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Structure, localization and transcriptional properties of
two classes of retinoic acid receptor alpha fusion
proteins in acute promyelocytic leukemia (APL):
structural similarities with a new family of oncoproteins.
P Kastner, A. Perez, Y Lutz, C. Rochette-Egly, M Gaub, Beatrice Durand, M
Lanotte, R. Berger, P. Chambon
To cite this version:
Structure,
localization and
transcriptional properties
of
two
classes of retinoic acid receptor
afusion
proteins
in
acute
promyelocytic
leukemia
(APL):
structural similarities
with
a
new
family
of
oncoproteins
Philippe
Kastner1, Aymee
Perez',
Yves
Lutz,
Cecile
Rochette-Egly,
Marie-Pierre
Gaub,
Beatrice
Durand,
Michel
Lanotte2,
Roland
Berger2 and Pierre Chambon
Laboratoire deG6n&tique Moleculaire desEucaryotes, CNRS, Unite
184de BiologieMol6culaire etdeGenieGenetique, INSERM, Institut
de Chimie Biologique, Faculte deMedecine 11, rueHumann,67085
StrasbourgCedex, and 2Unit6 301 del'INSERM, SDI No 15954.1
CNRS, CentreHayem andIGM, and Laboratoire Central
d'Hematologie, H6pital Saint-Louis, Paris, France
'Shouldbe consideredasequal firstauthors
Communicatedby P.Chambon
Acute promyelocytic leukemia (APL) is due to a
chromosomal t(15;17) translocation which involves a
novel human gene, Myl, (also named PML) and the
retinoic acid (RA)receptora(RAR-a) gene. We report here the characterization of Myl and of the reciprocal MylRAR (PMLRAR) and RARMyI
(RARPML)
fusion transcripts which are found in two classes of APLpatients. Myldisplays similarities with a new
family
of proteins of which some members are fused to proto-oncogenesin thetransforming proteins
RFP-retand T18.Thespeckled nuclear localization of Myl, aswell asits
sequence homology with the 52kDa component ofthe
RO/SSA ribonucleoprotein particle,suggest thatMylmay
be present ina ribonucleoprotein complex. Incontrast tobothMylandRAR-oe whoselocalizationisessentially
nuclear in the presenceorabsence ofRA,MylRAR which
is largely cytoplasmic in the absence ofRA appearsto
betranslocatedtothe nucleus inthepresenceofRA.
Myl
andMylRARcanassociatein vitro and this association ismediated byacoiled coil intheMylsequence. In vivo this association results in a colocalization of Myl and
MyIRAR
which is identical to that of MylRAR alone.Studies of activation of
transcription
from thepromotersof severalRA target genesindicate thatMylRARs have
altered
transcription activation properties whencompared with RAR-a. Most notably, MylRAR
repressses markedly the activity of some RA target promoters intheabsence ofRA. Western blotanalyses
ofpatient samplesshow that
MylRAR
isexpressedto amuch
higher
levelthanwildtypeRAR-a
originating
fromthe normal allele. Taken together, these results suggest thatMylRARmay interfere inadominantmannerwith both Myl and RAR functions.
Key words: APL/coiledcoil/Myl (PML)/RAR-a/MylRAR
(PMLRAR) fusion/RARMyl (RARPML) fusion
Introduction
Chromosomal abnormalities arefrequently associated with
malignant diseases. In a number of instances, specific
chromosomal translocations have beencharacterized,which
generate fusion genes encoding proteins with oncogenic properties (Cleary, 1991; Sawyers etal., 1991).Aspecific
t(15;17) reciprocal translocation is the hallmark of human acutepromyelocytic leukemia (APL) (Rowley et al., 1977).
Thelocalizationofthe human retinoic acid receptora (RAR-a) gene in the region of chromosome 17 which is involved inthis translocation, led us to speculate that disruption of this gene may be related to APL etiology (Mattei et al.,
1988). It has been shown subsequently that the chromosome 17 breakpointliesinfact within the RAR-a gene (Borrow etal., 1990;deTheetal., 1990; Alcalayetal., 1991;Chen etal., 1991) andthat,in APL cells, transcripts are produced from a fusion between Myl, a novel gene on chromosome 15, and theRAR-ca gene (de The et al., 1990; Longo et al.,
1990; Warrel etal., 1991). This finding is especially interesting, since APL patients undergo complete remission after a few weeks of treatment with retinoic acid (Huang etal., 1988; Castaigne etal., 1990;Chomienneetal., 1989; Warrel et al., 1991; Clarkson, 1991, for review).
Retinoic acid (RA) is a vitamin Aderivativewhich exerts
profound effects on vertebrate development and on cell growth and differentiation (Brockes, 1989 for a review).
ThreeRAR genes,RAR-ce,,Band -yhavebeencharacterized
and ithas been shown that several RAR isoforms can be generated from each gene subtype(eithera, ,B or
"y)
bydif-ferential use of two promoters and alternative splicing
(Giguereetal., 1987; Petkovich etal., 1987; Brand etal.,
1988; Zelent etal., 1989, 1991; Kastner et al., 1990; Leroy
etal., 1991). RARs belong to the superfamily of nuclear
steroid/thyroid hormone receptors which act as
ligand-inducible transcriptionfactors modulating the expression of target genes (Evans, 1988; Green and Chambon, 1988 for reviews). The amino acid sequence of RARs has been divid-edinto sixregions(A -F)basedondifferent degrees of
con-servation, with regions C and E being highly conserved
(Kastneretal., 1991, for review). Region C contains the zinc fingerDNA binding domain, whereas region E cor-responds to amultifunctional region containing both the RA
binding domain, aRA-inducible transcription activation func-tion and possibly an interface involved in protein-protein
interaction (Glassetal., 1990). Regions B, D and F are less
ornot conserved when comparing the three RAR subtypes within a given species, whereas they are highly conserved for a given subtype across species. Furthermore, the
N-terminal Aregion which is isoform specific is also conserv-edacross species for a given isoform of either RAR-a, ,B
or
-y.
These region A differences may correspond to cell-and promoter-specific transcriptional activation properties of the various RAR isoforms (S.Nagpal and P.Chambon, unpublished results). The possible functions of B, D and Fregions is unknown.
Wereport here thecloningofMyl and the characterization
of twosetsofMylRARand RARMyl transcripts and proteins thatoccurintwoclasses of APL patients. Structural features ofthe Myl protein, the intracellular localization of Myl,
P.Kastner et al.
MyiRARand RARMyl, the transactivation properties of the
MyiRARchimeras on RA target genes, and the association between Myl andMylRAR, provide the basis for speculating on how these fusion proteins may be involved in APL
etiology.
Results
Cloning of Myl (PML) cDNA
The point of fusion in the Myl
-RAR-ca
transcript which was found in the APL-derived cell line NB4 (Lanotte et al.,1991), is located at the splicing junction between the exons
encoding the A and B regions of
RAR-oa
(de The etal.,1990;seeRAR-a in Figure 2). We first used anchored PCR to clone 1798 nucleotides of Myl 5' cDNA sequences corresponding to RNA sequences located upstream of the RAR-a B region in Myl -RAR RNA present in the NB4 cellline (Figure 1, sequence located upstream of the open
triangle designatedA). The 3' part of the Myl cDNA was clonedby PCRusing Myl-specific primers and
oligo(dT)-containingprimers. The total length of the cloned Myl cDNA is 2199bp (Figure 1 and data not shown), which may correspond to the smallest Myl transcript species detected on Northern blots (de The et al., 1990).
An open reading frame (ORF) conceptually encoding a
633aminoacid protein (calculated molecularweight 70 028
Daltons) is present in this Myl sequence (nucleotides 142-2040, Figure 1).Although the readingframe remains open up tothe 5' end of the cDNA, we could not isolate any further5'-extended cDNA byanchored PCR, and the present sequence maythereforecorrespond to a nearly full
lengthMyl cDNA. Furthermore, the similar size of cloned and endogenousMylRARproteins (see below) supports the ideathatthe present cDNA sequence is not missing the 5' end oftheMyl coding sequence, and hence, that the first AUG (nucleotides 142-144) could be the Myl initiation codon. Both the first and the second (Met23) AUG are
locatedinasequence contextacceptableforinitiation codons
(Cavener and Ray, 1991). Since in vitro transcribed and
translated Myl mRNA yields a doubletprotein band (data not shown), both AUGs may in fact beused as initiation codons.
We also identified two shorter cDNA isoforms, presumably lacking specific Myl exons (nucleotides
219-278 and 1396-1539, respectively; see Figure 1, sequences inbrackets, anddatanotshown). These putative alternative splicing events would generate Myl proteins deleted for amino acids 27-46 and 419-466, named
hereafter Myll (PML1) andMyl2(PML2)isoforms(seeMyl in Figure 2).
