[PDF] Top 20 Digital transcriptome profiling from attomole-level RNA samples
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Digital transcriptome profiling from attomole-level RNA samples
... by profiling the well-studied ...for attomole level RNA applications, and offers researchers the opportunity to obtain reliable transcriptome profiles from extremely small ... Voir le document complet
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Transcriptome profiling of sorted endoreduplicated nuclei from tomato fruits: how the global shift in expression ascribed to DNA ploidy influences RNA-Seq data normalization and interpretation
... ranging from insects to mammals and plants display variations in nuclear ploidy levels resulting from somatic ...a RNA-Seq approach using total nuclear RNA extracted from purified ... Voir le document complet
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Transcriptome profiling of mouse samples using nanopore sequencing of cDNA and RNA molecules
... that RNA molecules had to be reverse transcribed before ...importantly RNA molecules. Here we generated a full mouse transcriptome from brain and liver using the Oxford Nanopore ...sequenced ... Voir le document complet
13
Comparative analysis of RNA sequencing methods for degraded or low-input samples
... the transcriptome index (see above), we removed all reads containing more than 40 consecutive A ...derived from the 3′ end of transcripts, once trimmed of their adapters, were only 21 bases ...bases ... Voir le document complet
21
Estimating sodium intake from spot urine samples at population level: a validation and application study in French adults
... Urine samples were processed less than 12 h after the end of the collec- tion: they were weighed, carefully mixed and aliquoted into 1 ml samples and stored at ...urine samples were ana- lysed in the ... Voir le document complet
10
Transcriptome Analysis in Cotton Boll Weevil (Anthonomus grandis) and RNA Interference in Insect Pests
... dsRNA-microinjected females developed normally, while larvae from AntgCHS1 dsRNA-treated females failed to develop and died (Figure 8A). This can be explained by the observed head capsule and mandibule ... Voir le document complet
16
HR-$\mu$MAS NMR localized metabolic profiling of $\mu$g samples: a model study
... Covadonga.lucas-torres-perez@cea.fr; b JEOL RESONANCE Inc., 3-1-2 Musashino, Akishima, Tokyo 196-8558, Japan NMR has already proven to be a tremendous spectroscopic tool in metabonomics. However, due to its low detection ... Voir le document complet
2
Regularised digital-level corrections for infrared image correlation
... Global digital image correlation (DIC) applied to infrared images is considered for a test where very significant and localized laser heating is ...gradients, digital levels are to be corrected in addition ... Voir le document complet
29
Circular RNA profiling distinguishes medulloblastoma groups and shows aberrant RMST overexpression in WNT medulloblastoma
... grants from the Deutsche Forschungsgemeinschaft (RE 2857/2-1 ...Non-coding RNA in cancerology: fundamental to transla- tional (18CN039-00)”, CNRS/INSERM and Institut Curie ... Voir le document complet
5
Livestock genome annotation: transcriptome and chromatin structure profiling in cattle, goat, chicken and pig
... animals from the four ...particular, from 38% (goat) to 55% (cattle) of the peaks lie at least 5Kb away from any reference gene (Figure ...known from previous studies to be associated with ... Voir le document complet
36
Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea
... evidence from Sanger ESTs and multiple de novo RNA-seq ...extracted from BLASTP hits in TAIR v10, Swissprot and TrEMBL databases (queried in March ... Voir le document complet
19
Identification of signaling pathways targeted by the food contaminant FB1: Transcriptome and kinome analysis of samples from pig liver and intestine
... pathways from the top 10 (highlighted by the KEGG enrichment analysis) that were mostly regulated by FB1 exposure: i) the Toll-like receptor (TLR) signaling pathway (concerning 16 proteins with a false discovery ... Voir le document complet
43
Comprehensive transcriptome profiling of root-knot nematodes during plant infection and characterisation of species specific trait
... isolated from tomatoes in French West Indies was multiplied on resistant tomato ...collected from tomato roots 14 and 21 days after inoculation, respectively, by incubation in 15% (v/v) Pectinex Ultra SP-L ... Voir le document complet
177
Comparative Transcriptome Profiling of Resistant and Susceptible Sugarcane Cultivars in Response to Infection by Xanthomonas albilineans
... comparative transcriptome analysis between resistant (LCP 85-384) and susceptible (ROC20) sugarcane cultivars infected by ...the RNA-seq platform. 24 cDNA libraries were generated with RNA isolated ... Voir le document complet
21
Measurement of the carbon 14 activity at natural level in air samples
... effluents from two Swedish light-water reactors, one boiling water- and one pressurized water reactor, Journal of Radioanalytical and Nuclear Chemistry 198, 1 (1995) ... Voir le document complet
7
FEELnc: a tool for long non-coding RNA annotation and its application to the dog transcriptome
... removed from the predictors (see Supplementary Table ...dog transcriptome for which 20 RNA-seq samples were se- quenced in the frame of the LUPA ...derived from a protein- coding gene ... Voir le document complet
13
Simultaneous quantitative profiling of 20 isoprostanoids from omega-3 and omega-6 polyunsaturated fatty acids by LC-MS/MS in various biological samples
... extracts from SPE were taken for derivatization process. The data obtain from plasma with and without derivatization were compared (data not ...derivatized samples, the background noise of the ... Voir le document complet
85
Measuring genetic differentiation from pooled population samples
... F-Statistics from Pool-Seq Data The R package poolfstat includes functions for the computation of F-statistics from Pool-Seq data in population genomics ... Voir le document complet
2
Detection of Japanese Encephalitis Virus RNA in Human Throat Samples in Laos – A Pilot study
... serum samples of these patients were JEV RT-qPCR negative but 2 (7%) had JEV RNA detected in their throat ...JEV RNA was confirmed by re-testing, and sequencing of RT-qPCR ...JEV RNA detection ... Voir le document complet
6
A high quality Arabidopsis transcriptome for accurate transcript-level analysis of alternative splicing
... three samples, generating ∼220k unique splice ...transcripts from the ini- tial Cufflinks and StringTie assemblies for Datasets 1 and 2, respectively (Supplementary Figure ...transcripts from unknown ... Voir le document complet
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