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[PDF] Top 20 de novo structure prediction methods for transmembrane proteins and their application to the divisome

Has 10000 "de novo structure prediction methods for transmembrane proteins and their application to the divisome" found on our website. Below are the top 20 most common "de novo structure prediction methods for transmembrane proteins and their application to the divisome".

de novo structure prediction methods for transmembrane proteins and their application to the divisome

de novo structure prediction methods for transmembrane proteins and their application to the divisome

... needed and TMs are restrained in the membrane boundaries Scores are computed from a FF that uses a CG representation of the side chains ...generated and clusters are ... Voir le document complet

35

Influence of assignment on the prediction of transmembrane helices in protein structures.

Influence of assignment on the prediction of transmembrane helices in protein structures.

... succeeded to determine that an amphipathic -helix and a hydrophobic -helix were found approximately ...shows the superimposition of the 20 different structural models using PyMol software ... Voir le document complet

37

Structure predictions of membrane domains of proteins from the Divisome and BlaR

Structure predictions of membrane domains of proteins from the Divisome and BlaR

... des Proteins, Institut de Chimie B6a, University of Liège, Sart-Tilman, 4000 Liège, Belgium Abstract Except for MraY, for which a structure has been resolved in 2013, structures of the ... Voir le document complet

1

Structure prediction of GPCRs using piecewise homologs and application to the human CCR5 chemokine receptor: validation through agonist and
antagonist docking

Structure prediction of GPCRs using piecewise homologs and application to the human CCR5 chemokine receptor: validation through agonist and antagonist docking

... 8 prediction of CXCR4 and CCR5 model structures along with their ...simulations and molecular docking on both the crystal and model structures of CXCR4 to validate our ... Voir le document complet

49

Modeling and predicting super-secondary structures of transmembrane beta-barrel proteins

Modeling and predicting super-secondary structures of transmembrane beta-barrel proteins

... Conclusion and perspectives Conclusion We have presented, in this thesis, a new pseudo-energy minimization method for the clas- sification and prediction of transmembrane protein ... Voir le document complet

120

NMR methods for intrinsically disordered proteins : application to studies of NS5A protein of hepatitis C virus

NMR methods for intrinsically disordered proteins : application to studies of NS5A protein of hepatitis C virus

... tool for structural biology The phenomenon of nuclear magnetic resonance was discovered by Purcell et ...[41] and Bloch et ...awarded the Nobel Prize in Physics ”for their ... Voir le document complet

259

The potential bio based polymer and their nanocomposites for composites structure

The potential bio based polymer and their nanocomposites for composites structure

... Archives des publications du CNRC This publication could be one of several versions: author’s original, accepted manuscript or the publisher’s version. / La version de cette publication peut être l’une des ... Voir le document complet

7

Statistical Methods for Neural Network Prediction Models

Statistical Methods for Neural Network Prediction Models

... Statistical methods are widely used in multivariate data analysis or in curve fitting problems for regression ...models. The nonlinear nature of neural networks and the different ... Voir le document complet

55

Structure prediction of P1-type ATPases and molecular dynamics simulations on their Metal Binding Domains

Structure prediction of P1-type ATPases and molecular dynamics simulations on their Metal Binding Domains

... oupled to energy sour es like pre-existing ion gradients or A TP hydrolysis, thus allowing substrates to be moved uphill against their on entration gradients, as in nutrient and ion a ... Voir le document complet

169

Data mining for structure type prediction

Data mining for structure type prediction

... structure types. It was determined if an alloy system was compound forming with 13.. calculations using DMQC, compared to 98 calculations required with random structure selection. sho[r] ... Voir le document complet

42

Application of the Design Structure Matrix (DSM) to the real estate development process using modular construction methods

Application of the Design Structure Matrix (DSM) to the real estate development process using modular construction methods

... occur to achieve an effective parallel-work process that is followed between the on-site crew and the manufacturer to make sure the construction schedule and process runs ... Voir le document complet

114

Accomplishments: their telos and their structure

Accomplishments: their telos and their structure

... in the rock.’ The contrast between (12a) and (14), and the marginality of (15), are explained away in terms of whether it is possible to add to the implementation ... Voir le document complet

17

Coarse-graining and data mining approaches to the prediction of structures and their dynamics

Coarse-graining and data mining approaches to the prediction of structures and their dynamics

... due to the many orders of magnitude in length and time scales that need to be ...approaches to this problem is the systematic coarse-graining of less relevant degrees of freedom ... Voir le document complet

249

Methods for assessment and prediction of QoE, preference and visual discomfort in multimedia application with focus on S-3DTV

Methods for assessment and prediction of QoE, preference and visual discomfort in multimedia application with focus on S-3DTV

... Firstly, an overview of the state-of-the-art researches on visual discomfort is introduced, then, four of my research works are described: 1 the study on the influence of 3D motion on vi[r] ... Voir le document complet

239

Mechanical modeling and numerical methods for poromechanics : Application to myocardium perfusion

Mechanical modeling and numerical methods for poromechanics : Application to myocardium perfusion

... Mynard and Nithiarasu, 2008 ), un ´ecoulement coronarien simplifi´e est int´egr´e ` a un mod`ele 1D d’´ecoulement art´eriel non lin´eaire avec pression ventriculaire et valve ...Lee and Smith, 2012 ) ... Voir le document complet

141

Chemical and enzymatic tools to study proteins in their native cellular environment

Chemical and enzymatic tools to study proteins in their native cellular environment

... We seek to develop a fluorophore targeting method that combines high labeling specificity with small noninvasive peptide tag, works for intracellular protein labeling i[r] ... Voir le document complet

233

Algorithmic structure for geometric algebra operators and application to quadric surfaces

Algorithmic structure for geometric algebra operators and application to quadric surfaces

... ] for Lua, or the library CLIFFORD [ 2 , 1 ] developed by Rafal Ablamowicz and Bertfried Fauser, based on ...Sangwine and Eckhard Hitzer developed a Mul- tivector Toolbox [ 76 ] for ... Voir le document complet

198

Hydrophobic pulses predict transmembrane helix irregularities and channel transmembrane units.

Hydrophobic pulses predict transmembrane helix irregularities and channel transmembrane units.

... used to detect TMS, but results obtained using G2-HPulses indicate that the structure of the whole TMH, and not only that of the embedded core, depends on ...structures, ... Voir le document complet

11

Method for identification of heme-binding proteins and quantification of their interactions

Method for identification of heme-binding proteins and quantification of their interactions

... reducing the possibility for non-specific ...tertiary structure that might be compromised by exposure to harsh conditions necessary for the conjugation ...order to be ... Voir le document complet

12

New methods for $\ell_2-\ell_0$ minimization and their applications to 2D Single-Molecule Localization Microscopy

New methods for $\ell_2-\ell_0$ minimization and their applications to 2D Single-Molecule Localization Microscopy

... index for a low tolerance compared to the other algorithms, which can be observed in Table ...1. The biconvex constrained algorithm reconstructs better with respect to the ... Voir le document complet

6

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