HybridizationofMyl cDNA to aSouthernblot containing
DNA from apanel ofhuman-hamster cell hybrids (Bios Blot, Bios Corporation; data not shown) confirmed that the Myl gene islocatedonchromosome 15 (de The et al., 1990). DifferentMyIRAR (PMLRAR) transcripts in two
classes ofAPLs
The above results indicate that the cloned Myl-RAR-a fusion protein present in NB4 cells, named hereafter
MylRAR-A
(PMLRAR-A), should possess 552 Myl amino acids N-terminal to the RAR-a B region. Sequencing of NB4 cell cDNA synthesized by PCR using a Myl primer (nucleotides 1742-1762) and a RAR-a 3'-UTR primer(nucleotides 1597 -2015, numberingas in Petkovich etal., 1987),confirmed that the putativeMylRAR-Acontains the
integrityofthe RAR-oa B-Fregions and thus corresponds
to a955 amino acidlong protein(mol. wt 105 815Daltons, Figures 1 and2,and datanotshown). The presence in NB4 cells of RNA transcripts -1 kb longer than RAR-ao transcripts (deTheetal., 1990)isconsistentwith this
con-clusion. This altered pattern of RAR-o transcripts is similar
to that found in a number of APLpatients (Longo etal., 1990; Warrel etal., 1991), and we detected by PCR the MylRAR-A transcript in another APL patient, suggesting
that the MylRAR-A form of MylRAR fusion transcript is notrestrictedtothe NB4 cell line. In addition, sequencing of NB4 cell-derived cDNA (Figure 2b, primers Ml andR2),
demonstrated the existence of MylRAR transcripts which were deleted for the same nucleotide sequence missing in the Myl2 isoform (see Figure 2b; lane 1). This alternative
form of MylRAR-A protein will be referred to as
Myl2RAR-A (PML2RMyl2RAR-AR-Myl2RAR-A) (see Figure 2). Myl1RAR-A (PML1RAR-A), the putative MylRAR-A isoform deleted
forthe Myl sequencing missing in the Myl 1 isoform(Figure 2), has not yet been identified.
PCR-assisted analysis of RNA prepared from cells of sevenother APL patients revealedMylRARfusionproducts
smaller than those found in NB4 cells(seeFigure 2b,primers Ml andR2,lanes3 and4,and datanotshown).Sequencing of these PCR-amplified cDNAs showed that the point of fusion with the RAR-ai B region occurred atposition 1324 inthe Myl cDNA sequence (amino acid 394, see Figure 1,
open triangle B). The deduced MylRAR fusion protein
(nam-edhereafter MylRAR-B or PMLRAR1B) is 797 amino acids long(mol. wt89 288Daltons),andcomprisesthe first 394 amino acids ofMyland RAR-c B - F regions. Therefore, these patients represent a second class of APLs (class B),
with MylRAR-Btranscript andprotein smaller than those found in the NB4-like class A patients, and likely to
corres-pondtothe shorter class of size-altered RAR-x transcripts
reported previously in some APL patients (Longo etal.,
1990; Warrel et al., 1991). The putative MylRAR-B cDNA isoformcorrespondingtotheMyll isoform
(MylIRAR-B,
see Figure 2a) has not yet been detected.
ReciprocalRARMyI (RARPML) transcripts in APL cells Welooked for thepossibleexistence of fused RARet-Myl
transcripts originating from the reciprocal t(15;17) trans-location. PCR amplification with primers from the RAR-cxl 5'-UTR and the Myl3'
region
(seeFigure 2b,
primersRI and M2, respectively) yielded amplified cDNAs with RNA preparedfrom NB4 cells and class B APL patients,
but not with RNA derived from promyelocytic leukemia HL60 cells (Breitmanetal., 1980) (Figure2c and data not
shown). Sequencing demonstrated that these cDNAs
correspond toreciprocal RARMyl
transcripts (Figure
2a).InNB4 cells(classApatients), thetranscript conceptually
encodes a 140 amino acid long protein
(RARMyl-A
orRARPML-A),mol. wt 14958
Daltons)
which fuses the Al region of RAR-a 1 tothe 80 C-terminalaminoacids ofMyl,whereas thecorrespondingclass Bpatienttranscriptencodes a298 amino acid long protein(RARMyl-B or RARPML-B, mol.wt31 484Daltons)(Figure 2a,and datanotshown).
Inclass B patients, we found alsoRARMyl2-B transcripts
inwhichMylnucleotides 1396- 1539aredeleted(Figures
1, 2aandb),conceptuallyencodinga250 amino acidlong
1 GCTCTCCAGAGGCGGGCCCTGAGCCGGCACCTCCCCTTTCGGACAGCTCAA
52 GGGACTCAGCCAACTGGCTCACGCCTCCCCTTCAGCTTCTCTTCACGCACTCCAAGATCTAAACCGAGAATCGAAACTAAGCTGGGGTCC
142' AGCCTGCACCCGCCCGATCTCCGAGGCCCCAGCAGGACCCCGCCCGGCCCCAGGAGCCCAC A CCTCCCCEGAGACCCCCTCT 1 E P A P A R S P R P Q Q D P A R P Q E P T P P P E T P S 232 GAAGGCCGCCAGCCCAGCCCCAGCCCCAGCCCTACAGAGCGAGCCC GCTTCGGAGGAGGAGTTCCAGTT CTGCGC CCAGCAA
31 E G R Q P S P S P S P T E R A A S E E E F Q F L R C Q Q C 322 CAGGCGGAAGCCAAGTGCCCGAAGCTGCTGCCTTGTCTGCACACGCTG TCAGGATGCCTGGAGGCGTCGGGCATGCAGTGCC CATC
61 0 A E A K C P K L L P CCL HT L CS G
CO
L E A S G M Q C P I 412 TG CGCCCTGGCCCCTAGGTGCAGACACACCCGCCCTGGATAACGTCTTTTTCGAGAGTCTGCAGCGGCGCCTGTCGGTGTACCGG 91 Q A P W P L G A D T P A L D N V F F E S L Q R R L S V Y R 502 CAGATTGTGGATGCGCAGGCTGTGTGCACCCGCTGCAAAGAGTCGGCCGACTTCTGGTGCTTTGAGTGCGAGCAGCTCCTCTGCGCCAAG 121 Q I V D A Q A V C T R C K E S A D F W C F E C E Q L L C A K 592 TGCTTCGAGGCACACCAGTGGTTCCTCAAGCACGAGGCCCGGCCCCTAGCAGAGCTGCGCAACCAGTCGGTGCGTGAGTTCCTGGACGGC 151 C F E A H Q W F L K H E A R P L A E L R N Q S V R E F L D G 682 ACCCGCAAGACCAACAACATCTTCTGCTCCAACCCCAACCACCGCACCCCTACGCTGACCAGCATCTACTGCCGAGGATGTTCCAAGCCG 181 T R K T N N I F C S N P N H R T P T L T S I Y C R G C S K P 772 CTGTGCTGCTCGTGCGCGCTCCTTGACAGCAGCCACAGTGAGCTCAAGTGCGAC TCAGCGCAGAG RCCAGCAGCGACAGGAGGAG 211 L C C S C A L L D S S H S E L K C D I S A E UI Q Q R Q E E 862 GACGCCATGACGCAGGCGCTGCAGGAGCAGGATAGTGCCTTTGGCGCGGTTCACGCGCAGATGCACGCGGCCGTCGGCCAGCTGGGCCGC 241 D A M T Q A oQ E Q D S A®DG
A V H A QQ H A A V G Q Q G R 952 GCGCGTGCCGAGACCGAGGAGCTGATCCGCGAGCGCGTGCGCCAGGTGGTAGCTCACGTGCGGGCTCAGGAGCGCGAG5GCTGGAGGCT 271 A R A E T E E L I R E R O R Q V V A H O R A Q E R E L E A 1042 GTGGACGCGCGGTACCAGCGCGACTACGAGGAGATGGCCAGTCGGCTGGGCCGCCTGGATGCTGTGCTGCAGCGCATCCGCACGGGCAGC 301 V D A R Y Q R D Q E E M A S R O G R L D A VD
Q R I R T G S 1132 GCGCTGGTGCAGAGGATGAAGTGCTACGCCTCGGACCAGGAGGaGCTGGACATGCACGGTTTCCTGCGCCAGGCGCTCTGCCGCCGCGC 331 A L V Q R M K C Y A S D Q E UV L D M H G FODR
Q A L C R R 1222 CAGGAGGAGCCCCAGAGCCTGCAAGCTGCCGTGCGCACCGATGGCTTCGACGAGTTCAAGGTGCGCCTGCAGGACCTCAGCTCTTGCATC 361 Q E E P Q S L Q A A V R T D G F D E F K V R L Q D L S S C IB
1312 ACCCAGGGGAAAGATGCAGCTGTATCCAAGAAAGCCAGCCCAGAGGCTGCCAGCACTCCCAGGGACCCTATTGACGTTGACCTcCCCGAGV
391 T Q G K D A A V S K K A S P E A A S T P R D P I D V D L P E 1402 GAGGCAGAGAGAGTGAAGGCCCAGGTTCAGGCCCTGGGGCTGGCTGAAGCCCAGCCTATGGCTGTGGTACAGTCAGTGCCCGGGGCACAC 421 E A E R V K A Q V Q A L G L A E A Q P M A V V Q S V P G A H 1492 CCCGTGCCAGTGTACGCCTTCTCCATCAAAGGCCCTTCCTATGGAGAATGTCTCCAATACAACGACAGCCCAGAAGAGGAAGTGCAGC 451 P V P V Y A F S I K G P S Y G D V S N T T T A Q K R K C S 1582 CAGACCCAGTGCCCCAGGAAGGTCATCAAGATGGAGTCTGAGGAGGGGAAGGAGGCAAGGTTGGCTCGGAGCTCCCCGGAGCAGCCCAGG 481 Q T Q C P R K V I K M E S E E G K E A R L A R S S P E Q P R 1672 CCCAGCACCTCCAAGGCAGTCTCACCACCCCACCTGGATGGACCGCCTAGCCCCAGGAGCCCCGTCATAGGAAGTGAGGTCTTCCTGCCC 511 P S T S K A V S P P H L D G P P S P R S P V I G S E V F L PA
