwegianSeaEcosystem,End-to-End NORWECOM.E2E Endtoend Yes SP-DY 6 NA
13 EcologicalReGionalOceanModel(ERGOM)andModular OceanModel(MOM)andFishModel
ERGOM+MOM+Fish Endtoend Yes DY 2 VOD
14 ECOSystemModel(ECOSMO)andStochasticMulti-Species model(SMS)
ECOSMO-SMS Endtoend Yes SP-DY 2 NA
15 EuropeanRegionalSeasEcosystemModel(ERSEM)and PrincetonOceanModel(POM)andObject-oriented SimulatorofMarineecOSystemsExploitationmodel (OSMOSE)
ERSEM-POM-OSMOSE Endtoend Yes SP-DY 10 NA
16 Hubbell’sneutralmodelofbiodiversity(HNM) HNM Meta-community No ST 1 NA
17 EcopathwithEcosim(EwE) EwE Multispecies No ST-DY-SP 136 PE-VOD*
18 NorthSeaThresholdgeneraladditivemodels(NStGAM) NStGAM Multispecies No DY 4 BOOT
19 Population-DynamicalMatchingModel(PDMM) PDMM Multispecies No DY 1 VOD
20 BayofBiscayQualitativetrophicmodel BoBQualit Multispecies No ST 1 NA
21 Length-basedmultispeciesmodel(LeMANS) LeMANS Multispecies No DY 2 VOD
22 StochasticMulti-Speciesmodel(SMS) SMS Multispecies No DY 2 VOD
23 ProudmanOceanographicLaboratoryCoastalOcean ModellingSystem(POLCOMS)andEuropeanRegionalSeas EcosystemModel(ERSEM)
POLCOMS-ERSEM Physical
(hydrodynamic)–biogeochemical
Yes SP-DY 6 NA
24 3DGeneralEstuarineTransportModel(GETM)and EuropeanRegionalSeasEcosystemModel(ERSEM)
GETM-ERSEM Physical
(hydrodynamic)–biogeochemical
Yes SP-DY 16 VOD*
25 PrincetonOceanModel(POM)andBlackSeaIntegrated ModellingSystem-Ecosystem(BIMS-ECO)
POM-BIMS-ECO Physical
(hydrodynamic)–biogeochemical
Yes DY 4 NA
C.Piroddietal./EcologicalIndicators58(2015)175–191179
26 St.PetersburgEutrophicationModel(SPBEM) SPBEM Physical
(hydrodynamic)–biogeochemical
Yes SP-DY 7 VOD
27 EuropeanRegionalSeasEcosystemModel(ERSEM)and PrincetonOceanModel(POM)
ERSEM-POM Physical
(hydrodynamic)–biogeochemical
Yes SP-DY 11 NA
28 3DGeneralEstuarineTransportModel(GETM)and EcologicalRegionalOceanModel(ERGOM)
GETM-ERGOM Physical
(hydrodynamic)–biogeochemical
Yes SP-DY 8 VOD*
29 BAlticSeaLong-Termlarge-ScaleEutrophicationModel (BALTSEM)
BALTSEM Physical
(hydrodynamic)–biogeochemical
Yes SP-DY 7 VOD
30 BiogeochemicalFluxModel(BFM)andPrincetonOcean Model(POM)
BFM-POM Physical
(hydrodynamic)–biogeochemical
Yes SP-DY 5 NA
31 BlackSeaEcosystemModel BSEM Physical
(hydrodynamic)–biogeochemical
Yes SP-DY 13 VOD*-STAT
32 EcologicalReGionalOceanModel(ERGOM)andModular OceanModel(MOM)
ERGOM+MOM Physical
(hydrodynamic)–biogeochemical
Yes SP-DY 7 VOD
33 ECOSystemModel(ECOSMO) ECOSMO Physical
(hydrodynamic)–biogeochemical
Yes SP-DY 6 NA
34 MOHIDandPelagicBiogeochemicalModel(LIFE) MOHID-LIFE Physical
(hydrodynamic)–biogeochemical
Yes SP-DY 4 VOD*
35 NucleusforEuropeanModellingoftheOceans(NEMO)and BiogeochemicalFluxModel(BFM)
NEMO-BFM Physical
(hydrodynamic)–biogeochemical
Yes SP-DY 10 NA
36 RegionalOceanModelSystem(ROMS)andEastern BoundaryUpwellingSystems(BiOEBUS)
ROMS-BioEBUS Physical
(hydrodynamic)–biogeochemical
Yes SP-DY 6 NA
37 RegionalOceanModelSystem(ROMS)andN2P2Z2D2
biogeochemicalmodel
ROMS-N2P2Z2D2 Physical
