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Examples Definitions, Poisson Summary statistics Modelling and inference

Introduction to spatial point processes

Jean-Fran¸ cois Coeurjolly

http://www-ljk.imag.fr/membres/Jean-Francois.Coeurjolly/

Laboratoire Jean Kuntzmann (LJK), Grenoble University

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Preliminary

Files which can de downloaded

http://www-ljk.imag.fr/membres/Jean-Francois.Coeurjolly/documents/Lille/

or more simply on the workshop webpage, program page http://math.univ-lille1.fr/ heinrich/geostoch2014/

introductionSPP cours.pdf : pdf file of the slides. Beamer version.

introductionSPP print.pdf : pdf file of the printed version.

ShortRcode used to illustrate the talks.

The code is using theexcellentRpackagespatstatwhich can be downloaded from the R CRAN website.

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Examples Definitions, Poisson Summary statistics Modelling and inference

1 Examples

2 Definitions, Poisson

3 Summary statistics

4 Modelling and inference

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Spatial data . . .

. . . can be roughly and mainly classified into three categories :

1

Geostatistical data.

2

Lattice data.

3

Spatial point pattern

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Examples Definitions, Poisson Summary statistics Modelling and inference

Geostatistical data

sic.100 dataset (R package

geoR)

Cumulative rainfall in Switzerlan the 8th May.

The observation consists in the

discretization

of a random field,

X =(Xu,u ∈R2)

50 100 150 200 250 300

050100150200250

X Coord

Y Coord

● ●

●●

● ●

0 100 200 300 400 500 600

050100150200250

data

Y Coord

●●●●

●●

50 100 150 200 250 300

0100200300400500600

X Coord

data

data

Density

0 100 200 300 400 500 600

0.0000.0010.0020.0030.004

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Lattice data (1)

Eire dataset (R package

spdep)

% of people with group A in eire, observed in 26 regions.

The data are aggregated on the region

random field on a network.

Percentage with blood group A in Eire

under 27.91 27.91 − 29.26 29.26 − 31.02 over 31.02

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Examples Definitions, Poisson Summary statistics Modelling and inference

Lattice data (2)

Lennon dataset (R package

fields)

Real-valued random field (gray scale image with values in

[0,

1]).

Defined on the network

{1, . . . ,

256}

2

.

0.0 0.2 0.4 0.6 0.8 1.0

0.00.20.40.60.81.0

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Spatial point pattern (1)

Japanesepines dataset (R package

spatstat)

Locations of 65 trees on a bounded domain.

S =R2

(equipped with

k · k).

japanesepines

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Examples Definitions, Poisson Summary statistics Modelling and inference

Spatial point pattern (2)

Longleaf dataset (R package

spatstat)

Locations of 584 trees observed with their diameter at breast height.

S=R2×R+

(equipped with max(k · k,

| · |)).

longleaf

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Spatial point pattern (3)

Ants dataset (R package

spatstat)

Locations of 97 ants categorised into two species.

S =R2× {0,

1} (equipped with the metric

max(

k · k,dM)

for any distance

dM

on the mark space).

ants

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Examples Definitions, Poisson Summary statistics Modelling and inference

Spatial point pattern (3)

chorley dataset (R package

spatstat)

Cases of larynx and lung cancers and position of an industrial incinerator.

S =R2× {0,

1} (equipped with the metric

max(

k · k,dM)

for any distance

dM

on the mark space).

Chorley−Ribble Data

●●

Références

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