V 1762 AACAGCAACCACGTGGCCAGTGGCGCCGGGGAGGCAGAGGAACGCGTTGTGGTGATCAGCAGCTCGGAAGACTCAGATGCCGAAAACTCG 541 N S N H V A S G A G E A E E R V V V I S S S E D S D A E N S 1852 TCCTCCCGAGAGCTGGATGACAGCAGCAGTGAGTCCAGTGACCTCCAGCTGGAAGGCCCCAGCACCCTCAGGGTCCTGGACGAGAACCTT 571 S S R E L D D S S S E S S D L Q L E G P S T L R V L D E N L 1942 GCTGACCCCCAAGCAGAAGACAGACCTCTGGTTTTCTTTGACCTCAAGATTGACAATGAAAGTGGGTTCTCCTGGGGCTACCCCCACCCC 601 A D P Q A E D R P L V F F D L K I D N E S G F S W G Y P H P 2032 TTTCTAATTTAGTCTCTGAGTCCCAAAAAGAAGTGCAGGCAGAGCATCTGCCAGGCCCAGGAGAGCTCTGAGCTCTGGCCAACAACTGCA 631 F L I 2121 GCCAGGCTGGGCAGAGCACTCCGGCTCACCTGGGCTCCTGGCGTGTCATTTGCTGGCTTGAATAAAGATGTCCGCCTTAAAAA AFig. 1. MylcDNAand amino acid sequences. Thededucedaminoacidsare shown below theirrespectivecodons. The two regions (nucleotides
219-278 and 1396-1539, respectively) which are excluded byalternative splicing in Myll andMyl2 (see Figure 2a) are bracketed. The TAG stop
codon andthe polyadenylation signal areunderlined. The open triangles A and B indicate the point where the Myl sequence is fused to RAR in class Aand B APLs,respectively. The peptide used to generate Myl antibodies is underlined by a dashed line. The first boxed regioncorrespondstothe
first cysteine-rich motif(Figure 3a); withinit, the conserved residues are circled. Threecysteine/histidine-rich clusters which may form zinc
finger-likestructures are underlined. The region which is likely to adopt a coiled coil structure is also boxed [the boundaries correspond to the limitofthe
predicted ca-helical protein segment (Gascuel and Golmard, 1988)], and within it,hydrophobic amino acids occurring at the first and fourth position ofthe heptadrepeat arecircledand underlined, respectively.
Detection ofMyIRAR-A (PMLRAR-A) and -Bproteins (Figure 2c, lane 5), whereas
MylRAR-A
andMyl2RAR-AThe cloned MylRAR-A and MylRAR-B cDNAs were cDNAs yieldedpolypeptidesmigrating with an apparent mol.
expressed in Cos-1 cells and the proteinswere revealedby wt of - 110 kDa(Figure 2c, lane 4, and datanotshown).
Western blottingwithapolyclonal antibody directedagainst Whether the
-110
kDaMylRAR-A
species correspondstothe F region of
RAR-c.
MylRAR-A was detected as a initiation from the second AUG (see above and Figure 1)P.Kastneretal.
Fig. 2. Two classes ofMyiRAR and RARMyl transcripts and proteins. (a) Schematic structure ofMyIRAR andRARMyl cDNAs and proteins found in two classes of APL patients. On top, RAR-al and Myl cDNAs and proteins are schematically represented. RAR-cal A-F regions have
been defined on the basis of sequence comparisons between the different RAR subtypes (Zelent et al., 1989; Kastner etal., 1991). cDNA nucleotides
(top lines; numbering ofRAR-cal is according to Brand et al., 1990), and amino acids (lower lines) are numbered. The triangle at position 744 in
RAR-cxl
indicates the fusion point in MylRAR and RARMyl transcripts. A and B triangles in Myl indicate thepoints offusion between Myl andRAR-ac1
sequences in class A and B patients, respectively. The black boxes correspond to the three cysteine-rich clusters, which may form Znfinger-like structures in Myl. The Myl region which is likely to adopt a coiled coil structure is represented by ahatched box. The two regions of Myl which are excluded in Myll and Myl2transcripts (amino acids 27-46 and 419-466, respectively) are bracketed by dashed lines. Class A and
BMylRAR and RARMyl cDNAs and proteins characterized in APL class A and B, are represented below. In each case the nucleotide and derived
amino acids sequence occurring at the junction is given with the Myl sequence underlined. (b) PCR detection ofMylRAR and RARMyl fusion transcripts. The experiment is schematically represented on top. Myl andRAR-cal cDNAs around the fusion points are depicted and the nucleotides positions corresponding to the5' end of the PCR primer are indicated. The presumptive Myl exon which is excluded in Myl2 by alternative splicing
is bracketed. The PCR detection ofMylRAR and RARMyl transcripts present in NB4 cells and in two class BAPL patients (P1 and P2) is shown below in the left and right panels, respectively. PCR was performed with either the Ml and R2 primers (MylRAR amplification, left panel) orRI and M2 primers (RARMyl amplification, right panel) on cDNA derived from NB4 cells (lane 1), HL60 cells (lane 2)and two APL class B patients
(lanes 3 and 4). Amplified products were separated by electrophoresis and hybridized to end-labeled oligonucleotide probes 01 (left panel) or 02 (right panel). Amplified fragmentscorrespondingto MylRAR-A, Myl2RAR-A, MylRAR-B, RARMyl-A, RARMyl-B andRAR2Myl-B are indicated.
The -500 bp fragment seen in the right panel in lanes 3 and 4 may correspond to an artefactual amplification product since itwas not detected when other primer pairs were used. (c) Detection of cloned and endogenous MylRAR proteins by Western blot. 70i'g protein ofwhole cell extracts
from eitherHL60 cells (lanes 1 and 7), NB4 cells (lane 3) or bone marrow cells from a class B APLpatient (P1, lane 8) or 5-10I g protein of whole cell extracts from Cos-1 cells transfected with either 5
Ag
of expression vectors forhRAR-csl (lanes 2 and 6). MyIRAR-A (lane 5),Myl2RAR-A (lane 4) orMylRAR-B (lane 9), have been separated by electrophoresis on a 10% SDS-acrylamide gel and analyzed by Western blotting (as described in Rochette-Egly et al., 1991) with the rabbit polyclonal antibody RPa(F)directed against the F region of human RAR-cx. Exposure time was 8 h for lanes 2-9 and 40 h for lane 1. The -55 kDa species seen in lane 5 is an in vitro degradation product of MylRAR-A,
since it was not seen when the cells were directly lysed at100° C (not shown). Note that MylRAR-A expression vectors which do ordonot contain
the upstream in frame CTG (nucleotide 19) generate the same protein pattern (not shown), excluding that the 120 kDa polypeptide species could be initiated at that CTG.
the - 120 kDa
MylRAR-A
was similarly detected usingextracts from NB4 cells and cells from class A patients (Figure 2c, lane 3, and unpublished results in collaboration with Dr Pelicci's group). The same 120 kDa species could also be immunoprecipitated with an anti-Myl (amino acid 484-499) polyclonal antibody
[RP(Myl)-l]
and revealed by Western blotting using the anti-RAR-a antibody (data not shown), which further supports the existence of theMylRAR-A
fusion protein. The polypeptide encoded byMylRAR-B
cDNA migrated with an apparent mol. wt of -90 kDa (Figure 2c, lane 9). A protein of similar size was revealed in extracts from cells of class B patients (Figure 2c, lane 8).Itis noteworthy that the level of MylRAR proteins present in APL cells was muchhigher than that of RAR-at
[Figure
2c,
lanes 3 and8; the -50 kDapolypeptidedetected in NB4 cellextractislikely
tobeaMylRAR-Adegradationproduct,
since it
migrated
moreslowlythan RAR-ct1 presentineither Cos-1 transfected cells(lane 2) orHL60 cells (lane 1); notealso that lane 1 was exposed five times longer than lanes 2-9 and that similar amounts of RAR-a RNA were found in
HL60
and NB4cells (not shown)]. Incontrast, the levels ofMylRAR
andRAR-attranscripts appeartobe very similar in both classesofAPLpatients (see Longoet al., 1990; deThe etal., 1990; Warrel etal., 1991), suggesting that
Myl MyIRAR proteinsin APL 55-L C A A 49-D Q I-14-V I D F 14-T C QO 13-V 3 EI 26-LPC 3 DEL 291-I I H L 16-L I G F-16-L I G F 114-D D I 18-N S * * 0 --KCPKLL L -QSRVPKLLE C --VEPVSI C ---AEPMMLE IC ---KEPVSAE WC ---KVPVLTE FC ---ADPVET C --IDATTIV F --IDATTIII tPHLRCDTF --SDLGKTM * 0* 21 21
E.