(hydrodynamic)–biogeochemical
Yes SP-DY 12 NA
38 SwedishCoastalandOceanBiogeochemicalmodel(SCOBI) andRossbyCenterOceancirculationmodel(RCO)
RCO-SCOBI Physical
(hydrodynamic)–biogeochemical
Yes SP-DY 7 VOD
39 EcologicalNicheFactorAnalysis(ENFA) ENFA SDM/HabitatSuitabilityModels No ST 1 NA
40 BayofBiscayHabitatsuitabilitybasedonGeneralised AdditiveModels(GAM)
BoBGAM SDM/HabitatSuitabilityModels No ST 1 NA
41 BayofBiscayHabitatsuitabilitybasedonGeneralised LinearModels(GLM)
BoBGLM SDM/HabitatSuitabilityModels No ST 1 NA
42 HabitatsuitabilitybasedonMaxEnt(MaximumEntropy) MaxEnt SDM/HabitatSuitabilityModels No ST 2 NA
43 Niche-TraitModel(NTM) NTM SDM/HabitatSuitabilityModels No ST 1 NA
44 Process-drivenhabitatmodel PDH SDM/HabitatSuitabilityModels No ST 1 NA
180 C.Piroddietal./EcologicalIndicators58(2015)175–191 compositionand abundanceand theirvariation withina meta-
community(Huguenyetal.,2007).
3.5. Bio-opticalmodels
Theopticalpropertiesofbiologicalmaterials,suchasphyto- planktonicor heterotrophicunicellular organisms, are analysed andthenmodelledtopredictdistributionsofbiologicalcommuni- tiesoverwidespatialareas(withremotesensingdata)orinterms ofexpecteddepthlimitationsthatcanbeinferredfrommodelling studies.Bio-opticalmodelsarebasedonvariousfundamentalthe- oriesofopticswhichapplytoasingleparticlemakinguseofasetof equations/algorithms(MorelandMaritorena,2001;IOCCG,2006).
3.6. Hydrodynamic–biogeochemicalModels
Thesearemainlycoupledhydrodynamicandbiogeochemical modelstocaptureglobalscalepatternsinphysical–chemicalcom- ponentsaffectinglowertrophiclevelgroups(e.g.,phytoplankton andzooplankton)(Gnanadesikanetal.,2011;JørgensenandFath, 2011).
3.7. End-to-endmodels
Inrecentyears,hydrodynamic-biogeochemicalmodels(orjust biogeochemical models) have been coupled with multispecies models.Thesesocalledend-to-end(E2E)modelscombinephysi- cochemicaloceanographicprocesseswithorganismsrangingfrom lowtrophiclevel(LTL)tohighertrophiclevelorganisms(HTL)into asinglemodellingframework(Traversetal.,2009).
Ofthemodelsreportedinthisstudy,morethanhalfwerecou- pledecologicalmodels(Table1).Themostcommontypeofmodels currently in the catalogue were hydrodynamic-biogeochemical models (36%) followed by end-to-end (18%), species distribu- tion/habitatsuitability,bio-opticaland multispecies (14%each), biogeochemicalandmeta-community(2%each)models(Table1).
In the framework of ecological studies, physical–biological interactionsarethemainfactorsthatcanbetterdescribeecosystem propertiesandthespatialand/ortemporalevolutioninfunction ofrelevantpressuresidentified,climatechangeoranthropogenic impacts.Thisis reflectedinthechoiceof modellingapproaches andinthegrowingneedtocoupledifferenttypesofmodelswithin a singlemodellingframework (Traverset al., 2009;Roseet al., 2010).Thisisparticularlytrueifthemodelsareintendedtopredict changesandprovideguidanceinaframeworkofbiodiversitycon- servationandecosystem-basedmanagement(Traversetal.,2009;
Kaplanetal.,2012).
