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Relatedness of human, animal and food Clostridium difficile strains

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Academic year: 2021

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The   main   objec-ve   of   this   study   was   to   characterize   and   compare  animal  and  human  C.  difficile  strains  with  respect   to   the   PCR-­‐ribotype   and   the   an-bio-c   resistance.   Mul-locus  sequence  typing  (MLST)  was  performed  in  order   to  study  clonal  rela-onships  of  the  isolates.  

 

Clostridium   difficile   is   an   important   cause   of   infec-ous   diarrhea   in   hospitals.   The   major   risk   factors   for   the   development   of   nosocomial   C.   difficile   infec-on   include   an-bio-c   therapy   and   increasing   age.   In   animals,   C.   difficile   also   seems   to   be   an   important  cause  of  enteric  disease.  Recent  isola-on  of  C.  difficile  in  a  variety  of  meat   products  reinforces  the  hypothesis  about  a  poten-al  risk  of  foodborne  transmission.  

 

Relatedness  of  human,  animal  and  food  Clostridium  difficile  strains  

     Rodriguez  C1,  Taminiau1  B,,  Avesani  V2,  Van  Broeck  J2,  Delmée  M2  and  Daube  G1    

1. University of Liège, Faculty of Veterinary Medicine, Food Science Department - Food Microbiology, Liège, Belgium 2. Catholic  University  of  Louvain,  Faculty  of  Medecine,  Microbiology  Unit,  Brussels,  Belgium  

INTRODUCTION

OBJECTIVES

MATERIAL AND METHODS

RESULTS

The  mul--­‐locus  sequence  typing  analysis  showed  that  animal  and  carcass  C.  difficile  isolates  largely  overlap  with  human  PCR-­‐ribotypes.  Furthermore,   strains  that  are  prevalent  in  humans  are  also  present  in  different  animals  and  in  carcasses  at  slaughter,  sugges-ng  a  poten-al  risk  of  foodborne   infec-ons  linked  to  C.  difficile.  The  overlap  between  strains  from  animal  and  human  host  suggest  a  poten-al  risk  of  interspecies  transmission.    

 

CONCLUSIONS

Samples

Methods

Twenty   different   PCR   ribotypes   were   iden-fied,  including  PCR-­‐ribotype  078,  014  and   015.  Only  7  PCR-­‐ribotypes  were  nega-ve  for  all   toxin   genes:   UCL270   (n=1),   UCL103   (n=1),   UCL36  (n=2),  UCL9  (n=2)  and  UCL  261  (n=1).      

Only  PCR-­‐ribotypes  078,  023,  UCL5a  and  UCL11   presented  all  the  types  of  toxin  genes  while  all   of   the   other   types   were   posi-ve   for   both   of   toxin   genes   tcdA   and   tcdB,   but   nega-ve   for   cdtA  gene  encoding  for  the  binary  toxin.  A  39   bp  dele-on  in  the  regulator  gene  tcdC,  which  is   associated   with   an   increased   produc-on   of   toxins  in  hyper-­‐virulent  C.  difficile  strains,  was   found  in  all  PCR-­‐ribotypes  078,  023,  UCL5a  and   UCL11.    

 

Most  of  these  PCR-­‐ribotypes  had  a  muta-on  in   the   GyrA   gene.   This   muta-on   is   related   with   moxifloxacin   resistance.   Phylogene-c   analysis   showed   that   human   and   animal   isolates   with   the   same   PCR-­‐ribotype   cluster   in   the   same   lineage.  

 

18-­‐19  September  2014  –  Brussels,  Belgium   19  th  Conference  on  Food  Microbiology    

Human   C.   difficile   isolates   were   obtained   from   hospitalized   pa-ents.   Animal   isolates   were   collected   from   horses,   pigs   and   ca_le  stools  and  from  carcasses  of  pigs  and  ca_le  at  slaughter.          

Isolates   were   tested   for   suscep-bili-es   to   a   total   of   7   an-microbial   agents   (rifampin,  tetracycline,  erythromycin,  clindamycin,  vancomycin,  metronidazole  and   moxifloxacin)  by  disc  diffusion  (n=4)  and  E-­‐test  (n=3)  respec-vely.    

C. difficile typing

Isolates  were  characterized  by  PCR  ribotyping  and   tested   for   the   presence   of   toxin   genes   encoding   the  3  toxins  (tcdA,  tcdB  and  cdtA)  using  Genotype   Cdiff   Test   System.   This   test   made   possible   the   detec-on  of  dele-ons  in  the  regulator  gene  tcdC     (39bp  dele-on)  and  gyrA  gen  muta-on  associated   with  moxifloxacin  resistance.  

MLST analysis

Seven  housekeeping  loci  were   t o   d e t e r m i n e   g e n e - c   relatedness   of   the   isolates.   For   PCR-­‐ribotype   014   and   078,   the   band   pa_erns   of   animal   and   human   strains   were  compared.  

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