Fine mapping of a QTL on bovine chromosome 6 using imputed full sequence data suggests a key role for the group-specific component (GC) gene in clinical mastitis and milk production

Association studies with imputed sequence variants were performed using seven correlated udder conformation traits as response variables.. The calculation of an approximate

Original versus predicted breeding values for protein yield for the two methods (GBLUP and BSSVS) using the three types of data (BovineHD, ImputedHD, and imputed sequence) for the

Then, we used whole‑ genome sequence data from three pig lines to calculate: a variant intolerance score that measures the tolerance of genes to protein coding variation; an

A limited number of previous studies have attempted to locate genomic regions associated with endo-parasitic diseases in cattle, but none used antibody response or liver

This study compares the performance of three marker densities to refine six previously detected QTL regions for mastitis traits: 54 k markers of a medium-density SNP (single

When the genotypes were inferred using Minimac and a multi-breed reference population, rs385640152 was the most significantly associated variant, which reflected higher accuracy

For each trait, animals with both phenotype and genotype data were divided into three non-overlap- ping groups: (1) a QTL discovery set for a GWAS with imputed WGS data to

the QTL for de novo fatty acid synthesis mapped close to a known candidate gene (ACSS2), but subsequent refined analyses highlighted that ACSS2 had little effect and that SNPs