[PDF] Top 20 Predicting gene essentiality from expression patterns in Escherichia coli
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Predicting gene essentiality from expression patterns in Escherichia coli
... ity. In the case of pathogen organisms, the identification of these genes is of considerable interest, as they provide targets for the development of novel ...proteins in the protein-protein interaction ... Voir le document complet
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Cell-free spent media obtained from Bifidobacterium bifidum and Bifidobacterium crudilactis grown in media supplemented with 3’-sialyllactose modulate virulence gene expression in Escherichia coli O157:H7 and Salmonella Typhimurium
... properties. In addition, B. infantis or B. bifidum can grow in the presence of these carbohydrates (Sela, 2011; Milani et ...grown in medium supplemented with dairy ingredients such as whey, ... Voir le document complet
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The nAG sensor nagC regulates LEE gene expression and contributes to gut colonization by escherichia coli O157:H7
... fitness in vivo through the modulation of NagC ...concentrations in the cecal content of uninfected mice but not in the cecal content of infected mice (Figure ...decreased in supplemented mice ... Voir le document complet
11
Erratum for Wallenstein et al., “ClbR Is the Key Transcriptional Activator of Colibactin Gene Expression in Escherichia coli”
... clbA gene expression has been reported for iron via the ferric uptake regulator (Fur) protein and the RyhB small regulatory RNA (35, ...that expression of the main transcriptional activator of the ... Voir le document complet
26
Diagnostic strategy for identifying avian pathogenic Escherichia coli based on four patterns of virulence genes
... involved in sugar metabolism (48). A link between the expression of this locus and ...E. coli pathogenic abilities was confirmed by experiments showing its role in promoting bacterial fitness ... Voir le document complet
7
Chromosomal patterns of gene expression from microarray data: methodology, validation and clinical relevance in gliomas.
... variations in expres- sion of spatially related gene and visualise them on chro- ...pervasive in many fields including analysis of gene sequences and functional genomics data ...variation ... Voir le document complet
18
Cloning, expression and purification of the general stress protein Yhbo from Escherichia coli.
... Sequence, expression in Escherichia coli, and analysis of the gene encoding a novel intracellular protease (PfpI) from the hyperthermophilic archaeon Pyrococcus ...the ... Voir le document complet
18
Cofactor binding modulates the conformational stabilities and unfolding patterns of NAD(+)-dependent DNA ligases from Escherichia coli and Thermus scotoductus
... found in every bacterial species ...zymes from Bacillus stearothermophilus (N-terminal domain) (5) and Thermus filiformis (3) have been determined by x-ray ...susceptibility gene product BRCA1) (do- ... Voir le document complet
9
The search for the gene mutations underlying enterotoxigenic Escherichia coli F4ab/ac susceptibility in pigs: A review
... enterotoxigenic Escherichia coli with fimbriae F4 (ETEC-F4) is an important problem in neonatal and just weaned piglets and hence for the pig farming ...suffer from diarrhoea after an ETEC-F4 ... Voir le document complet
8
Adherent-invasive Escherichia coli isolated from Crohn's disease patients induce granulomas in vitro
... identified in the NOD2-encoding gene in patients with CD, indicating a link between the innate immune response to invasive bacteria and the development of CD (Hugot et ...role in the formation ... Voir le document complet
10
ClbR Is the Key Transcriptional Activator of Colibactin Gene Expression in Escherichia coli
... reporter gene expression during growth ...ClbR expression is directly altered by the availability of iron ...generated from the clbR upstream region were observed with probes 13, 14, and 15 ... Voir le document complet
26
Global impact of mature biofilm lifestyle on Escherichia coli K-12 gene expression.
... involvement in mature biofilm formation of 30% (20 genes) of the most highly ...E. coli biofilm: flow chamber ...E. coli TG1 and selected TG1 deletion mutants expressing ...grown in flow ... Voir le document complet
16
Distinctive Gene Expression Patterns Define Endodormancy to Ecodormancy Transition in Apricot and Peach
... differs from other species such as pear, which have a true resting state at endodormancy ( Saito et ...filed expression for a subset of genes during bud dormancy in peach (Prunus persica) using ... Voir le document complet
25
Discovering Novelty in Gene Data : From Sequential Patterns to Visualization
... evaluated in controlled con- ditions and the user’s perception of the different functionalities to be recorded; 2) Questionnaires are used to complement experimental ...involved in handling the ... Voir le document complet
11
The synergistic triad between microcin, colibactin, and salmochelin gene clusters in uropathogenic<em> Escherichia coli</em>
... papG in the pyelonephritis than in the cystitis group [ 3 , 14 , 18 ...]. In a mouse model, this allele was shown to promote the early establishment of ...E. coli in the kidney [ 21 ... Voir le document complet
5
Verotoxigenic Escherichia coli from animals, humans and foods: who's who?
... isolated from healthy cattle, young and adult animals, and diseased humans, favouring the hypothesis of animals as sources of contamination for ...specificity in pathology and in carriage, if any, ... Voir le document complet
15
Aminoacylated tmRNA from Escherichia coli interacts with prokaryotic elongation factor Tu.
... dissolved in 50 mM Tris-HCl , pH 7 + 5 , 50 mM KCl , and 10 mM MgCl 2 and incubated with a 5- and 10-fold excess of EF-Tu- GTP in a final volume of 100 m L + Controls were carried out in parallel ... Voir le document complet
5
Biosynthesis of soluble carotenoid holoproteins in Escherichia coli.
... The possibility of isolate holo-OCPs from E.coli cells constitutes a major advance for the investigation of the molecular mechanism of OCP since it facilitates rapid isolation of mutant proteins with new ... Voir le document complet
9
Crystal structure of penicillin-binding protein 3 (PBP3) from Escherichia coli
... resulted in only some very small badly diffracting crystals and one crystal diffracting at ...manuscript. In the case of several PBPs structures, the difficulties encountered in obtaining high ... Voir le document complet
80
Characterization of mucosa-associated Escherichia coli strains isolated from Crohn’s disease patients in Brazil
... E. coli, thereby contributing to susceptibility to the ...E. coli is an important microorganism of the normal intestinal ...E. coli strains associated with the mucosa of CD patients possess unusual ... Voir le document complet
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