FX L L ICI
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0 *0 **0** * ** *0 *** * * * 0* *0 * 0
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***
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EAV
Y27 6 T 'rYTWVPThI(T(.MTI TrTM#ThIIVI f'riV, T V'PT.MYTAlk?7VVr- ATIi-~
MYL 189 T18 237 RFP 96 RO-52K 92 RPT-1 96 MYL T18 RFP RO-52K RPT-1 249 293 152 148 152 MYL 310 RFP 213 RO-52K 209 RPT-1 213
F*
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C,NPNHRJTP YC GCSKP _4CcS[LLDS EELKCD- SAEI QRQE AMTQ
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*
|EQDS iAVHAf AAVGaGRARAETEE a E FiQWA QER
DARYQRIj|
EKT TGN fNRII QNQKQVEQ TL KKG IE -B-raf
RVKDLKKRRRA EQARAEILSLTQMEREPI FVWE1EQLYHS HEY LEELDLA
RKQEL&KLEVEI
IKRA4KKTVETQKS$IHA4FIVQQKNFEEEQR
KDERE LKKAKICDEWQDE LQRV ENQIQINVE 9QRj GLRD SKENE CKEKKE M
EE
SRLGRAVLQ
RMKSYASDQ GNS GAIT CNIS A EKQQQPTRE D
RI
EKEA4QQSQ
S RRCHSSALE I|E
vESEN DQTE S HHLELSTLE C* 0 0 0 0 *
Fig. 3. Similarities between Myl and otherproteins. (a) Myl belongstoagroup ofproteinswhich shareacysteine-rich motif. Residues at conserved
positionsareboxed. Stars indicate positionswhere perfectconservation occurs, whereasdots indicatepositionswhere similar, but notidentical,
residues arefound. (b) AlignmentofMyl and T18. Since thevery N-terminal sequences ofMyland T18 (Mikietal., 1991)do notdisplay
significanthomology, alignment is startedatCys57 andCys51 ofMyland T18, respectively. Nohomologywasdetected alsobetweenthe T18 B-RafsequencesandMyl. Residues conserved between Myl andT18 areboxedand indicatedby stars. Conservativereplacements areindicatedby dots. The regioncorresponding tothe cysteine-rich motifdisplayedin (a), aswellas aregion whichmay formacoiledcoil, areboxed. Open
trianglespointtoconserved cysteine andhistidine residuesbelongingtothe secondand thirdCys/Hisclusters in theMyl sequence. Blacktriangles
pointtothehydrophobic residuesdefiningtheheptadrepeats of the putativecoiledcoildomainin MylandT18. Thebeginningof B-Raf in the T18
sequenceis indicated by an horizontalarrow. (c) AlignmentofMyl, T18, RFP, RO-52Kand RPT-1 in the thirdcysteine/histidine cluster and inthe putative coiled coil. Hydrophobicamino acidsdefiningtheheptad repeathavebeenboxedas wellasamino acids which occuratpositions where identical orsimilarresiduesarefound in all fiveproteins. Other symbolsare asin Figure3b. Note also the frequentconservationof amino acids betweenthreeorfouroutof the fiveproteins.
RAR-a mRNA and/or thatMyiRAR proteinsare morestable
than RAR-ct.
Myl (PML) structural features and similarities with
other proteins
The N-terminal part ofMyl contains three clusters rich in
cysteineand histidineresidues, whichmayformzinc
finger-like structures (underlined in Figure 1). The first ofthese clusters (amino acids 57-91) defines a motif which has recently been pointed out in a number of proteins
[CXXCXII
27CXHX(F/L)CXXC(L/I)X3-48CPXC),
see Figure 3a and Freemont etal., 1991]. Several proteins ofthisgroupmaybe involvedin celltransformation: MEL-18
is expressed inmosthuman transformed celllines, butnot
P.Kastneretal. 1 57 229 360 MyIRAR-AI T * 1,1A 1 57 229 36OC MyIRAR-B RAF 1 51 252 W T18 I * B-raf
I
RFP-ret 116 132 255315 IKA7ZA
I ret[2CXXCX,CXHXXCXXCYX,CPXC
motif *Cys/HiscFig. 4.Structuralsimilarities betweenMyIRARs<
fusion proteins T18andRFP-ret. A schematicrej
MylRAR-A, MylRAR-B, T18andRFP-ret isdisj fusionareindicated bytriangles.
innormal tissue (Tagawa et al., 1990); TI mousefusion protein between a novel prol
cysteine-rich motif and the B-Raf prot
etal., 1991; for convenience,the(as yet wild type protein corresponding to the r T18 will be hereafter referred to as T18\ isfusedwiththe ret proto-oncogene in a tr;
resulting from a chromosomal translo(
etal., 1988)and mouse Bmi-1 (aclosere cooperates with Myc in lymphoma den
etal., 1991; van Lohuizen etal., 1991 containing this cysteine-rich motifare ir of gene expression: RPT-1,whichaffects the IL-2 receptor (Patarca etal., 1988),t virus immediates early gene product ICI
HSV geneexpression) (GelmanandSilve
thevaricella zoster virus VZ61 protein (D 1986) which acts negatively on the exp: varicella virus and cellular genes (Nag 1991). This group of proteins includes
-is a yeast proteinrequiredforrepairof U
(Jonesetal., 1988). RAG-1 whichisenc
recombination activating gene (Schatz,
52 kDa component of the RO/SSA(RO-5' tein particlewhichisanautoantigen in
lul
andSj6drensyndrome(Ben-Chetrit etal., 1991; Itoh etal., 1991), the products c
genes CG30, PE38, the trypanosome L/I
etal., 1991 for refs) and the proteins
DrosophilaPosterior Sex Comb (psc) an Zeste [Su(Z)2] genes (Brunk etal., 19<
etal., 1991b).
Thehighestsirnilarityis found betweenI
itextends uptothe fusionboundarywith t] which constitutes the C-terminal part o
(Miki etal., 1991) (Figure 3b). All t
histidines of the second and third Cys conserved between Myl and T18 with
Cys2 13, indicating the functional
imp
residues which may be required for coord in zinc finger-like structures (see Berg, 1' 1991 for reviews). Myl and T18 alsodisi
their third cysteine-rich cluster with
R4
RPT-1, where most of the cysteine and
are conserved (Figure 3c). (Note that R
RPT-1 contain only two cysteine/histidii
551
Immediately C-terminal totheMyl cysteine clusters isa I R region (amino acids 229-360, boxed in Figure 1) which is predicted to be mostly oa-helical (Garnier etal., 1978;lZI
Gascuel and Golmard, 1988). Thisregion
wascompared
with the data bank and most of the similarities were found inprotein regions which are known to form a coiled coil
structure(CohenandParry, 1986). Theseproteinsincluded myosins, keratins, dystrophin, ae-actinin, flagellin, kinesin
heavy chain,
neurofilamenttriplet
Lprotein,
theDrosophila
glued protein, tropomyosin, laminin-B2,spectrin, andFos,
lusters
DCoiled
Cdl Fra-1 and Fra-2 in their leucine zippers. This region of Myl contains stretches in which hydrophobic amino acidsoccurand thetransforming at every seventh position (circled in Figure 1), with the
presentation
of frequent presence of a hydrophobic amino acid at the fourth played. Points ofposition (underlined
in
Figure1). Interestingly, theseheptadrepeats are conserved between Myl, T18, RFP, RO-52K and RPT-1 (Figure 3b and c). Wenotealso that theregion which 8 isatransforming is immediately C-terminal to thecysteinecluster in RPT-1 teincontaining this has been reported to have a high probability offorming a
o-oncogene [Miki coiled coil (Lupas et al., 1991). Interestingly, the spacing notcharacterized) between the different stretches of heptad repeats has also
N4-terminal part of been conserved between the five proteins (Figure 3c). MT]. Human RFP Therefore, Myl,T18WT, RFP,RO-52K and RPT-1 define ansforming protein anovel proteinfamily. NotethatRFP,RO-52Kand RPT-l cation (Takahashi are more related to each other (see Chan etal., 1991 for lative of MEL-18) an alignment) than to Myl orTi8WT. Since T18, RFP-Ret velopment (Haupt andpossiblyMylRAR are transforming fusion proteins, these a). Other proteins proteins may represent a newfamilyofpotentiallyoncogenic ivolved in control proteins. Interestingly, MylRARs, T18 and RFP-Ret retain
stheexpressionof the cysteine/histidine rich motifs and either the entirely the herpessimplex (MylRARs and RFP-ret) or alargepart of the coiled coil ?O (a regulator of (possibly T18; note that the T18WT sequence C-terminal Xrstein, 1987), and ofthe fusion point is not known) (see Figure 4). These
lavidsonandScott, structural similarities suggest that the presence of these ,ression of several domains maybeimportant for thetransforming potentialof rpal and Ostrove, the fused proteins.
also Radl8 which Other interesting structural features of the Myl protein JV-damagedDNA correspond to the presence of a proline-rich N-terminus(of
odedbytheV(D)J which a portion is deleted in theMyll isoform,seeFigures
etal., 1989), the 1 and 2a) and of a C-terminusofmarked acidic character
2K)ribonucleopro- and richinserines,amongwhichseveralarepotentialtargets puserythematosus for phosphorylation by casein kinase II (note that this
C-1988;Chanetal., terminal domain is not present in the MylRAR fusions).
