[PDF] Top 20 Evolutionary tinkering with conserved components of a transcriptional regulatory network
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Evolutionary tinkering with conserved components of a transcriptional regulatory network
... binding of Fhl1 is Rap1 and Hmo1-dependent in ...question of the evolution of the ribosomal regulatory ...properties of these distinct TF assemblies, we interpolated the signal ratios ... Voir le document complet
15
Rearrangements of the transcriptional regulatory networks of metabolic pathways in fungi
... an evolutionary perspective, it makes sense that an adapted nutrient-sensitive switch controlled by a given environmental condition would be reused in all situations where condition-dependent tran- ... Voir le document complet
10
Evolutionary tinkering of the expression of PDF1s suggests their joint effect on zinc tolerance and the response to pathogen attack
... as a pseudo-gene and AhPDF1.7 as having a premature stop ...role of PDF1s in zinc tolerance has also been functionally documented in yeast and plants in studies on the extremophile species ...genes ... Voir le document complet
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Structure of CbpA J-domain bound to the regulatory protein CbpM explains its specificity and suggests evolutionary link between CbpM and transcriptional regulators
... structure of the CbpM- CbpA Jdom complex reveals that nearly all of the CbpA residues expected to participate in DnaK binding are also involved in binding to ...importance of this region in CbpA for ... Voir le document complet
11
Inducing chaos in a gene regulatory network by coupling an oscillating dynamics with a hysteresis-type one.
... aspect of the problem but with a more con- structive approach than the one adopted in it and in [2], that would fit better with the concrete differential models of genetic regulation, ... Voir le document complet
27
Artificial Gene Regulatory Network and Spatial Computation: A Case Study
... Development of a Japanese flag with a radial gra- ...rality of the gene expressions in the regulatory network and spatial parameters of the ...ability of ... Voir le document complet
9
Expression profiling of rainbow trout testis development identifies evolutionary conserved genes involved in spermatogenesis.
... agreement with its microarray expres- sion profile, the staining progressively decreased in Sertoli cells in maturing testes and at the spawning stage (data not ...in a similar way to the microarray ... Voir le document complet
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CregNET: Meta-Analysis of Chlamydomonas reinhardtii Gene Regulatory Network
... GRN of the Saccharomyces cerevisiae has been extensively studied (Kim et ...version of YeastNet(v3) (Kim et ...majority of yeast gene expres- sion profiling data, was ...series with no less ... Voir le document complet
92
Arboretum: Reconstruction and analysis of the evolutionary history of condition-specific transcriptional modules
... Overview of Arboretum The full algorithmic details of Arboretum are given in the Sup- plemental ...is a model-based cluster- ing approach that uses a probabilistic generative model to cluster ... Voir le document complet
14
Assessing different components of diversity across a river network using eDNA
... found a reasonable congruency in local alpha diversity of the two contemporary methods and identified a new dependency of eDNA estimates on discharge ...mates of eDNA and kicknet ... Voir le document complet
13
Post-transcriptional regulatory patterns revealed by protein-RNA interactions
... best of our knowledge, we have generated the largest predicted human RBP–mRNA interaction network to ...depletions of RBp binding as an indication of post-transcriptional ...landscape ... Voir le document complet
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Evolutionary approaches for the reverse-engineering of gene regulatory networks: a study on a biologically realistic dataset.
... Exploring the search space with evolutionary algorithms A comparison of various evolutionary approaches First, we compare the ability of an evolutionary algorithm to recover the true str[r] ... Voir le document complet
15
Anomalous diffusion for a class of systems with two conserved quantities
... derivation of the hydrodynamic limits beyond the shocks for systems of conservation laws of dimension n ≥ 2 is very difficult and is one of the most challenging problems in the field of ... Voir le document complet
43
SSR markers in transcripts of genes linked to post-transcriptional and transcriptional regulatory functions during vegetative and reproductive development of Elaeis guineensis
... preparation of embryogenic suspension cells and RNA extractions for the suppression subtractive hybridiza- tion (SSH) library constructions from the 30-day prolifera- tion cycle and after 16 days of liquid ... Voir le document complet
13
Conserved cis-regulatory modules in promoters of genes encoding wheat high-molecular-weight glutenin subunits
... strands of the 1-kb region upstream of the start codon for the six HMW-GS genes from ...sequences of the five ...Renan) of the INRA worldwide hexaploid wheat core collection were anno- tated ... Voir le document complet
18
A Seamless Extension of Components with Aspects using Protocols
... context of Object-Oriented Programming (OOP), has shown that classes are not enough to properly modularize all the concerns of an ...use of classes alone leads to so-called crosscutting concerns, ... Voir le document complet
8
STYLOSA and FISTULATA: regulatory components of the homeotic control of Antirrhinum floral organogenesis.
... development of the ...types of sty flowers, thin or broad style-like structures with stigmatic papillae are visible inside the fourth whorl ...origin of these structures is not clear, but it ... Voir le document complet
14
OSD1 promotes meiotic progression via APC/C inhibition and forms a regulatory network with TDM and CYCA1;2/TAM
... function of CYCA1;2/TAM? CDKA;1 appears to be a major cyclin-dependent kinase that drives meiotic progression in plants ...choice of the partner of homologous recombination ...be a good ... Voir le document complet
15
MicroRNA regulatory patterns on the human metabolic network
... metabolic network. INTRODUCTION According to the central dogma of molecular biology, RNAs are passive messengers and only take charge of trans- ferring genetic ...paring with the cis-elements ... Voir le document complet
9
Gene Regulatory Network Evolution Through Augmenting Topologies
... have a long standing history in evolutionary computation. One of the first GP studies was on what has come to be called the “lawn- mower” problem ...instance of the CCP in a uniform ... Voir le document complet
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