Recentsoftwaredevelopments,withinthecurrent(DEVOTES) andformerEUprojects(e.g.,MEECEhttp://www.meece.eu/),have shownthatthesemodels(hydrodynamic-biogeochemicalandmul- tispeciesmodels)canbecoupledtoruntogether.Thisrepresentsa powerfultoolforscenariotestingofclimatechangeandanthro- pogenic impacts simultaneously. There is a growing trend for E2Emodelling,whichincludesanthropogenicandphysicaldrivers behind observed changes, identifying both direct and indirect causes(Fulton,2010;Shinetal.,2010b;Travers-Troletetal.,2014), andsobetterfacilitatesthesettingoftargetsandimplementation ofmanagementmeasures(Curyetal.,2008;Kaplanetal.,2012).
Fig.1illustratesthecapacityofthesevenmodeltypestorepre- sentthedifferentcomponentsofmarineecosystems,includingor excluding,humancomponentsand/orclimateimpacts.
Coupled(bothE2Eandhydrodynamic-biogeochemicalmodels) andbio-optical(remotesensing)modelsincludedinthiscatalogue wereprimarilyspatiallydynamicand5outof30modelswerealso
dynamic.Theremainingmodelsweremainlystaticwithonly5 outof14modelspresentingdynamicandspatialmodulesaswell (Table1).Thisisanimportantandinterestingresultsincespatial- dynamicmodelsareabletoprovidegreatercapacityforforecasting ofecosystemdynamics,althoughtheyrequireamoredatainten- sivecalibration(e.g.,theinitialtestingandtuningofamodel)and validation(e.g.,thecomparison/fittingofmodelwithadataset representing“local”fielddata)approaches(Jørgensen,2008).
Atotalof201model-derivedindicators(seeS1ofsupplemen- tarymaterials)wereincludedinthiscatalogue,ofwhichmorethan halfwereconsideredtobe“operational”(64%),whilethemajor- ityoftheremainderwerestill“underdevelopment”(33%),with onlyafew“conceptual”approaches(3%)presented(Table2).We acknowledgethatsomeindicatorsmighthavechangedtheirstatus sincethetimeofthissurvey(e.g.,someindicators“underdevelop- ment”mayhavebeenassessedandnowclassifiedas“operational”) butforthepurposeofthisworkwedecidedtokeeptheminthe statusofdevelopmentthattheywerereportedduringthesurvey.
EcopathwithEcosim(EwE)wasnotablyassociated withthe largestnumberofmodel-derivedbiodiversityindicators(Table2).
However, the majority of these biodiversity indicators were biomassesofspeciesorgroupsofspeciesatdifferenttrophiclevels ofthefoodweb.Foreaseofcharacterisation/evaluation,model- derivedindicatorsweregroupedintosevenmajorcategories(see Table3forthedetailedlist).Notsurprisingly,biomassindicators constitutedthe largestgroupwithapproximately57% followed bydiversityindices(13%)andphysical,hydrologicalandchemical indicators(12%).Regardingtargetsand/orreferencevaluesassoci- atedwithmodel-derivedindicators,thecataloguehighlightsthat only fewmodels in fewareas had assigned target orreference values,despitethefactthatthemajoritywereconsidered“opera- tional”(i.e.developed,testedandvalidated).Thisisthecaseoffully developedmodelsforwhichvalidatedoutputsexist(e.g.,BSEMby Dorofeevetal.,2012),butunderpolicycontextssuchastheMSFD, lacktestedandvalidatedreferencevaluesortargetscompliantwith specificlegalrequirements.
Also,veryfewofthereportedmodelshavebeenusedtoclearly assesstheeffectsofmeasurestomeetthetargetsthatwilleven- tuallybeestablished.Forinstance,multispeciesmodelshavebeen appliedintheIonianSeaandintheNorthSeaecosystemstoassess thereductioninfishingeffortasameasureto(a)bouncebackcom- mondolphinpopulations(e.g.,EwEmodelbyPiroddietal.,2011);
(b) assess theresponse of selected biodiversity indicators (e.g., PDMMbyShephardetal.,2013;Fungetal.,2013,orEwEmodelby LynamandMackinson,inpress);(c)testtheeffectofselectivefish- ingoncommunitybiodiversityconservation(e.g.,LeMANSmodel byRochetetal.,2011)andimplementedintheBayofBiscay(e.g., OSMOSEmodelbyChiffletetal.,2014)toevaluatetheeffectof differentfishingscenariosonsmallpelagicfishstocks.
