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[PDF] Top 20 The use of RNA probes for the analysis of gene expression

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The use of RNA probes for the analysis of gene expression

The use of RNA probes for the analysis of gene expression

... For the synthesis of large quantities of RNA (>10 RNA transcripts/DNA template mol- ecule), each ribonucleotide is added at a final concentration of 0.5-1 mM; trace [r] ... Voir le document complet

11

GenomicScape: An Easy-to-Use Web Tool for Gene Expression Data Analysis. Application to Investigate the Molecular Events in the Differentiation of B Cells into Plasma Cells

GenomicScape: An Easy-to-Use Web Tool for Gene Expression Data Analysis. Application to Investigate the Molecular Events in the Differentiation of B Cells into Plasma Cells

... Overview of GenomicScape GenomicScape ( ...available gene expression data, and to explore the landscape of gene annotation re- sources for genes of ...interest. ... Voir le document complet

11

Optimal Sample Size for Multiple Testing: The Case of Gene Expression Microarrays

Optimal Sample Size for Multiple Testing: The Case of Gene Expression Microarrays

... consider the choice of an optimal sample size for multiple comparison ...problems. The motivating application is the choice of the number of microarray experiments ... Voir le document complet

32

Optimization of an RNA-Seq Differential Gene Expression Analysis Depending on Biological Replicate Number and Library Size

Optimization of an RNA-Seq Differential Gene Expression Analysis Depending on Biological Replicate Number and Library Size

... published, RNA-Seq technology has been widely perceived as a revolutionary tool for transcriptomics ( Wang ...quantification of gene expression and, in particular, it is the ... Voir le document complet

19

Cloning and RNA interference analysis of the salivary protein C002 gene in Schizaphis graminum

Cloning and RNA interference analysis of the salivary protein C002 gene in Schizaphis graminum

... used for C002 gene cloning were designed using an online degenerate primer design software CODE- HOP ...on the amino acid sequences of C002 from five species of aphids including Aphis ... Voir le document complet

8

Gene co-expression analysis unravels a link between C9orf72 and RNA metabolism in myeloid cells

Gene co-expression analysis unravels a link between C9orf72 and RNA metabolism in myeloid cells

... archive for the deposit and dissemination of sci- entific research documents, whether they are pub- lished or ...not. The documents may come from teaching and research institutions in France ... Voir le document complet

3

Semi-supervised consensus clustering for gene expression data analysis

Semi-supervised consensus clustering for gene expression data analysis

... Also the descrip- tion of a certain gene function is based on current knowledge in the domain ...change. For example, current knowledge of cer- tain existing gene is ... Voir le document complet

14

RNA-seq analysis of hepatic gene expression of common Pekin, Muscovy, mule and hinny ducks fed ad libitum or overfed

RNA-seq analysis of hepatic gene expression of common Pekin, Muscovy, mule and hinny ducks fed ad libitum or overfed

... in gene expression between these two hybrids as fatty liver production is conducted in Mule ducks and not in Hinny ...fact the reason is more related to the difficulty to produce Hinny ducks ... Voir le document complet

15

The Gene Expression Analysis of Blood Reveals S100A11 and AQP9 as Potential Biomarkers of Infective Endocarditis

The Gene Expression Analysis of Blood Reveals S100A11 and AQP9 as Potential Biomarkers of Infective Endocarditis

... suspicion of IE, i.e. in the setting of the clinical ...dosage of S100A11 is appropriate for the definite diagnosis of IE whatever the ...to use ... Voir le document complet

10

Analysis of partial sequences of the RNA-dependent RNA polymerase gene as a tool for genus and subgenus classification of coronaviruses

Analysis of partial sequences of the RNA-dependent RNA polymerase gene as a tool for genus and subgenus classification of coronaviruses

... classification of all organisms under- goes constant drift as new discoveries are made that inform their evolutionary histories, and as methods for studying evolutionary histories change and improve [21, ... Voir le document complet

10

Granulomatous response to Coxiella burnetii, the agent of Q fever: the lessons from gene expression analysis

Granulomatous response to Coxiella burnetii, the agent of Q fever: the lessons from gene expression analysis

... POLARIZATION OF GRANULOMA CELLS The macrophages are known to be polarized into M1 or M2 cells, which is associated with microbicidal response or per- missive response for intracellular bacteria ... Voir le document complet

9

Regulation of gene expression in the dinoflagellate Lingulodinium polyedrum

Regulation of gene expression in the dinoflagellate Lingulodinium polyedrum

... replace the classical RNAi pathway [361]. Surprizingly, ciliates and the heterokont Phytophthera, belonging to the same kingdom as apicomplexans and dinoflagellates, contain all the three ... Voir le document complet

332

Comparison of normalization methods for differential gene expression analysis in RNA-Seq experiments: A matter of relative size of studied transcriptomes

Comparison of normalization methods for differential gene expression analysis in RNA-Seq experiments: A matter of relative size of studied transcriptomes

... test the performance of nor- malization methods on different data sets, we performed 4 simulation types by varying underlined parameters in Step I of the above ...Some of these ... Voir le document complet

10

Use of fluorescent probes in supporting functional group analysis resulting from polymer ageing

Use of fluorescent probes in supporting functional group analysis resulting from polymer ageing

... on the determination of the solvatochromic parameters of a series of polymers with various functional groups containing oxygen atoms, a method was proposed which allowed for ... Voir le document complet

30

Spectral analysis of gene expression profiles using gene networks

Spectral analysis of gene expression profiles using gene networks

... point of view, very little can be learned from the classifier obtained in the original Euclidian space (figure 4, left), it is indeed possible to distinguish several features of interest ... Voir le document complet

14

Sequence analysis of the ARG7 gene of Schizosaccharomyces pombe coding for argininosuccinate lyase. Expression of the gene in Saccharomyces cerevisiae.

Sequence analysis of the ARG7 gene of Schizosaccharomyces pombe coding for argininosuccinate lyase. Expression of the gene in Saccharomyces cerevisiae.

... The transcription initiation sites have been determined by primer extension using as a primer a 19 b oligonucle-... Northern blots of RNA prepared from S.[r] ... Voir le document complet

6

Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato

Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato

... more of these domains are also included in the family (Reed ...to the so-called EAR (ethylene-responsive element-binding factor-associated amphiphilic repression) domain (Tiwari et ...required ... Voir le document complet

15

Evaluation and Optimization of Clustering in Gene Expression Data Analysis

Evaluation and Optimization of Clustering in Gene Expression Data Analysis

... patterns of expression). There are many publications related to the optimal number of clusters, the optimal clustering algorithm or the optimal similarity/dissimilarity measure ... Voir le document complet

12

Insights into the regulation of small RNA expression: SarA represses the expression of two sRNAs in Staphylococcus aureus

Insights into the regulation of small RNA expression: SarA represses the expression of two sRNAs in Staphylococcus aureus

... their expression should be repressed during bac- terial ...sRNA gene expres- sion could, upon TF release from the sRNA promoters, allow transient expression of ...enable the ... Voir le document complet

16

Effects of deletion of the prolactin receptor on ovarian gene expression.

Effects of deletion of the prolactin receptor on ovarian gene expression.

... regulator of reproduction and cell growth. Null mutation of the PRL receptor (R) gene leads to female sterility due to a complete failure of embryo ...in the mouse appear to be ... Voir le document complet

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