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Comparative Evaluation of Etest, EUCAST, and CLSI Methods for Amphotericin B, Voriconazole, and Posaconazole against Clinically Relevant Fusarium
Species
Abdullah M. S. Al-Hatmi, Anne-Cecile Normand, Stephane Ranque, Renaud Piarroux, G. Sybren Hoog, Joseph Meletiadis, Jacques F. Meis
To cite this version:
Abdullah M. S. Al-Hatmi, Anne-Cecile Normand, Stephane Ranque, Renaud Piarroux, G. Sybren Hoog, et al.. Comparative Evaluation of Etest, EUCAST, and CLSI Methods for Amphotericin B, Voriconazole, and Posaconazole against Clinically Relevant Fusarium Species. Antimicro- bial Agents and Chemotherapy, American Society for Microbiology, 2017, 61 (1), pp.e01671-16.
�10.1128/AAC.01671-16�. �hal-01521350�
Comparative Evaluation of Etest, EUCAST, and CLSI Methods for Amphotericin B, Voriconazole, and
Posaconazole against Clinically Relevant Fusarium Species
Abdullah M. S. Al-Hatmi,
a,b,cAnne-Cécile Normand,
dStephane Ranque,
dRenaud Piarroux,
dG. Sybren de Hoog,
a,bJoseph Meletiadis,
e,fJacques F. Meis
g,hCBS-KNAW Fungal Biodiversity Centre, Utrecht, The Netherlands
a; Institute of Biodiversity and Ecosystem Dynamics, University of Amsterdam, Amsterdam, The Netherlands
b; Directorate General of Health Services, Ministry of Health, Ibri Hospital, Ibri, Oman
c; Aix-Marseille University, APHM, CHU Timone, IP-TPT, Parasitology- Mycology, Marseille, France
d; Clinical Microbiology Laboratory, Attikon University Hospital, Medical School, National and Kapodistrian University of Athens, Athens, Greece
e; Department of Medical Microbiology and Infectious Diseases, Erasmus MC, Rotterdam, The Netherlands
f; Department of Medical Microbiology and Infectious Diseases, Canisius Wilhelmina Hospital, Nijmegen, The Netherlands
g; Department of Medical Microbiology, Radboud University Medical Centre, Nijmegen, The Netherlands
hABSTRACT We compared EUCAST and CLSI methods versus Etest for antifungal sus- ceptibility testing of 20 clinically relevant Fusarium species against amphotericin B, posaconazole, and voriconazole. The median Etest amphotericin B and posaconazole MICs were 1 dilution higher than the median EUCAST and the CLSI MICs. The essen- tial agreement (within ⫾ 1/ ⫾ 2 dilutions) was 60/90%, 80/95%, and 70/85% between the Etest and EUCAST methods and 80/95%, 75/95%, and 45/100% between the Etest and CLSI methods for amphotericin B, voriconazole, and posaconazole, respec- tively. The categorical agreement was ⬎ 85%. Etest can be used for antifungal sus- ceptibility testing of Fusarium species.
KEYWORDS Fusarium, antifungal susceptibility, comparison, CLSI, EUCAST, Etest, amphotericin B, posaconazole, voriconazole, TEF1, RPB2
O pportunistic infections due to Fusarium species are increasingly reported due to the rising numbers of immunocompromised patients, although immunocompe- tent individuals can also be infected (1). The most common opportunists are members of the F. solani species complex (SC), followed by F. oxysporum SC and F. fujikuroi SC (28). First-line antifungal treatment options are amphotericin B and voriconazole (2), while posaconazole has been recommended as salvage therapy. Posaconazole shows some in vitro activity against Fusarium spp., depending on the species (2, 3).
Although Fusarium spp. are resistant to many antifungals, we previously reported that this resistance was species specific, and species identification is essential for early antifungal treatment (2, 4).
Reference methods for antifungal susceptibility testing (AFST) and breakpoints (BPs) for Candida and Aspergillus spp. have been developed (5). However, species-specific BPs have not yet been established for Fusarium spp. Recently, Espinel-Ingroff et al. (6) established the epidemiological cutoff values (ECVs) for Fusarium spp. in order to differentiate wild-type from non-wild-type isolates. Although a reproducible method for AFST of Fusarium spp. has been described by the Clinical and Laboratory Standards Institute (CLSI) (7) and by the European Committee for Antimicrobial Susceptibility Testing (EUCAST) (8), both are based on broth microdilution (BMD) and are time-
Received 1 August 2016 Returned for modification 22 September 2016 Accepted 20 October 2016
Accepted manuscript posted online 24 October 2016
Citation Al-Hatmi AMS, Normand A-C, Ranque S, Piarroux R, de Hoog GS, Meletiadis J, Meis JF.