Af the baculovirus Rproteins (Haupt , encoded by the Id Suppressor-2 of
91; van Lohuizen Myl and TI8, since he B-Raf sequence
Ifthe T18 protein
the cysteines and
s/His clusters are
the exception of bortance of these
linatingmetal ions
990; Valleeetal.,
Play
similarities in 0-52K, RFP and histidine residues FP, RO-52K and ne clusters.)Localization ofMyl, MyIRARand RARMyl
Theintracellular localization of Myl, MylRAR and RARMyl wasanalyzedby immunofluorescenceperformedonCos-1 cellstransfected with thecorresponding expressionvectors.
We also usedMyl(F),anepitope-tagged Myl,which consists ofMyltowhich theFregionof the estrogen receptor (ER) isC-terminallyfused(theER Fregiondoesnotpossess any nuclear targeting properties, unpublished results from our
laboratory). BothMylandMyl(F)weremostlynuclear,but
somestainingwasalsoseenin thecytoplasm of -80% of the transfected cells. Characteristicallyboth proteins were
excluded from the nucleolus and concentrated in discrete speckles within the nucleus (Figure 5; panels 2 and 3).
Myl(F)bearingamutation in thecysteine-richmotif of Myl
(Gln59 Cys6O - Glu59 Leu6O; Myl(F)m in Figure 5,
panel 7),aswellasN-terminallytruncatedMylandMyl(F),
starting at Met312, were localized exclusively within the nucleus in most transfected cells, had lost their speckled pattern, and were more uniformiy distributed (Figure 5,
.~~~~
.I fJ t,,._Myl MyIRAR proteins k~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~AkAs: I_At. IA
-12
IA,; 2A 4t=42 b A F. V1_nA-A-- e 1 8 44 -:1- -:-A-,U..
AD)3
U,
n.j
-Eu
G
A-MY- MV-A-Ak 2,Iy v22 IV M1YAILRA -B 23 24Fig. 5. Localization ofRAR-a, Myl, MyiRARand RARMyl. Expression vectors encoding eitherRAR-ri (panels 1, 6, 15 and 16), Myl (panel 2),
the epitope-tagged Myl(F) (panels 3, 15-24), MylRAR-A (panels 4, 10, 11, 17, 18, 21 and 22),MylRAR-B (panels 5, 12, 13, 14, 19, 20, 23 and
24), Myl(F)m (panel 7), MylRAR-A(m) (panel 8)orRARMyl-A (panel 9) were transfected inCos-l cells, and thecorrespondingproteins were
revealed by immunofluorescence after 24h. In allcases the upper panel shows nuclei oftransfected anduntransfected cellsrevealedby Hoechst
DNA staining andthe lower panel correspondsto theimmunodetection. In panels 1 -14, cells have been transfected with 1Agofexpression vector,
as indicated. Noqualitative differences in the intracellular distribution pattern wasobserved whencells were transfectedwith loweramountsof vector
(1-100ng). Inpanels 15-24, cells have been transfected with 100ng ofMyl(F)and 1 ,g of either RAR-ce, MylRAR-AorMylRAR-B, as
indicated.
panel 7, and data not shown). It is likely that Myl
con-tains a nuclear localization signal (NLS) (Silver, 1991)
located in the C-terminal portion of the protein. The
KRKCSQTQCPRKVIK basic sequence (amino acids
476-490) isapossible candidate. From the uniform nuclear
distributionoftheMyl(F)m molecule,weconclude that the cysteine-rich motif is required for the speckled distibution of Myl.
In contrast to
RAR-ca
localization whichwasexclusively nuclear and finely dispersed in all of the transfected cells(Figure 5, panels 1 and 6). MylRAR-A and MylRAR-B staining was localized both in the cytoplasm and in the
nucleus, although occasionally it was only nuclear (in
10-20% ofthe cells in thecaseof
MylRAR-A
andin <5 % in thecaseofMylRAR-B) (Figure 5, panels4 and5). Thegranular MylRARnuclear distribution wasclearly different from that of Myl. MylRAR-Abearingamutationin the Myl
cysteine-rich region (Gln59 Cys6O - Glu59 Leu6O;
MylRAR-Amin Figure 5, panel8),aswellasN-terminally truncatedMylRAR-A startingatMet312 (notshown), were
exclusively nuclear and more uniformly distributed, indicatingthatthe Myl N-terminal region may modulate the nuclear translocation of MylRAR-A and its granular distribution. Interestingly, the addition of RA resulted
in an increased and more uniform nuclear localization of
MylRAR-AandMylRAR-B accompanied byaperinuclear accumulationof theproteins (Figure 5,panels 10-14).Note
that, both in theabsenceandpresence ofRA, MylRAR-A
was'more nuclear' than MylRAR-B, possibly reflectingthe
presence in MylRAR-A ofboth Myl and RAR NLS. RA had no effect on RAR-ca localization (not shown).
The localization of the 'reciprocal' protein RARMyl-A
wasanalyzedwith anantibody directed againsttheAl region
ofRAR-ct. In all of the transfected cells. RARMyl-Awas
essentially nuclear with a granular distribution (Figure 5, panel 9). Given its smallsize, RARMyl-Aislikelytodiffuse freely into the nucleus where it may be retained by binding
to nuclear components.
Functional differences between MyIRARs and RAR-a
Transcriptional activation bythedifferent MylRAR proteins
was studied in either HeLacells orCos-1 cells transiently cotransfected (in the presence or absence of RA) with a
reporter plasmid containing the chloramphenicol acetyl transferase (CAT) geneunder thecontrolof aRA-responsive
promoter, and anexpressionvectorencoding either human RAR-a1 (hRAR-ca1), hRAR-ca deleted for region A
[hRAR(A)] or aMylRAR fusion. The parental expression MVY
6
M_,PA .E ox
U
P.Kastner et al.
M:.
Fig.6.Transcriptional properties ofMyiRARson RAtarget genes. (a)-(e): HeLacells (leftpanels) orCos-I cells (right panels) weretransfected withpTL2 (lanes and8), hRAR-al (Brand etal., 1988) (lanes2 and9), hRAR(zAA) (lanes 3 and 0), MylRAR-A (lanes4 and 1), MylI1RAR-A
(lanes5 and 12), Myl2RAR-A(lanes 6and 13) andMylRAR-B (lanes 7and 14), togetherwith the following RA-responsive promoter/CATreporter genes. (a) synthetic (TRE3)3-tk-CAT (Zelentetal., 1989), (b) mouse RAR-cx2 promoter[mRAR-at2/CATI (Leroy etal., 1991)], (c) mouseRAR-f32
promoter[mRAR-032/CAT (Mendelsohnetal., 1991; Smith etal., 1991)], (d)mousecellular retinol binding protein Ipromoter[mCRBPI/CATI (Smithetat., 1991)], (e) mousecellular retinoic acidbinding protein promoter (mCRABPII/CATI, B.Durand andP.Chamnbon, inpreparation).
Black bars represent basal levelsinthe absence ofRA, andhatched bars induced levels inthepresence of 10-6MRA. (f) and(g): repressionofthe basal promoteractivity of different reportergenes by MylRAR-Aand MyIRAR-Bin HeLa and Cos-1 cells, respectively. The bars represent the CAT
activityobserved in the absence of RA when eitherm.RAR-oa2/CATl, (TRE3)3-TK-CAT, mCRBPI/CATI, mCRABPII/CATI weretransfected with eitherpTL2 (control), hRAR-cal, MylRAR-AorMylRAR-B, asindicated.
vectorpTL2(Greenetal., 1988,and Material andmethods)
was used in control experiments in which RA-induced
expressionwasduetoRARsendogenoustoHeLaand Cos-1
cells. The reporter plasmids were either
(TRE3)3-tk-CAT
(Zelent etal., 1989) which contains a synthetic RARE,
mRAR-a2/CATl
(Leroy etal., 1991),mRAR-g2/CAT
(Smith etal., 1991; Mendelsohn etal.,
1991),mCRBPI/CAT1 (Smithetal., 1991)andmCRABPII/CAT1
(B.Durand and P.Chambon in preparation) which correspond
to natural RA responsive promoters.