Inaddition,notallthemodelswereabletoaddressuncertainty;
themajority(61%)lackedanapproach todetermineconfidence intervals/rangeofuncertaintyorrequiredfurthervalidationwork forindicators.Thisisareflection,asmentionedabove,ofthetypeof datapresentinthecataloguewhicharemorespatial-dynamicthan staticandforwhichvalidationismoredifficulttoobtain.Fromthe modelsthatreportedaddressinguncertainty(39%),datacompari- sonanddatavalidation(e.g.,modeloutputsfittedtosurveyeddata) wasthemostcommonmethodreported(Table1).
4. Modelpotentialtoaddressdescriptorsandindicatorsfor biologicaldescriptors
IntermsofsupportingtheMSFD,ecologicalmodelscanbethe mosteffectivemeanstomodelrelationshipsbetweenactivities, pressures,stateand thusindicators(Jørgensen, 2008;Jørgensen
C.Piroddietal./EcologicalIndicators58(2015)175–191 181
Fig.1. Illustrationofmodelscapacitytodescribetheecosystem,fromspecificprocessesintegratingbiologicalcompartmentsandtheassociatedabioticenvironmenttothe entireecosystemincluding,ornot,humancomponentsorclimateimpacts.Inparticular,1and7–refertobiogeochemicalandcoupledphysical–biogeochemicalmodels;
2and3–refertomultispeciesmodels(eitheratspeciesoratfoodweblevel);4–Speciesdistribution/HabitatSuitability;5–meta-communitymodelsand6–bio-optical models.E2Emodelsencompassallofthem.
and Fath,2011).Thisis because ofthe integrative characterof thesemodellingapproachesthatoftenconsidermanyecosystem componentsfromabioticfactorstobiotic interactions andpro- cesses.The 44 modelsavailable in the catalogue werecapable ofaddressingindicators in8of the11descriptors oftheMSFD (Table2)although,duetothefocusofthissurveywhichprimarily dealtwiththefourbiodiversityrelateddescriptors,theirmodelling potentialwasstrongerfortwo ofthesebiodiversitydescriptors:
biologicaldiversity(D1)andfoodwebs(D4).Nevertheless,human inducedeutrophication(D5),hydrographicalconditions(D7)and commercialfishandshellfish(D3)werewelladdressedbythemod- elsinthiscatalogue.
Within the biodiversity related descriptors, non-indigenous species (D2) and seafloor Integrity (D6) were the most poorly addressedbythemodelscurrentlyinthecatalogue(Table2).How- ever,Pinnegaretal.(2014)showshowEwEmodelscanbeuseful inassessingtheresponseofanecosystemtotheintroductionof invasivespecies(D2).Similarly,increasingthespatialresolution ofmanyofthecurrentmodelswouldfurtherimproveourunder- standingofthedirecteffectoffishingandotheractivities(such asdecommissioningofoilrigsordevelopmentofa windfarm) onseafloorintegrity(D6).Inseveralcases,modelshavebeenused toinvestigatetheimpactsoftrawlingandtestfisheriesscenarios (e.g.,highresolutionERSEM-POMmodel,Petihakisetal.(2007)).
However,mostofthemodelsconsideredinthiscataloguedonot explicitlyincludedescriptionsofthesetypesofpressuresonthe marineenvironment,theydonot linktobenthichabitatlayers,
andtheirunderstandingofpressuresandimpactsisinmanycases stilllimitedbyscarceempiricalinformation(HooperandAusten, 2014).
