Detection of long repeat expansions from PCR-free whole-genome sequence data

(ii) aligned these reads back onto the reference genome, using the same parameters as used for the experimental HTS data; (iii) identi- fied the chromosomal coordinates of the unique

Local minima were obtained by performing a zero-temperature Monte-Carlo simulation with the energy function in Eq (2), starting from initial conditions corresponding to

In theory, similar or better prediction accuracies than those reported in this study can be obtained if data on all the individuals in the meta-GWAS are available, and if they

Background: This study aimed at (1) comparing the accuracies of genomic prediction for parasite resistance in sheep based on whole-genome sequence (WGS) data to those based on 50k

In the impcons strategy that targets both genetic improvement and conserva- tion, using estimated relationships based on SNP chip or WGS data resulted, respectively, in the

Summary statistics of Breakdancer (BD), Pin- del (PD) and Overlap method in HOM and HET simulation sets; Table S3: Precision of each SV detection method for deletions, inversions

Functional enrichment analysis of genes that are spe- cific to the YNLC breed revealed that many candidate genes are related to immunity and disease resistance (see Additional file 

 Descartes’  rule  of  signs  and  the  identifiability  of  population   demographic  models  from  genomic  variation  data..  Efficient  inference  of