Cotransfections of either MylRAR-A, Myl1RAR-A, Myl2RAR-A or MylRAR-B had comparable effects on a
givenreportergene,both in theabsenceorin thepresence
of RA. However, the magnitude of the response varied
widely, dependingonboth thereporter gene promoter and
IF_ ..-. A B C D E- F A B A 'P -u-- rh Abe3F3 LE M.-*,.i. 0 y;HRAR-B ---e RPWY., F) Myl224RAR-B -IMyl273RAR-B RAR-u I
4lk-S
:7- . ii. Z:. r. :-,I"'..-!. . I . j". 0 z- k - F-- #-. r. -%- " 1. , !.., -...7I..". .-;Fig. 7. Coimmunoprecipitation of Myl and MyIRAR-B. Extracts A-Farefrom Cos-I cells that have cotransfected with Myl(F) (Myl taggedwith
theER Fregion) and either MylRAR-B (extracts A andB), hRAR-al (extracts C andD). Myl224RAR-B (extract E)or Myl273RAR-B (extractF). Cells usedforpreparationof extracts B and D have been grown in the presence of 10-6 M RA. Extractswereimmunoprecipitated with the anti-ER F regionAb(F3) monoclonal antibodyor anon-reactive ascite fluid (NRA), asindicated. Immunoprecipitates wereloadedontwo SDSgelswhich were revealed withAb(F3) (upperpanel)ortheanti-RAR-cs F regionpolyclonalantibody RPa(F)(lower panel). 5 tl ofeach cellextract(1/200of
the material used for immunoprecipitation) was loadedin lanes 1-6.Extracts in lanes9and 10have been boiledfor 15min priorto
immunoprecipitation. Starts pointtoimmunoglobulinspresent intheimmunoprecipitatedsamples.
6a-e), (TRE3)3-tk-CAT and mCRBPI/CATl expressions
were stimulated to similar extent by hRAR-cx1 and
MylRARs, whereas MylRARs were less efficient than
hRAR-ol at stimulating the mRAR-a2/CAT reporter. In contrast, MylRARs (particularly MylRAR-A) were more
efficient than hRAR-a1 at activating mCRABPII/CATl expression. Inthecaseof mRAR-,B2/CAT, hRAR-al and
MylRARsactivatedsimilarlyin HeLacells,whereas
hRAR-alI was moreefficient than MylRARs in
Cos-l
cells. Theapparent affinity ofMylRARs for RA was similar tothat ofhRAR-xl1, with in both cases ED50 of -5 x
10-9
Mfor the stimulation of the CRABPII promoter (data not
shown).
Interestingly, in the absence of RA, MylRARs had a
repressive effectonthe basal activity of certainreporter gene promoters, underconditionswherehRAR-a1 cotransfection
resultedinno ormuch less repression (Figure 6f-g). This
differential repression wasparticularly clear in thecaseof
themRAR-a2and mCRBPIreporter gene promoters(Figure
6fand g). Note that in allcaseshRAR-o1 andhRAR(AA) had similareffects, which indicates that thepromoter- and
cell-specific differences between hRAR-a1 and MylRAR activation andrepression functionsareduetothe presence
ofthe Myl sequence in MylRARs.
Since the reciprocal translocation product, RARMyl, containsaMyl regionrich in acidic amino acids (see above andFigures 1 and2a),wetested whether RARMyl-A could
squelchtheactivityoftwoacidic activators in cotransfection
experimentssimilartothose reported byTassetetal. (1990).
No effect was found on Gal4 or Gal-VP16 activated
transcription, norcould RARMyl-A interfere with
hRAR-a1-mediated gene activation (data not shown).
Association between Myland MyIRAR
Since Myl contains a putative coiled coil structure (see
above), we tested wheter Myl derivatives could associate. Cos-1cellsweretransientlycotransfected either withvectors
expressing the epitope-tagged Myl(F) andMylRAR-B, or
Myl(F)and
hRAR-al
vectors.Extracts wereprepared from both sets of transfected cells and subjected toimmuno-precipitation with either the Ab(F3) monoclonal antibody specific for the ER(F)tag, or acontrolascitic fluid. Immuno-precipitates werethen separatedbyelectrophoresis ontwo
identical gels whichwereanalyzed by Western blotting with Ab(F3) and an anti-RARa-F region polyclonal antibody [RPa(F)]. Myl(F) and MylRAR-B, but not Myl(F) and
hRAR-at 1,coimmunoprecipitated (Figure 7, lanes 7-8and 11-12). A similar coimmunoprecipitation was observed whenthe cellswere grown in thepresence ofRA (Figure 7, lane 8). This coimmunoprecipitation was not observed when the cellextract wasboiledpriortoimmunoprecipitation (Figure 7, lanes 9 and 10)nor was it observed between the
ER and MylRAR-B (not shown), excluding potential
antibodyartefact. Similar resultswereobtained with invitro
cotranslated MylRAR-A and Myl(F) (datanotshown). Thus, theformation ofMyl(F)/MylRARcomplexes suggeststhat Myl and MylRAR may actually form homo- and
heterodimers in solution. We tested the ability oftwo
N-terminallytruncated MylRAR-B moleculestoassociate with
Myl(F). Myl224RAR-BismissingallsequencesN-terminal
to Glu224 (which include the cysteine clusters) and Myl273RAR-B is missing all sequences N-terminal to
Ala273(missingthecysteine clustersandpartof the putative coiled coil). Myl224RAR-B, but not Myl273RAR-B,
coimmunoprecipitatedwith Myl(F) (Figure 7, lanes 13 and 14). Thus the conserved cysteine-rich regions are not
involved in Myl/MylRAR association, whereas the coiled coilregionisrequired,mostprobably byprovidingasurface for dimerization. In a similar experiment, no coimmuno-precipitation could be observed betwen MylRARs and an
epitope-tagged RAR-a (notshown), indicatingthat, although
aputative dimerization interface has been proposedtoexist in RAR-a (Forman and Samuels, 1990), this domain does
not allow formation of stable RAR-a/MylRAR dimers in solution.
Toshowthe Myl/MylRAR complexesareformed within
cells, Cos-1 cells were cotransfected with Myl(F) and
MylRAR, or Myl(F) and hRAR-a1, andthe intracellular localization ofMyl(F)wasinvestigated. When cotransfected with hRAR-a 1, Myl(F) exhibited the expected Mylpattern
AMIMLAML-wmA.Mo. AilliolowAmb.00.
P.Kastneretal.
11
I
Fig. 8. Colocalization of Myl and MylRAR-B, Cos-l cells cotransfected with Myl (1 Ag)andhRAR-cal (100ng) (a), Myl (100ng)and MylRAR-B (1 ytg)(b) and MylRAR-A (1Ag)and hRAR-al (100ng) (c) were subjectedtodoubleimmunofluorescence with the anti MylRP(Myl)-I polyclonal antibody, detecting Myl and MylRAR-A, butnot MylRAR-B, theAb(9c)F monoclonal antibody detecting hRAR-al and MylRAR-Bin (a) and (b), andAblOal(A1), detecting hRAR-al in (c). Top panels shows the DNAHoechststaining, middle panels theRARa orMyIRAR-Blocalization and lower panels the Myl orMylRAR-A localization, asindicated.
(Figure5, panel 15). In contrast, whencotransfectedwith
MylRAR-A or-B, Myl(F) displayed the typicalpattern of MylRAR both inthe absence (compare panels 17 and 19 with panels 18 and 20 in Figure
5)
or presence of RA (comparepanels21 and 23 withpanels22 and 24 inFigure5). To support further thecolocalizationof coexpressedMyl
and MylRAR, cells were transfected witheither Myl and
MylRAR-B or Myl and hRAR-a1 andthe distribution of
Myl, MylRAR-B orhRAR-a1 wererevealed in the same
cells bydoublelabellingimmunofluorescence. Asexpected, coexpression of Myl andhRAR-a1 did not perturb either Myl or hRAR-a normal localizations (Figure 8a). In contrast, when coexpressed with MylRAR-B, Myl adopted the exact MylRAR-B localization pattern (Figure 8b). Therefore, Myl is likely to be associated with MylRARs
withinthe cell,and thisassociationappearstointerferewith its 'normal' intracellular localization. In similar double labelling immunofluorescence experiments, transfection of
MylRAR-Ain excess[revealedspecificallywith
RP(Myl)-1]
together with hRAR-al [revealed withAblOal(Al),
directed against the RAR-ct1 Al region] did not altersignificantlythe nuclear localization of RAR-al (Figure 8c),
further indicating that MylRARs and RAR-a1 do not
associate.
Discussion
We reporthere the molecularcharacterizationof twoclasses (A andB) ofreciprocalRNAtranscriptsandproteinswhich result from the chromosomal
t(15;
17)translocation specificto APL. In both casesthe breakpoint in theRAR-a gene is located in the intronseparatingtheexonencodingregion
Bfrommoreupstreamregions which contain the two
RAR-ca
gene promoters and themultipleexonsencoding the different
5'-UTRs and A regions of the various
RAR-at
isoforms (Brand etal., 1990; Leroy et al., 1991; P.Leroy andP.Chambon,unpublished results). In contrast, there are two classes ofbreakpointsinthe Myl gene, resulting in MylRAR-A and B fusion transcripts and proteins, and in the
corresponding RARMyl-A and B reciprocal counterparts.