2017. Comparative evaluation of Etest, EUCAST, and CLSI methods for amphotericin B, voriconazole, and posaconazole against clinically relevant Fusarium species. Antimicrob Agents Chemother 61:e01671-16. https://
doi.org/10.1128/AAC.01671-16.
Copyright © 2016 American Society for Microbiology. All Rights Reserved.
Address correspondence to G. Sybren de Hoog, [email protected].
crossm
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consuming. Furthermore, the limited AFST data and the lack of comparison of the two reference BMD methods for Fusarium spp. prompted us to study the agreement between the CLSI and EUCAST methods for testing amphotericin B and triazoles against Fusarium spp. In addition, the Etest has been suggested as an alternative approach for AFST of amphotericin B or triazoles for non-Aspergillus molds in the clinical laboratory (9), but data on Fusarium spp. are limited. The objective of this study was to assess whether Etest could accurately measure the MICs of amphotericin B, voriconazole, and posaconazole for clinical Fusarium isolates in comparison with the CLSI and EUCAST methods.
Twenty clinical Fusarium isolates belonging to the species F. acutatum, F. chlamy- dosporum, F. delphinoides, F. dimerum, F. equiseti, F. fujikuroi, F. solani SC 5 (FSSC5), F.
incarnatum, F. keratoplasticum, F. lichenicola, F. napiforme, F. oxysporum, F. petroliphilum, F. proliferatum, F. sacchari, FSSC6, F. subglutinans, F. temperatum, F. thapsinum, and F.
verticillioides were subcultured on Sabouraud glucose agar (SDA, Difco) with 0.02%
chloramphenicol for 5 to 7 days at 35°C to 37°C. Molecular identification was performed using translation elongation factor-1 ␣ (TEF1 ␣ ) and the RNA polymerase (rPB2), as previously described (10). Strains were identified using the GenBank BLAST, Fusarium MLST, and Fusarium ID databases.
Susceptibility testing was carried using three different methods: BMD as described in the CLSI document M38-A2 (7), EUCAST E.Def 9.3 (8), and Etest manufacturer’s guide (bioMérieux SA, Marcy-l’Étoile, France). Drug concentration ranges in BMD for ampho- tericin B (Bristol-Myers Squibb, Woerden, The Netherlands), voriconazole (Pfizer Central, Sandwich, UK), and posaconazole (Merck, Whitehouse Station, NJ, USA) were 0.016 to 32 g/ml. For the CLSI M38-A2 and the EUCAST E.Def 9.3, the MICs of amphotericin B, voriconazole, and posaconazole were determined with an inverted magnifying mirror after 48 h at 35°C as the lowest drug concentration with complete inhibition of growth.
For the Etest, the inoculum concentration was adjusted to 0.5 McFarland standard (equivalent to 1 ⫻ 10
6to 5 ⫻ 10
6CFU/ml). Then, 0.5 ml of this suspension was inoculated onto plates containing RPMI 1640 agar with 2% glucose using a cotton swab. After a period of 15 min, the Etest strips were applied and incubated for 48 h at 35°C. The reading of the Etest MICs was performed as described and illustrated in the Etest guide, and the MIC was determined as the concentration at the intercept of the elliptical complete inhibition zone using four ATCC strains (Aspergillus flavus ATCC 204304, A. flavus ATCC 204305, Candida parapsilosis ATCC 22019, and Candida krusei ATCC 6258) as quality controls. To directly compare the Etest MICs with the EUCAST and CLSI MICs, the Etest MICs were converted to the nearest highest 2-fold dilution value that matched the CLSI and EUCAST 2-fold dilution scheme. MICs were transformed to log
2values, and differences were assessed statistically with a paired t test. The median and range of the log
2MIC differences between the methods were calculated. Micro- biologically significant differences between the methods were assessed, calculating the agreement within 1 and 2 2-fold dilutions. Finally, clinically significant differences were assessed by calculating categorical agreement among the three methods using previ- ously determined ECVs for Fusarium spp., namely 4 g/ml for amphotericin B, 4 g/ml for voriconazole, and 2 g/ml for posaconazole.
