[PDF] Top 20 Comparative Analysis of Protein -Protein Interface Methods
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Comparative Analysis of Protein -Protein Interface Methods
... Comparative Analysis of Protein - Protein Interface Methods A.G. de Brevern 1 and J. Esque 2 1 Laboratoire DSIMB, INSERM, U 1134, Univ Paris Diderot, Univ. Sorbonne Paris ... Voir le document complet
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Comparative analysis of threshold and tessellation methods for determining protein contacts.
... Analysis of rf according to distance along ...types of interactions, two major types may be distinguished: short- and long-range interactions 86, 87 ...prediction of protein folding ... Voir le document complet
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A Crystal Structure of the Dengue Virus NS5 Protein Reveals a Novel Inter-domain Interface Essential for Protein Flexibility and Virus Replication
... likely interface, possible for NS5 from all ...alignment of the homology models of NS5 from JEV, WNV, YFV, and TBEV based on DENV3 NS5 crystal structure (this work), at the interface ...likely ... Voir le document complet
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Finding Occurrences of Protein Complexes in Protein-Protein Interaction Graphs
... as protein interaction graphs, where proteins are vertices and interactions are edges ...Several methods have been proposed for identify- ing functional modules in protein-protein interaction ... Voir le document complet
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A comparative analysis of interface erosion tests
... sensitivity of a soil to a hydraulic stress. Analysis of these test results by existing methods leads to values of erosion rate coefficient and critical shear stress which are specific ... Voir le document complet
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Neutron structure of type III Antifreeze Protein allows the reconstruction of AFP-ice interface
... and Methods Production and characterization of perdeuterated type-III AFP (AFP D) The synthetic gene of the type-III AFP corresponding to the sequence of the 1HG7 PDB entry ...weight of ... Voir le document complet
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Comprehensive comparative analysis of 5′-end RNA-sequencing methods
... impact of genetic variation in non-coding regions on gene ...thousands of loci associated with human diseases in non-coding regions, the challenge is to relate genetic variants to their mechanism of ... Voir le document complet
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From Protein Corona to Colloidal Self-Assembly: The Importance of Protein Size in Protein-Nanoparticle Interactions
... Size-Dependent Protein–Nanoparticle Interactions in Citrate-Stabilized Gold Nanoparticles: The Emergence of the Protein ...Aude. Protein Corona Composition of Silica Nanoparticles in ... Voir le document complet
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Large-scale prediction of protein-protein interactions from structures
... review of the problem of predict- ing interactions using structural ...developing methods to predict whether two proteins ...the analysis of whole proteomes in order to identify ... Voir le document complet
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Comparative study of encapsulation of vitamins with native and modified soy protein
... Grafting of fatty acid chains to proteins by acylation is well known in order to enhance their hydrophobicity, surface-active functionality and emulsifying capacity ( Matemu, Kayahara, Murasawa, Katayama, & ... Voir le document complet
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The current landscape of coronavirus-host protein-protein interactions
... remodeling of intracellular lipid membranes induced by coronavirus ...components of the prohibitin complex and MAVS, a pivotal adaptor in viral RNA sensing and interferon induction [ 72 ...composed ... Voir le document complet
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Protein-Protein Interaction in Purple Membrane
... form of a two-dimensional crystal, consisting of 75% (wt/wt) of a single protein, bacteriorhodopsin (BR), that functions as a light-activated proton pump, and 25% various lipid species (mostly ... Voir le document complet
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Predicting biomass and grain protein content using Bayesian methods
... [26] G. Poyiadjis, A. Doucet, and S. Singh, “Maximum likelihood parameter estimation in general state-space models using particle methods,” in Proc of the American Stat. Assoc, 2005. [27] F. Gustafsson, F. ... Voir le document complet
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MoBiFC: development of a modular bimolecular fluorescence complementation toolkit for the analysis of chloroplast protein-protein interactions
... characterisation of protein protein interactions (PPIs) is important for understanding the assembly of macromolecular machines and deciphering the signal transduction pathways that are ... Voir le document complet
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Linker-scanning analysis of the HIV-1: integrase protein
... Plasterk, Structure-based mutational analysis ofthe C-terminal DNA-binding domain ofhuman immunodeficiency virus type] integrase: criticat residues for protein oligornerization and DNA b[r] ... Voir le document complet
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Comparative Assessment of Protein Kinase Inhibitors in Public Databases and in PKIDB
... Keywords: protein kinase inhibitors; clinical trials; approved drugs; database; chemometrics.. 32.[r] ... Voir le document complet
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Structure-based algorithms for protein-protein interactions
... number of elements proportional to the squared number of the training struc- ture ...size of available RAM, for instance, explicit storage of the matrix used in the current study requires ... Voir le document complet
108
Rescoring ensembles of protein-protein docking poses using consensus approaches
... asset of consensus rescoring when used in combination with the native ZDOCK scoring ...use of consensus rescoring is critical in Figure 4. For all these protein-protein complexes, no ... Voir le document complet
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Revisiting the description of Protein-Protein interfaces. Part I: Algorithms
... Unité de recherche INRIA Sophia Antipolis 2004, route des Lucioles - BP 93 - 06902 Sophia Antipolis Cedex France Unité de recherche INRIA Futurs : Parc Club Orsay Université - ZAC des Vi[r] ... Voir le document complet
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Compacting local protein folds with a Hybrid Protein: Compacting local protein folds
... L’archive ouverte pluridisciplinaire HAL, est destinée au dépôt et à la diffusion de documents scientifiques de niveau recherche, publiés ou non, émanant des établissements d’enseignemen[r] ... Voir le document complet
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