Theexistence of these two A and B classes is in agreement with previous reports, which showed that there are two
different size classes of abnormal RAR-ct transcripts in APL patients (Longoetal., 1990; Warrel et al., 1991). Note that we detected only one class oftranscripts (either A orB) in anygivenpatient, thus confirming the clonal origin of the APL tumoral cells. The PCR assay that we used here offers a sensitive and reliable assay to discriminate between the twot(15; 17) translocation classes, thus making possiblean
investigationintowhetherAand Bpatientsrespond similarly to RA treatment.
Mylcontains acysteine-rich motif which is shared by a newly identified group ofproteins, ofwhich some appear toexertregulatoryfunctionsinthe nucleus. The occurrence of this motif, in species as distant from human as yeast and trypanosome (seeHauptetal., 1991 forrefs),suggests that it couldperformanevolutionarilyconservedfunction. It may possibly form a new zinc-coordinated finger structure(Berg, 1990; Vallee etal., 1991), which could correspond to a novel class of DNA (or RNA)bindingmotif. Two additional cysteine-rich motifs are present in the N-terminalregionof Myl which also appear to beevolutionarilyconserved (see
Figure 3). Immediately C-terminal to these cysteine-rich motifs, Mylcontains aregionwhich islikelytoform a coiled coil. In agreement with the existence of this structure, we have shown that Myl can form a complex with MylRAR (presumably as aheterodimer)andthat the Myl coiled coil is requiredfor this association. In addition, Myl contains a proline-rich region, as well as an acidic region, both of which have been found in the activating domains of some
transcriptionfactors(MitchellandTjian, 1989).The overall N-terminalstructure(putativeZnfingers followedby a coiled
coil, see Figure 3) has been conserved between Myl,
T18WT, RFP, theputative transcription factor RPT-1 and the 52 kDa component of the RO/SSA ribonucleoprotein particle. These proteins define a novel protein family, and
Myl
theseproteins represent a newclass ofproteins whichmay be involved in cell transformation.
Could Myl beatranscription factor?This idea is supported byitssimilarities with other proteins (e.g. ICPO) and RPT-1)
which possess regulatory functions and could be transcription
factors, andby the presence of both putative DNAbinding
and activating domains within the Myl sequence. The possible presence of an activation function in the Myl portion present inMylRARs is supported by the strong activation of the CRABPII promoter by MylRARs, but neither by
RAR-oa nor by RAR-a deleted for the A region. Note, however, that we did not observe any stimulation ofGal4
reporter genes transfected into
Cos-1
cells together with a vector expressing the entire Myl protein fused to the Gal4 DNAbinding domain (Tora et al., 1989; our unpublished results). On the other hand, the speckled nuclear distribution of Myl aswellasits similarity with the RO-52K protein may be more consistent with a role of Myl as a component ofribonucleoproteincomplexes. In this respect, it is noteworthy that (i) two proteins of the same group, ICPO and the RO/SSA 52 kDa ribonucleoprotein, have been reported to
display speckled nuclear localizations (Gelman and
Silverstein, 1987; Ben-Chetritetal., 1988); (ii) the mutation of two residues in the conserved cysteine-rich motif is
sufficientforabolishingthe speckled appearance and making Myl fully nuclear. Spliceosomes have also been shown to exhibit a speckled nuclear distribution (Fu and Maniatis,
1990; Carmo-Fonsecaetal., 1991; Gall, 1991). However, we notethat thespliceosome-specificantibody SC35 (Fu and
Maniatis, 1990) does not label the Myl speckles (our unpublished results).
Irrespectiveof the actual function ofMyl, there is little doubt that its fusionproducts with
RAR-oa
areresponsible for the lack ofdifferentiation ofpromyelocytes, which istightly correlated with the t(15;17) translocation and the expression of abnormal RAR transcripts in APL (Longo
etal., 1990;Warrel etal., 1991).Inthis respect it is striking
that the portion of Myl which is fused with RAR in
MylRARs contains a cysteine-rich and coiled coil motifs
which arealso found inthe N-terminal moiety of the two
oncogenic fusion proteins T18 and RFP-ret (see above).
Althoughit cannot beexcludedthatthereciprocal RARMyl fusion products could be partially responsible for the block ofpromyelocyte differentiation in APLs, we will restrict below our discussion to the possible role ofMylRARs in
this blocksinceit is relievedbyRA treatment. Any model aimedatexplainingtheeffects ofMylRARsonpromyelocyte
differentiation must ultimately account for two facts: (i) normal Myland RAR-a are apparently synthesized by the
non-translocated allele genes in APL cells; (ii)
supra-physiological RA concentrations are required in the blood
ofAPLpatientstoresultin remission (Warrel et al., 1991).
Ifone assumes that Myl and/or RAR are involved in the controlof normalmyelocyte differentiation, it follows that
MylRARs
mustnotonly be unabletoperformthe functions ofMylandRAR-ca,
butalsoact astrans-dominantinhibitors ofthesefunctions; furthermore increased concentrations ofRA would be required to relieve this negative
trans-dominance.
Twomechanisms can be considered. Firstly, MylRARs
could interfere with a normal physiological control of expression of RA-responsive genes, which may be crucial fordifferentiation ofpromyelocytesto granulocytes. Note in this respect thatRAis knowntoinducethe differentiation
of several non-acute promyelocytic leukemia cell lines
(LubbertandKoeffler, 1988). MylRARappearstobe
pre-sent atmuch higherlevels than wild type RAR-a inAPL cells (see Figure 2c), and therefore its effects are likelyto
be dominant to those of RAR-a. We haveshown, aswell
asothers
(de
Theetal., 1991;Kakizukaetal., 1991;Figure
6)
that MylRAR-A and MylRAR-B have similartrans-activating propertieswhichcandiffermarkedlyfrom those ofRAR-a1. These differences betweenMylRARsand RARs may be due to the presence in MylRAR of the Myl
dimerization interface and probable MylRAR homodimers may have different DNAbinding/transactivating properties
than RAR-a, which does not homodimerize efficiently and
requiresanadditional nuclear factor to bind to RAREs(Leid
etal., 1992). Interestingly, MylRARs can repress the basal activity of some RA target gene promoters in the absence of RA, whereas the same promoters are transactivated in the presence of RA (Figure 6). It is possible that the actual level of RA is too low in the blood of APL patients to
ac-tivate MylRARs which would then act as repressors. Increas-ing the RA concentration in APL patients could be necessary to convertMylRARs into RAR-like activators, and also to improve their transfer into thenucleus, assuggestedby the results shown in Figure 5. In other words, at RA
physiological concentrations, the repressive effect of MylRARs woulddominate,andsupra-physiologicalRA con-centrations would be necessary to convert MyiRARs into activators of RA target genes. In this respect, we note that the basal activity of the RAR-az2 promoter is particularly sensitive to MylRAR repression. Whetherexpressionof this RA-inducible RAR-a isoform is required for the expression of RA target genespossibly involvedinpromyelocyte
dif-ferentiation, remains to be seen.
On the other hand, RA may not be required for the
physiological differentiationofpromyelocytes, whichwould bedependentonMyl,whose function would be trans-domin-antlyrepressed by MylRARs in APL. Thisnegativeeffect could result from the formation of inactive and inappropri-ately located Myl/MylRARcomplexes (possibly heterodi-mers) unable toperformthe normal function ofMyldimers. If Myl isatranscription factor, Myl/MylRARheterodimers might be unable totransactivateMyl target genes because a Myl activation function (perhaps corresponding to the acidicMylC-terminalregion)may belackinginMylRARs.
This defect would then be compensated whentheactivation function in the RAbindingdomain present inMylRARs is activated by RA.
Inconclusion, althoughwehave characterized the products
resulting from the APLtranslocation, the present study of their functionalpropertiesdoesnotleadto aclearcut model
accounting for the remarkable efficiency of RA in the treatmentof APL patients. It cannotbeexcluded also that the fusion productsbyMyl andRARcouldblockmyelocyte
differentiation ofmodulating the activity of genes whose
expressionisnotnormallycontrolledbyMyland/or RAR-a.
Elucidatingthephysiological function ofMylisanobvious
prerequisitetofurther progress in theunderstanding ofthe molecular mechanisms leading to altered myelocyte
differentiation in APL. That Myl may perform important
functions is strongly suggestedby its structural similarities witha newgroup ofproteins,of whichsomehaveoncogenic properties when fused with -other proteins.