Typically,asinglemodelwascapableofaddressingmorethan oneMSFDdescriptorandsometimesuptosix,asisthecaseofEwE (Table2).Asaresult,thesamemodelmaybenotedforhavingindi- catorsinmultiplestagesofdevelopment(e.g.,operational,under developedorconceptual)eitheracrossdescriptorsorwithinthe samedescriptor.Thisis becausethereportedstatusofdevelop- mentrelatesnottothemodelitselfbuttothedifferentindicators thatcan bederived fromthemodel.Thepotentialoftheavail- ablemodelstoaddressMSFDindicatorsspecificallythosewithin biologicaldescriptorswasevaluatedbyextractingthenumberof indicators(outlinedintheEuropeanCommission(2010))thateach modelcaninformon(Table2).Allmodelscouldaddressmulti- pleindicators,fromthesetof21MSFDindicatorsunderthese4 descriptors.Infact,20modelsinthecataloguehadthepotentialto addressatleasthalfoftheseindicators.Despitethehighpotential ofthemodelstoaddressMSFDindicators,notalloftheavailable model-derivedindicatorswerefullyoperational(seeSection2for definitionandTable4).Themeanpercentageofoperationalmodel- derivedindicatorsacrossallMSFDindicatorswas64%.Ouranalysis alsorevealedthattherewerethreeindicatorsrequiredunderthe biodiversity descriptors for which nomodel-derived indicators were available in thecatalogue (Table 4): D1C3-I2: population geneticstructure;D2C2-I1:Ratiobetweeninvasivenon-indigenous speciesandnativespeciesandD2C2-I2:Impactsofnon-indigenous
182C.Piroddietal./EcologicalIndicators58(2015)175–191
Table2
Models’capabilityperthe11MarineStrategyFrameworkDirectivedescriptors(D)assessedbythenumberofindicatorsprovidedbyeachmodel(fornames,seeTable1).Thedevelopmentstatusoftheindicatorsisindicated(op:
operational,ud:underdevelopment,co:conceptual).ThelastcolumnsummarisesthenumberofMSFDofficialindicators(EuropeanCommission,2010)ofD1,D2,D4andD6(checkTable4)thatthemodel-derivedindicators caninformon.
D1 D2 D3 D4 D5 D6 D7 D8 D9 D10 D11 #MSFDindicators
addressedunder D1,D2,D4,D6 Biological
diversity
Non- indigenous species
Commercial fish
Food webs
Human- induced eutrophication
Seafloor integrity
Hydrological alterations
Contaminants Contaminants infood
Marine litter
Energy/
noise
1 BALTSEM 7op 5op 3op 2op 16
2 BFM-POM 5op 3op 2op 2op 14
3 BSEM 6op/7ud 1op/1ud 1op/7ud 4ud 3op 9
4 EwE 82op/82ud/7co 1ud 53op/57ud/4co 82op/82ud/7co 13op/14ud/2co 17op/25ud/4co 13(+1a)
5 ECOSMO 6op 3op 2op 3op 14
6 ECOSMO-SMS 2ud 2ud 2ud 8
7 ENFA 1op 1op 1op 14
8 ERGOM+MOM 7op 5op 3op 2op 16
9 ERGOM+MOM+fish 2op 2op 2op 7
10 ERSEM 2ud 2ud 1ud 12
11 ERSEM-POM 11op 6op 3op 5op 14
12 ERSEM-POM-OSMOSE 10ud 10ud 10ud 9
13 BoBGAM 1op 1op 1op 16
14 GETM-ERGOM 8ud 2ud 4ud 6ud 14
15 GETM-ERSEM 16ud 5ud 8ud 2ud 11ud 19
16 BoBGLM 1op 1op 1op 16
17 GOTM-ERSEM-EWE 6ud 4ud 6ud 3ud 8
18 HNM 1co 1co 1co 1co 16
19 BS-IOPs 3ud 2ud 3ud 8
20 LeMANS 2op 2op 2op 7
21 MaxEnt 2op 1op 1op 2op 17
22 MOHID–LIFE 4op 3op 3op 1op 10
23 NEMO-BFM 10ud 7ud 4ud 3ud 17
24 NSOP 1ud 1ud 1ud 8
25 NStGAM 4ud 2ud 4ud 1ud 10
26 NORWECOM.E2E 6op 3op 2op 3op 14
27 NTM 1ud 1ud 1ud 9
28 PDMM 1op 1op 1op 7
29 POLCOMS-ERSEM 6op 3op 2op 3op 14
30 POM-BIMS-ECO 4op 3op 2op 1op 14
31 POM-BIMS-ECO-EWE 3ud 3ud 3ud 9
32 PDH 1ud 1ud 1ud 11
33 BS-PSD(PSC) 3ud 3ud 3ud 5
34 BoBQualit 1co 1co 1co 8(+1a)
35 RCO-SCOBI 7op 5op 3op 2op 16
36 BS-Chl&CDM 4ud 4ud 4ud 6
37 BS-PAR 1ud 3
38 BS-SPP 1ud 1ud 1ud 3
39 ROMS-BioEBUS 6op 3op 2op 3op 14
40 ROMS-BioEBUS-OSMOSE 5ud 5ud 5ud 9
41 ROMS-N2P2Z2D2 12op 8op 5op 4op 13
42 ROMS-N2P2Z2D2-OSMOSE 12op 12op 12op 11
43 SMS 2op 2op 2op 7
44 SPBEM 7op 5op 3op 2op 16
Numberofmodelsperdescriptor 44 3 17 43 26 5 17 0 1 0 0
aNewproposalsforDescriptor4FoodWebs,notyetconsideredunderthesetofIndicatorsoutlinedintheEUCommissionDecision(EuropeanCommission,2010).
