long read sequencing
A simple method for high molecular-weight genomic DNA extraction suitable for long-read sequencing from spores of an obligate biotroph oomycete
... time sequencing (SMRT) or nanopore-based sequencing technologies, ...of sequencing by providing average reads of 10 kb. These advances in long-read single molecule sequencing ...
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Near-chromosome level genome assembly of the fruit pest Drosophila suzukii using long-read sequencing
... PacBio long- read sequencing data and assembled a novel, high-quality ...high-throughput sequencing approaches, as well as manipulative genetic technologies to study ...
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A new method for long-read sequencing of animal mitochondrial genomes: application to the identification of equine mitochondrial DNA variants
... one read satisfying the following criteria: the read aligns to more than 8000 bp of the mtDNA reference sequence and more than 80% of the read aligns to the reference mtDNA ...different read ...
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Long-fragment targeted capture for long-read sequencing of plastomes
... and sequencing Illumina libraries were constructed following the protocol of Rohland and Reich (2012) using 6- bp barcodes and Illumina indices, with extra steps added to allow for amplification and in- solution ...
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Robust Detection of Somatic Mosaicism and Repeat Interruptions by Long-Read Targeted Sequencing in Myotonic Dystrophy Type 1
... Int. J. Mol. Sci. 2021, 22, 2616 3 of 24 both the size of large CTG repeats, the presence of interruptions and somatic mosaicism in DM1. The present study is an extension of previously reported results in DM1 patients ...
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Long-Read Genome Sequence of the Sugar Beet Rhizosphere Mycoparasite Pythium oligandrum
... for long-read sequencing and library preparation The oomycete was cultivated in liquid Potato Dextrose Broth (PDB) medium at 28° for ...and sequencing were per- formed at the GeT-PlaGe core ...
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A tunable filter for high molecular weight DNA selection and linked-read sequencing
... for long read sequencing We finally proceeded to the selection of high MW genomic DNA from the melon Cucumis melo ...of sequencing data obtained with or without size ...by sequencing on ...
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Long-read only assembly of Drechmeria coniospora genomes reveals widespread chromosome plasticity and illustrates the limitations of current nanopore methods
... mined its genome. Despite attempts to complete the assembly, the Swe2 genome remained fragmented, with an N50 of 3.86 Mb [5]. In addition to the genome of Swe2, a second D. coniospora genome is available (referred to ...
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Mapdecode : inventory and benchmark of read mapping tools
... chromosomal rearrangements) to name but a few, starts with mapping the reads on the reference genome. Over the last seven years, many mapping methods have been proposed to efficiently cope with the avalanche of data ...
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Social Clicks: What and Who Gets Read on Twitter?
... 3.1 Background Social media such as Twitter allow news consumption to expand beyond the constraints of a fixed number of head- lines and printed articles. Today’s landscape of news is in theory only limited by the ...
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[PDF] Tutoriel Arduino serial read [Eng] | Cours Arduino
... This line is actually only necessary if you are using an Arduino Leonardo, because the Arduino Uno automatically resets the Arduino board when you open the Serial Monitor, whereas this d[r] ...
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Towards a Read/Write Web of Linked Data
... from Read/Only to ...the Read-Write Linked Data as a social network where actors copy the data they are interested into, update it and publish updates to exchange with ...
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Swine genome sequencing consortium (SGSC): a strategic roadmap for sequencing the pig genome.
... Genome Sequencing Consortium (SGSC) was formed in September 2003 by academic, government and industry representatives to provide international coordination for sequencing the pig ...the sequencing of ...
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Comparing Comprehension of a Long Text Read in Print Book and on Kindle: Where in the Text and When in the Story?
... a long text included in a book, there is more to reading than meets the ...a long text printed on many pages, reading does not only involve the eyes: it also involves the ...already read and on the ...
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Temporary Read-Only Permissions for Separation Logic
... as long as its initial state is restored upon ...our read-only permissions, which at the same time impose a restriction and offer a guarantee: they prevent the current function from modifying the ...
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Assembly improvements by read mapping and phasing
... the read mapping We choose to conceive a whole new algorithm to map read on a De Bruijn ...the read mapping itself, assembly, read compression and maybe phasing as an experimental feature of ...
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Are words read by letters? (Lisons-nous par lettres?)
... Dans le but d'explorer le rôle des lettres en lecture, nous avons évalué la préférence pour les lettres isolées, les non-mots de trois lettres, les mots de trois lettres et les mots de[r] ...
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Read invisibility, virtual world consistency and permissiveness are compatible
... states read by the committed transactions are mutually consistent (in the sense that they can be totally ordered) but (3) while the global state read by each aborted transaction is consistent from its ...
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Nanopore DNA sequencing channel modeling
... The “Channel encoding” block includes error-correction methods at two levels, as presented in Fig. 2. The first level corrects deletions and insertions introduced by synthesis; the second level deals with substitution ...
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Task sequencing for sensor-based control
... all the degrees of freedom of a robot during the execution of a task. In this article a new solution is proposed. The key idea is to divide the global full-constraining task into several subtasks that can be applied or ...
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