Table 1 summarizes the in vitro susceptibilities of 20 isolates of Fusarium spp. to amphotericin B, voriconazole, and posaconazole. The data are presented as MICs, MIC ranges, median MICs, and MIC
90. CLSI MIC results of amphotericin B spanned a narrow range of 1 to 4 g/ml. Overall, amphotericin B and voriconazole showed the most potent activity with all three methods. The median, range, and MIC
90with Etest, EUCAST, and CLSI were 2, 0.25 to ⬎ 32, and 16 g/ml; 1, 0.25 to 8, and 8 g/ml; and 1, 0.5 to 4, and 4 g/ml for amphotericin B; and 2, 0.25 to ⬎ 32, and 4 g/ml; 2, 0.5 to 16, and 4 g/ml; and 2, 0.5 to ⬎ 16, and 4 g/ml for voriconazole, respectively. Posacona- zole exhibited high MICs against F. chlamydosporum, F. dimerum, F. incarnatum, F.
napiforme, F. oxysporum, F. proliferatum, F. thapsinum, and all the reported species within F. solani species complexes, with median, range, and MIC
90of 32, 0.25 to ⬎ 32,
Al-Hatmi et al. Antimicrobial Agents and Chemotherapy
January 2017 Volume 61 Issue 1 e01671-16 aac.asm.org 2
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TABLE 1 MIC, median, range, and MIC
90obtained by antifungal testing of amphotericin B, voriconazole, and posaconazole for 20 Fusarium species as determined by the Etest, EUCAST, and CLSI methods at 48 h of incubation
CBS no. Species Method
MIC ( g/ml) of
a:
AMB VRC POS
CBS 130548 F. acutatum Etest 4 0.5 0.25
EUCAST 2 0.5 0.5
CLSI 1 1 2
CBS 635.76 F. chlamydosporum Etest 1 4 ⬎ 32
EUCAST 0.5 2 16
CLSI 1 2 ⬎ 16
CBS 120712 F. delphinoides Etest 0.5 4 4
EUCAST 0.5 4 2
CLSI 1 4 2
CBS 108944 F. dimerum Etest 0.25 4 ⬎ 32
EUCAST 1 2 16
CLSI 0.5 2 ⬎ 16
CBS 307.94 F. equiseti Etest 1 0.25 0.25
EUCAST 0.25 1 1
CLSI 0.5 0.5 1
CBS 221.76 F. fujikuroi Etest 2 0.5 0.25
EUCAST 1 0.5 0.5
CLSI 0.5 2 1
CBS 132894 F. incarnatum Etest 1 4 ⬎ 32
EUCAST 0.5 4 16
CLSI 1 4 ⬎ 16
CBS 135806 F. keratoplasticum Etest 16 0.25 4
EUCAST 8 1 8
CLSI 4 2 8
CBS 138750 F. lichenicola Etest 1 2 ⬎ 32
EUCAST 0.5 4 16
CLSI 0.5 2 ⬎ 16
CBS 135140 F. napiforme Etest ⬎ 16 0.5 ⬎ 32
EUCAST 8 4 ⬎ 16
CLSI 4 2 8
CBS 137206 F. oxysporum Etest 2 4 ⬎ 32
EUCAST 2 2 16
CLSI 1 2 ⬎ 16
CBS 135955 F. petroliphilum Etest 0.5 4 ⬎ 32
EUCAST 0.5 8 16
CLSI 1 4 ⬎ 16
CBS 133030 F. proliferatum Etest 2 4 ⬎ 32
EUCAST 1 4 16
CLSI 0.5 4 ⬎ 16
CBS 135145 F. sacchari Etest 1 0.25 1
EUCAST 1 1 1
CLSI 1 0.5 1
CBS 135785 F. solani FSSC5 Etest 2 4 ⬎ 32
EUCAST 2 8 16
CLSI 2 4 ⬎ 16
CBS 135798 F. solani FSSC6 Etest ⬎ 32 ⬎ 32 ⬎ 32
EUCAST 8 16 16
CLSI 4 ⬎ 16 ⬎ 16
CBS 136481 F. subglutinans Etest 2 1 0.5
EUCAST 1 1 1
CLSI 0.5 1 0.25
CBS 135540 F. temperatum Etest 2 2 4
EUCAST 1 1 2
CLSI 0.5 0.5 0.5
CBS 130176 F. thapsinum Etest 4 2 ⬎ 32
EUCAST 4 2 16
CLSI 2 2 ⬎ 16
CBS 579.78 F. verticillioides Etest 1 2 1
EUCAST 1 1 1
CLSI 2 1 0.25
All All
bEtest 2 (0.25 to ⬎ 32), 16 2 (0.25 to ⬎ 32), 4 32 (0.25 to ⬎ 32), 32
EUCAST 1 (0.25 to 8), 8 2 (0.5 to 16), 4 16 (0.5 to ⬎ 16), 16
CLSI 1 (0.5 to 4), 4 2 (0.5 to ⬎ 16), 4 8 (0.25 to ⬎ 16), 16
a
AMB, amphotericin; VRC, voriconazole; POS, posaconazole.
b
Shown are the median (range) MIC
90values for all isolates.