C.Piroddietal./EcologicalIndicators58(2015)175–191 183
Table3
Themodel-derivedindicatorsgroupedinto7majorcategories,basedonwhatthe indicatorsinformon,withtheiroverallpercentagesintheDEVOTESCatalogueof model-derivedindicators.
Typeofindicators %
1 Biomass 57
2 Diversityindicators Biodiversityindices(e.g., Kemptondiversityindex, trophiclevelofthe community)and species/habitatdiversity, proportionsincommunity
13
3 Primaryorsecondary production
9 4 Spatialdistribution
indicators
Speciesspatialdistribution 6 5 Specieslife-history Traitssuchasfore.g.,
length,weightorlifespan 1 6 EcologicalNetwork
Analysis(ENA)indicators
Flows,energiesand efficiencies
2 7 Physical,hydrologicaland
chemical
Describingeitherhabitat integrityorpressures
12
invasivespecies at thelevelof (1) species, (2)habitats and (3) ecosystem.
Additionally,itisnoteworthythatthepotentialofmodelling approachestoaddressecosystemfundamentalpropertiessuchas D1C8I1“Interactionsbetweenstructuralcomponents”andD1C8I2
“Servicesprovided”(Table4)washigh.Theseaspects,despitebeing clearlymentionedintheEuropeanCommission(2010),werenot partoftheMSFDindicatorsset,mostprobablydue tothediffi- cultyindefiningthem throughspecificindicators.Nevertheless, themajorityofthemodel-derivedindicatorsincludedinthiscat- alogue(189outofthe201)havethepotentialtoinformonthese complex,integrativeecosystemdimensions.Inanycase,although thecatalogueshowsthepotentialofmodelstoaddressEcosystem Services(ES,sensuLiqueteetal.,2013),thesurveyperformedcan- notinformadequatelyonthecapacityoftheindicatorstosupport policy-makers’useoftheseESconcepts.Thisisacurrentlimita- tionoftheMSFDsetofindicators(Table4)whichdoesnotclearly requiretheassessmentofecosystemsservices,despitethefactthat in2011,asapartyoftheConventiononBiologicalDiversity(CBD), theEuropeanUnion(EU)adoptedanewstrategy(theBiodiversity Strategyto2020),whichintegratesESaskeyelementsforthecon- servationapproachtobiodiversity(Maesetal.,2012).Theroleof ESinsupportingconservationinitiativesandsocio-economicactiv- itiescallsforactiontomonitor,quantifyandvaluetrendsinthese services,soastoensurethattheyareadequatelyconsideredin decisionmakingprocesses.Todoso,aclearlinkageneedstobe establishedbetweenbiodiversityandecosystemfunctioningand thediversityandcomplexityofthebenefitstheyprovide,i.e.the ecosystemsservices(beitprovisioning,regulatingorcultural),in ordertoallowthedevelopmentofoperationalindicators.Yet,the indicatorsavailablearenotcomprehensiveandareofteninade- quatetocharacteriseES;dataareofteneitherinsufficientorthe linkagesarepoorlyunderstoodtosupporttheuseoftheseindica- tors(Liqueteetal.,2013).
4.1. Biodiversitycomponentsandhabitats
Habitatsand speciesarekeyattributesofbiologicaldiversity andtheiroccurrence,distributionandabundanceisusedascriteria toassesstheecosystemstatus(Table5).ToattainGEnSforD1,as statedintheMSFD,“nofurtherlossofbiodiversityatecologically relevantscaleshouldoccur,and,ifitdoes,restorationmeasures shouldbeputinplace”.ThedefinitionofGEnSisdependenton theecologicalrelevanceandisapproachedatdifferentscalesof
complexity,fromspeciestohabitats,communitiesandecosystem (seeBorjaetal.,2013).
