Top PDF BioPortal: A Web Repository for Biomedical Ontologies and Data Resources
BioPortal: A Web Repository for Biomedical Ontologies and Data Resources
... ABSTRACT Biomedical ontologies provide essential domain knowledge to drive data integration, information retrieval, data annotation, natural- language processing, and decision ...Center ...
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Using BioPortal as a Repository for Mediating Ontologies in Ontology Alignment
... large biomedical track with the two versions of each ontol- ogy are in Table ...mediating ontologies were determined using the fast- selection ...MOs for the anatomy track were in the top four MOs ...
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Modest Use of Ontology Design Patterns in a Repository of Biomedical Ontologies
... provide a means to enhance ontology development by cap- turing best practice and reducing ...large-scale biomedical ontology development. As a starting point for a larger ...
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Comparing BioPortal and HeTOP: towards a unique biomedical ontology portal?
... language) and since HeTOP is dealing with multilingual con- tent, T/O numbers are not good comparison indicators: the more relevant figures are the term number and the total relations ...Indeed, ...
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A Web Application Towards Semiotic-based Evaluation of Biomedical Ontologies
... of biomedical ontology re- search impacting Big Biomedical Data, there will be a need for knowl- edgebase evaluation that is both systematic and also engage a community of ...
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AgroPortal: an open repository of ontologies and vocabularies for agriculture and nutrition data
... and generic approach where users can themselves easily participate to the platform, upload and comment content (ontologies, mappings, ...53 ontologies and we are working on 37 ...
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Using Aber-OWL for fast and scalable reasoning over BioPortal ontologies
... certain web-based features for browsing, comparing, visualising and processing ...many ontologies. Such a feature would enable the use of semantics and deductive inference when ...
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Semantic Indexing of French Biomedical Data Resources
... French data). In addition to the SIFR Annotator and in collaboration with Stanford, we developed a proxy web service for the NCBO Annotator to process English data and ...
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Folksonomy Resources as a Data Source for the Social Data in Semantic Web
... Social data, folksonomies, ontologies, automatic classification 1 Introduction Early this century, two substantial changes in the evolution of the Web appeared: i) Tim Berners-Lee advocated his ...
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A Semantic Web Repository for Managing and Querying Aligned Knowledge
... concepts and terminology from multiple ...semantic web domain as RDF documents and OWL ontologies are quite heterogenous, yet often describe related ...goal for ontology matching is to ...
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On the Use of Transformation and Linked Data Principles in a Generic Repository for Semantic Web Services
... Linked Data principles, can be formed to expose these transformations over a service repository in a RESTful ...the repository considers the treatment of templates, used as the basis ...
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The SWISS-MODEL Repository and associated resources
... diverse data in heterogeneous formats. Very often, data exchange within one domain, ...sequence-based data resources, is relatively straightforward, but seamless exchange between ...
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Roadmap for a multilingual BioPortal
... of data being released and linked over the Web ...today Web content is mainly in English, followed by Chinese and Spanish, 2 the vision of the Semantic Web is to be able to ...
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The Epidemic Marketplace Platform: towards semantic characterization of epidemiological resources using biomedical ontologies
... is a platform for integrating and sha- ring epidemiological data, which aims at supporting transpa- rent, seamless access to distributed, heterogeneous and redundant resources ...
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Introducing WebProtégé 2 as a Collaborative Platform for Editing Biomedical Ontologies
... scenario: A biomedical scientist needs to develop an ontology to describe data on brain development—a subject that is not well covered by biomedical ontologies today in ...
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Integrating and Warehousing Liver Gene Expression Data and Related Biomedical Resources in GEDAW
... Ontological Resources Relating genotype data on genes with their phenotype during the integration process is essential to be able to associate gene expression levels to a pathological ...Tremendous ...
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eagle-i: ontology-driven federated search and data entry tools for discovering biomedical research resources
... ontology; data collection tools comprising an ETL toolkit and a web-based, ontology driv- en Semantic Web Entry and Editing Tool (SWEET); institu- tional triple-store ...
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SOBOLEO -- A Repository for Living Ontologies
... is a web based system that enables groups of people to collaboratively develop and use SKOS ontologies and semantically organized information ...development and refinement of ...
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The IWGSC Data repository and wheat data resources hosted at URGI: Overview and perspectives
... Michael Alaux The IWGSC data repository and wheat data resources hosted at URGI:.. overview and perspectives Michael Alaux.[r] ...
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Biomedical imaging ontologies: A survey and proposal for future work
... cancers and then mapped those genes to metabolic and signaling ...of data deriving from different sources. What this means is that data is aggregated not merely from a syntactic point ...
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