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and 32 g/ml for Etest, 16, 0.5 to ⬎ 16, and 16 g/ml for the EUCAST method, and 8, 0.25 to ⬎ 16, and 16 g/ml for the CLSI method, respectively.
Table 2 shows the analysis of the essential agreement (EA) between 48-h CLSI, EUCAST, and Etest MICs for each drug tested. The levels of agreement (within ⫾ 2 dilutions) between the results of the CLSI and the EUCAST method were 100% for amphotericin B, voriconazole, and posaconazole. The levels of agreement (within ⫾ 2 dilutions) between the results of the EUCAST method and the Etest were 100% for posaconazole and 95% for both amphotericin B and voriconazole. The agreement between the CLSI and the Etest was 90% for amphotericin B, 95% for voriconazole, and 85% for posaconazole. Amphotericin B and posaconazole MICs with the Etest tended to be significantly higher (P ⫽ 0.007 to 0.097) (median dilution difference, 1 to 1.5) than those of the two reference methods, indicating that Etest MIC distribution is shifted to the right compared to the EUCAST and the CLSI MIC distributions. However, the most of the differences remained within ⫾ 2 dilutions. The comparison of MICs obtained with the three methods resulted in a considerable Pearson correlation coefficient (PCC) ranging from 0.71 to 0.97. The correlation among Etest versus CLSI and Etest versus EUCAST methodologies to posaconazole was higher (0.89 and 0.97) than amphotericin B (0.71 and 0.86) and voriconazole (0.77 and 0.76) (Table 2). Moreover, the PCCs were statistically significant (P ⬍ 0.0001), indicating a good correlation between the MICs obtained by the CLSI or EUCAST and the Etest. The categorical agreement (CA) for all three methods and drugs was ⬎ 85%, with slightly higher levels of agreement found between the Etest and the EUCAST (90 to 100%) than the CLSI (85 to 95%).
Our results indicated a good agreement between the three methods. The EA and CA between the Etest and the two reference methods were high for all three drugs ( ⱖ 85%).
The MIC results for amphotericin B spanned a range of 0.25 to 8 g/ml with the CLSI and the EUCAST method and a wider range of 0.25 to ⬎ 32 with the Etest. Wide MIC ranges were also found with posaconazole and voriconazole and all three methodologies, indicating considerable interspecies variations. High MICs ( ⬎ 4 g/ml) were found for amphotericin B with F. keratoplasticum, F. napiforme, and FSSC6 for voriconazole with F. petrophilum and FSSC6 and for posaconazole with most species except F. acutatum, F. delphinoides, F.
equiseti, F. fujikuroi, F. sacchari, F. subglutinans, F. temperatum, and F. verticillioides. Our results were comparable to those of other studies using BMD testing (1, 2, 11–16).
Posaconazole displayed high MIC results, with values ranging from 0.25 to over 32 g/ml against Fusarium species, with little difference when BMD and Etest methods were com- pared, which is in agreement with previously reported data (2, 17).
Although posaconazole showed high MICs for most isolates in the present study, case reports have demonstrated successful treatment of fusariosis with this drug. In one case report, F. solani did not respond to treatment with natamycin and amphotericin B but responded to posaconazole with a MIC of 1 g/ml, and the patient recovered completely (18). Tu et al. (19) describes 3 cases of keratitis due to F. solani successfully
TABLE 2 Comparison among the three methods for antifungal susceptibility testing of Fusarium spp.
Method
comparison Drug
Median (range) difference
Agreement (%)
aPaired t test
P value Pearson r
bCategorical agreement (%) ⴞ 1 dil. ⴞ 2 dil.
CLSI vs EUCAST AMB ⫺ 1 ( ⫺ 1 to 1) 100 100 0.234 0.78 85
VOR 0 (⫺1 to 2) 95 100 1.000 0.81 90
POS 1 ( ⫺ 2 to 2) 75 100 0.383 0.89 100
EUCAST vs Etest AMB ⫺1 (⫺3 to 2) 80 95 0.007 0.86 100
VOR 0 ( ⫺ 2 to 3) 75 95 0.494 0.76 95
POS ⫺ 1.5 ( ⫺ 2 to 2) 45 100 0.013 0.97 90
CLSI vs Etest AMB ⫺ 1 ( ⫺ 4 to 1) 60 90 0.008 0.71 85
VOR 0 ( ⫺ 2 to 3) 80 95 0.479 0.77 95
POS ⫺ 1 ( ⫺ 3 to 3) 70 85 0.097 0.89 90
a
dil., dilution.
b