Biodiversity components indicated in the MSFD include microbes, phytoplankton, zooplankton, angiosperms, macroal- gae,benthicinvertebrates,fishes,cephalopods,marinemammals, reptilesandbirds,withspecificsubgroupswithinthelastfourcat- egories.Theirinclusioninecologicalmodelslistedinthecatalogue washighlyheterogeneous.Operationalmodel-derivedindicators concernedmainlyfish,phytoplankton,zooplankton,benthicand pelagicinvertebratesandmarinemammals(total64,45,31,23,and 17,respectively)(Fig.3),whiletheremainingbiodiversitycompo- nentswerecoveredwithlessthan10indicatorseach.Thisreflects thetraditionalfocusofmarineecosystemmodelling,drivenmainly bythewide-spreaduseoflowtrophiclevelmodelsrelatedtothe bottom-up forcing of production, and in parallel, motivatedby fisheriesorientedpoliciesandconservationinterestsinparticular species(Roseetal.,2010;Shinetal.,2010b).
Asexpected,thevariousmodelshaveusedsimilarcomponents differently and, dependingontheirfinal goal,theresolution of thebiodiversitycomponentsdifferedgreatly:fromsingletomulti- speciesmodels,inclusionofsingleormultiplefunctionalgroups andintegratingbothLTLandHTLkeyorganisms(e.g.,Oguzetal., 1999;LewyandVinther,2004;Schrumetal.,2006;Colletal.,2008;
Rossberg etal., 2010;Lassalle etal.,2011; Mateuset al.,2012;
Tsiarasetal.,2012).Ofthemodelscatalogued,onlyHubbell’sneu- tralmodelandthePopulation-DynamicalMatchingModel(PDMM) resolvebiodiversityatspecieslevel,andonlythePDMMdoesso through the entire marine foodchain (Fung et al., 2013). EwE model-derivedindicators, either operational,conceptualor still underdevelopment,havebeenusedtomodelalltypesofbiodi- versitycomponents(excludingmicrobes),withfishbeingthemost frequentlyassessedgroup(25%)followedbybenthicinvertebrates (15%),marinemammals(12%)andcephalopods(11%).Themicro- bialcomponent,asreportedinthecatalogue,wasonlyevaluatedby ERSEM-POMintheAegeanSeaandunderdevelopmentbyNEMO- BFM in theBaltic Sea. Whenmodelswere organisedaccording tomodeltype,multispeciesmodelsassessedthemajorityofbio- diversitycomponentswiththeexceptionofmicrobesthat were mostlyevaluatedbycoupledhydrodynamic–biogeochemicalmod- els(Fig.3).
Thepredominanthabitattypesthatshouldbeassessedwithin theevaluationofthestatusundertheMSFD arewater-column, seabedand icehabitats,withecologicalmodelsreferringtoone orseveralofthesehabitats.Inourcatalogue,ofallpredominant habitats, water-column was the most comprehensively evalu- ated habitat,eitheronits own,or in relationtothe othertwo habitats. There were only two instances where seabed habi- tats were evaluatedontheir own.Ice-associated habitats were assessedbyhydrodynamic–biogeochemicalandmultispeciesmod- els while seabed habitats were evaluated in multispecies and SDM/Habitatsuitability/Communitymodels.Multispeciesaswell ascoupled(bothhydrodynamic–biogeochemicalandE2E)mod- elsweremainlyusedfortheassessmentofspeciesorgroupsof species/organismsthatcanbelinkedtowater-columnhabitats.
Examiningtheintersectionbetweenmodel-derivedindicators and habitats, the water column was the most widely covered habitat,specificallythecontinentalshelfwhereallcomponentsof biodiversitywerecovered(Table5).Themarineoceanicwatercol- umnwasalsowidelycovered;however,inthiscasemicrobeswere notevaluated.Inestuaries,onlyphytoplanktonandzooplankton wereassessed,whichwerealsothemaincomponentsmodelled inice-associatedhabitats.In theseabedhabitat,shallowsublit- toralmixedsedimentswerethemostcommonlyevaluatedwith model-derivedindicators assessing7 out ofthe11 biodiversity components.Invertebratesweremainlystudiedinrelationtothe water columnover thecontinental shelfalthough theyare also