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Table S2. Identificaton of consensus sequence of TaREM using MEME and their function by prosite and Eukaryotic Linear Motif resource programs.

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Table S2. Identificaton of consensus sequence of TaREM using MEME and their function by prosite and Eukaryotic Linear Motif resource programs. The motif numbers are the same to those described in Figure5.

TaREM group/ genes names Motif Number Motif E-value

Motif size (aa) Best possible match Predicted Motif Function

All genes †1 2.8e-34 105 Remorin-C domain -

Group1/

1.1, 1.2, 1.3, 1.4, 1.5

*2 1.1e-07 36-65 Remorin-N domain -

Group1/

1.1, 1.2, 1.3, 1.4

3 3e-05 23 KITGGSIADERDAVALAKRV

ETS

Casein kinase II (CK-2) phosphorylation site (PA)

Group 1/ 1.2, 1.3, 1.4, 1.5

4 4.545e-03 14 DDSKALIAVVIVEV (LIG_SUMO_SIM_par_1)

Motif for the parallel beta augmentation mode of non-covalent binding to SUMO protein.

Group 1 / 1.2, 1.3, 1.4, 1.5

5 3e-05- 4e-06 13 KDVIAEEKAVIVP GTF2I-like repeat profile

Group 1 / 1.1, 1.2, 1.5 6 0.16-0.084 10 MGAEVEEAAK No hit Group 1 / 1.5 7 5.324e-03 29 KEKKSEGGSILDRDAVIAVL ARDLVEATK CK2_PHOSPHO_SITE Casein kinase II phosphorylation site Group 1 / 1.5 8 1.280e-02 25 KVAPDEDESKALAVVTVEP KPNTKP (MOD_SUMO_rev_2) Inverted version of Sumoylation motif

recognized for modification by SUMO-1

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1.3, 1.5, 6.6 function in the abrogation of caspase inhibition by

Inhibitor of Apoptosis Proteins (IAPs) in apoptotic cells.

Group 1/ 1.2, 1.3, 1.4

10 1.280e-02 16 KVDVADEEKAVIVAIP (MOD_SUMO_rev_2)

Inverted version of Sumoylation motif

recognized for modification by SUMO-1 Group 4/ 4.1, 4.2, 4.3 11 6.4e-07 27 TMPTMISREFNTSAMLVAIA GASASTM ASN_GLYCOSYLATION N-glycosylation site Group 4/ 4.1, 4.2 12 8.662e-03 24 GDEDELEEETNPLAIVPDSH NYPI (LIG_FHA_1) Phosphothreonine motif binding a subset of FHA domains,

(LIG_PDZ_Class_2) The C-terminal class 2 PDZ-binding motif

Group 4/ 4.2

13 2.302e-04 13 FVRDEIHAPLTSPP BIG1 Big-1 (bacterial Ig-like

domain 1) domain profile Group 5/ (5.1, 5.3) 14 3e-7 25 VMDDERQVTVLTRWSKKR HVTARLG PKC_PHOSPHO_SITE Protein kinase C phosphorylation site Group 6/ 6.1, 6.2, 6.3, 6.4, 6.5, 6.6 15 3e-2 23 VSMRDMVGTEMTPIAGSQK EPS Collagen IV carboxyl-terminal non-collagenous (NC1) domain profile Group 6/ 6.1, 6.2, 6.3, 6.4, 16 4e-12 25 FSRKPAPSKWDDAEQKWILS ASPTG LDL-receptor class B

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6.5, 6.6 low-density lipoprotein receptor) Group 6/ 6.1, 6.2, 6.3, 6.6 17 3e-10 24 TRREIMADLGTQRLGKMTN TIAAW PKC_Protein kinase C phosphorylation site, CK2_PHOSPHO_SITE Casein kinase II phosphorylation site Group 6/ 6.1, 6.2, 6.3, 6.6

18 5.200e-03 12 MEDYERIHKPVQ (LIG_LIR_Gen_1) Canonical

LIR motif that binds to Atg8 protein family members to mediate processes involved in autophag Group 0.1/ 0.1, 0.12 19 1.7e-12 57 DAVNEWRLPKVSEEADEAV DQKDWQDDAMSSRVSSAR DWNFESDSAYEGSNHDGRA F PKC_Protein kinase C phosphorylation site, CK2_PHOSPHO_SITE Casein kinase II phosphorylation site Group 0.2/ 0.2, 0.23 20 1.7e-095 54 GDLTPGQNVVGKVVDSVPN LKDDPSFTRKTPDKKRSRNF EQEEANQRAKPGVNPTTS PKC_PHOSPHO_SITE Protein kinase C phosphorylation site †

Figure

Table S2. Identificaton of consensus sequence of TaREM using MEME and their function by prosite and Eukaryotic Linear Motif resource programs

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