Supplemental Table 1. Phenotypic characteristics that are variable among strains of Pseudomonas cannabina or Pseudomonas syringae pv.
alisalensis.
species P. cannabina emend. P. syringae
genomospecies G9 G3 G1
Pathovars P. cannabina pv. cannabina P. cannabina pv. alisalensis pv. tomato pv. maculicola pv. syringae
Phenotypic charactersa
CFBP 2341T
CFBP 1619
CFBP 1631
LMG 5540
LMG 5650
CFBP 6866Pt
CFBP 6867
CFBP 6869
CFBP 6873
CFBP 6875
CFBP
1637 CFBP 2212Pt CFBP 1657Pt CFBP 1392T
Ice nucleation
+ NTc + NT NT + + + + + NT - - +
Hydrolysis of
Gelatin
- - - NT NT - - - - - - - - +
Tween 80
+ + + NT NT + + + + + + + + -
Acid from
Erythritol
- - - NT NT - - - - - - - - +
Mannitol
- - - NT NT + + + + + + + + +
Utilization of
DL-Lactate
- - - NT NT - - - - - - - - +
Assimilation of
i-erythritol
- - - - - - - - - - - - - +
meso-tartrate
- - - - - - - - - - - + + -
trans-aconitate
- - - - - - - - - - - + + +
DL-lactate
- - - - - - - - - - - - - +
DL-glycerate
- - - - - - - - - - - + + +
DL- -β
hydroxybutyrate
- - - - - - - - - - - - - +
Sucrose
- - - - - + + + + + + + + +
D(+) arabitol
- - - - - + + + + + + + + +
Myo inositol
- - - - - + + + + + + + + +
D-mannitol
- - - - - + + + + + + + + +
D(-) tartrate
- - - - - + + + + + + + + -
D(+) malate
- - - + - + + + + + + + + -
D-galacturonate
- - - + - + + + + + + + + -
Protocatechuate
- - - - - + + + + + + + + -
(-) quinate
- - - - - + + + + + + + + -
D-alanine
- - - - + + + + + + + + + +
Alpha-
ketoglutarate
- - - - - + + + + + + + + +
Putrescine
- - - - - - + + + + + - - -
D(+) trehalose
+ + + - - - - - - - + - - -
Esculin
+ - + - + - - - - - - + + +
L(+) arabinose
- + - - - + + + + + + + + +
D(+) xylose
- + - + - + + + + + + + + +
D-tagatose
- + - - - - - - - - - - - -
D-sorbitol
- - - - - + + - + - - + + +
D-lyxose
- - - - - + + + + - - - + -
cis-aconitate
- - - - - - - + + + + + + +
Trigonelline
- - - - - - - + + + + + + +
Betain
- + - - + + + + + + + + + +
DL-alpha- amino-n-
butyrate
- + - - - + + + + + + + + +
Caprate
- - - - - + + - - - - + + +
Caprylate
- - - - - + + - - - - + + -
Succinate
+ - + + + + + + + + + + + +
Fumarate
+ - + + + + + + + + + + + +
Glutarate
- - - - - + + - + - + - - -
Malonate
+ - + + - + + - + + + + + -
L-tyrosine
- - - - - - - - - - + - + -
p-
hydroxybenzoate
- - - - - + - + - + + + + -
Proprionate
- - - - - - - - + + + - + +
Polypectate pH 5
+ + - NT NT - - - - - - - + -
Polypectate pH 8
- - - NT NT - - - - - + - - -
a
genomonspecies as delineated by Gardan et al. [19].
b
Test for which all strains tested were positive included: D-glucose, D-fructose, D-galactose, D -Mannose, D-ribose, glycerol, D-saccharate, mucate, L-malate, citrate, D-glucuronate, D-gluconate, L-aspartate, L-glutamate, L-proline, L-alanine, L-serine, acid from saccharose. In addition, all strains were negative for the assimilation of Pectine, Nitrate reduction, utilization of L(+) tartrate, and DNAse activity as well as for the 44 Biotype characters not listed here.
c
NT = Not tested.
Supplemental Figure 1. Symptoms of diseases caused by Pseudomonas cannabina or Pseudomonas syringae pv. alisalensis on Canabis sativa, and Brassica rapa subsp. rapa.
Pseudomonas cannabina CFBP 2341
TPseudomonas syringae pv. alisalensis CFBP 6866
PtMarijuana, Canabis
sativa
Broccoli raab, Brassica rapa subsp.
rapa
Oat, Avena sativa
In multiple experiments with multiple replications, broccoli raab and oat leaves inoculated
with P. cannabina occasionally had some symptoms. However, P. cannabina has not been
reisolated from surface disinfested symptomatic tissue.
Supplemental Figure 2.
Dendrogram of phenotypic characteristics based on Unweighted Pair Group Method with Averages. Distance = 1 – Jaccard coefficient.
CFBP, Collection Française de Bactéries Phytopathogènes, Angers, France. Genomospecies 1-9 of the « P. syringae » cluster (G1-G9).
P. cannabina pv. alisalensis CFBP 6866Pt (G9)
P. cannabina pv. cannabina CFBP 2341T (G9) P. syringae pv. maculicola CFBP 1657Pt (G3) P. cannabina pv. alisalensis CFBP 6867 (G9)
0.1 0.2 0.3 0.4 0.5
0
0.5370
P. cannabina pv. alisalensis CFBP 6873 (G9) P. cannabina pv. alisalensis CFBP 6875(G9) P. cannabina pv. alisalensis CFBP 6869 (G9) P. cannabina pv. alisalensis CFBP 1637 (G9)
P. syringae pv. tomato CFBP 2212Pt (G3)
P. syringae pv. syringae CFBP 1392T (G1) P. cannabina pv. cannabina CFBP 1619 (G9)
P. cannabina pv. cannabina CFBP 1631 (G9)