Three studies reporting the characterization ofMyl and
P.Kastneret al.
completion
of the present report (de The et al., 1991; Kakizuka etal., 1991; Pandolfi et al., 1991).The fusiontranscript
identified by both Pandolfi et al. (1991) and deThe etal. (1991) is identical to MylRAR-A, whereas
Kakizuka etal. (1991) have isolated a fusion transcript
identicaltoMylRAR-B.Itis interestingto note that our Myl sequenceisdifferent from those reported by all three groups, whicharethemselves differentfrom each other. In all cases the
reported
Myl sequences are identical at least up to thepoint
offusion with RAR-a sequence in MylRAR-A (Mylamino acid 552). Inthe case of Kakizuka et al. (1991), the
divergence
whichstarts at amino acid 553 is due to an 8 bpinsertion which may correspond to a mini-intron. The
divergence
withthe de The et al. (1991) andPandolfiet al.(1991)
Mylsequence (which are different from each other)occursatnucleotide 1851 (amino acid 570) and is likely to
correspond
to a splice junction. The significance of thesedifferences which may reflect a complex pattern of
alternative splicing in the C-terminal region of Myl is
unknown.
Materials
and
methods
Cloningof cDNAs andPCRdetection of MyIRAR and RARmyl MylcDNAswereclonedasfollows. Athree step anchored PCR walk was performedonNB4 cDNA toisolateMylcDNAsequences upstream of the
fusionpointwithRAR-cr. Typically,5yg of total NB4 RNA (Lanotte etal., 1991) wasreversetranscribed with aspecificRAR-caregion B anti-sense
oligonucleotideand theresultingcDNA dG-tailed. Two rounds of anchored
PCRwerethenperformedwithtwo nested 3' primers, as described (Loh
etal., 1989;Kastneretal., 1990; Zelentet al., 1991). Thefirstand second
anchored PCR stepsyielded sequences up to nucleotides 969 and 279, respectively (see Figure 1). The 3' Mylsequences have been cloned by
PCRusingtwonestedMyl primers (nucleotides 1712-1731 and 1742-1762,respectively)andoligo(dT)-containingprimers, as described (Frohman
and Martin, 1991).All sequences have been determined on at leastthree independentclones. PCR analysis ofMylRAR and RARMyl transcripts was
carriedoutasfollows:5 MgtotalRNA was reverse-transcribed with either aRAR-cx Cregionantisenseoligonucleotide primer(MyIRAR
amplifica-tion)and withanoligo(dT)-containing primer(RARMyl amplification). One
tenth ofthereversetranscription reactionwas employed for PCR. 35 cycles
of PCRwereperformed(1 min at94° C,2min at60° C, 3 min at72° C) with 100pmolof eachprimerin a buffer containing 10 mM Tris-HCI pH 8.8,1mMMgCl2,50 mMKCI, 200 Mg/ml BSA and 100 MMdNTPs. Primer sequences were: Ml, 5'-GAGCTGCTGGAGGCTGTGGA;
M2, 5'-TCTTCCGAGCTGCTGATCAC; RI,
5'-GCCCACCAGAGG-CCCCCTGC: R2, 5'-AAAGCAAGGCTTGTAGATGC. Plasmid constructions
MylRAR-A (see Figures1 and 2a)expression vectorwas constructed from
threefragmentsproducedby restriction digestionofPCR-amplifiedproducts: BglH-KpnI(nucleotides 107-1056).KpnI-SacH(nucleotides 1057-1864)
and SaJll-EcoRI (nucleotides 1864-3009). Note that EcoRI and SacII arenewsitescreatedbyPCR; the creationofSac1 site in the RAR B region
changesthesequenceCCCCGC intoCCGCGG(nucleotides 470-475 in
Petkovichetal., 1987, encoding ProArg)and the EcoRI site is located just
downstream ofthe RAR-a stop codon (TGAATTC). These fragments
wereligatedtogetherinto thepTL2 expression vector(a gift of Tom Lufkin) between the BglII and EcoRI sites. pTL2 is identical to pSG5 (Green etal., 1988), but possesses a BglII-KpnI-SacI-PstI-SmaI
-NotI-HindIHl-BamHI-EcoRIpolylinkeras cloning sites. The resulting
plasmid (MylRAR-Ao)waslinearizedwithBglIIand the 1065'-terminal Myl nucleotideswere inserted as a BgllI fragment (obtained by PCR)
generating MyIRAR-A.BothMylRAR-AoandMylRAR-Agenerated the
same 120and 110 kDaproteinswithsimilar efficiency when transfected
into COS-1 cells (not shown). MyllRAR-A(see Figures 1 and 2a) expression
vectorwasmade by replacingtheBglII-KpnI fragmentof
MylRAR-AO
with thecorrespondingfragment of Myl 1obtainedby PCR from NB4 cell RNA.Myl2RAR-A(see Figures1 and 2a)expressionvector was obtained by replacing the KpnI-SacII fragment of MylRAR-A< with the correspondingMyl2RAR-Afragmentwhich wasobtainedby PCR performed on NB4cell RNA. MylRAR-B(see Figures 1 and 2a)expressionvectorwasgeneratedby replacement of the KpnI-SacII fragmentof
MylRAR-Arkwith thecorrespondingfragmentobtainedbyPCR from classBpatient RNA.TheMyl expressionvector wasmadeby insertingtheMyl106-2058 nucleotidesequence (seeFigure 1)between the
BglII
and EcoRI sites ofpTL2. Myl(F) expressionvector wasconstructedby insertingbetweenBgIH
andEcoRI ofpTL2,theMyl 106-2040sequencefusedwith the Fregion
of the humanestrogen receptor(nucleotides 1869-2020,Greenet
al.,
1986).A XbaI site was created at the Myl-ER junction with the nucleotide
sequence being CTAATTCCTTCTAGAACTAGC, which encodes L-T-P-S-R-T-S. Note that a proline residue has been introduced to
allowforflexibilitybetween Myl and ERsequences.TheQ59C60-E59L60
mutationpresentin Myl(F)m and MylRAR-A(m)vectors wascreated by
site-directed mutagenesis changingCAATGC(nucleotides 316-321; see Figure 1)into GAATTC and thuscreatinganEcoRIsite. RARMyl-Avector was constructedby subcloning into theEcoRI site ofpSG5 thefragment
obtained by PCR from NB4 cDNA with the primer pair 5'-ATGAATTCCACCATGGCCAGCAACAGCAGCT and
5'-ATGAATTCTTTGGGACTCAGAGACTAAA. hRAR(AA) expression
vector wasconstructedbyPCRamplificationof thesequenceencoding the
B-FregionsofhRAR-cs,andsubcloningintoKpnI-EcoRIsites ofpTL2.
Amplification wasperformed onMyIRAR-Awith the 5' oligonucleotide
5'-ATGGTACCACCATGGCCATTGAGACCCAGAGCAG and the 3' oligonucleotide5'-ATGAATTCACGGGGAGTGGGTGGC.
Myl224RAR-BandMyl273RAR-B were madebydeleting in MylRAR-B nucleotides
upstreamofnucleotide 811 and nucleotide 958 (Figure 1), respectively. Theresulting inserts arecloned between BglIIand EcoRI sites in pTL2
and their 5'sequencesareAGATCTCCACCATGGAGCTC. . ., encoding MetGluLeu. . (Myl224RAR-B) and AGATCTCCACCATG
GCCGAG.... encoding MetAlaGly ... (Myl273RAR-B). All cloned
fragmentswhich have been obtained by PCR have beenresequenced. Antibodies, immunofluorescence, immunoprecipitation and Western blotting
RP(Myl)-1 wasraised against the syntheticpeptideCPRKVTKMEGEEGKE (underlined by dashes in Figure 1), which was coupledtoovalbuminvia thecysteineresidueasdescribed(Rochette-Eglyet
al.,
1991). Immunization of rabbits and antiserum preparationwas as in Gaubetal.
(1989). The immuneserum wascharacterized byWesternblotandimmunofluorescence analysis oncloned Myl, Myl(F)andMylRAR-A. Other antibodies used in this studywere: Ab9ca(F), amonoclonal antibody directed againsttheF region of RAR-a (Gaub,M.P., Rochette-Egly,C., Lutz,Y., Ali,S., Matthes,H., Schever,I. and Chambon,P., in preparation), which detects RAR-cal, MylRAR-A, MylRAR-B and MylRAR-A(m); AblOail(Al), a
monoclonalantibodydirectedagainstthe Al region ofhRAR-crl (M.P.Gaub,
in preparation) which detects hRAR-a I and
RARMyl-A;
Ab(F3), amonoclonal antibodydirected againstthe Fregion of the humanestrogen receptor(hER) (Metzger,D., Ali,S.,Lutz,Y., Bellocq,J.P.,in preparation) which detects Myl(F) and Myl(F)m.
Immunofluorescence(seeFigure5)wasperformedasfollows.Transfected Cos-I cells, cultured in Leighton tubes (Costar) in Dulbecco's medium supplemented with 5%delipidized fetal calfserum, wereprocessedfor the immunodetection essentially accordingtoLutzetal. (1988)exceptthatthe
methanol/acetone steps were omitted. Controlexperimentswhere the
fixation/
permeabilization procedurewasreplaced byamethanol/acetone procedure showed alsonomodification in the antigen distributionnordid the absence
orpresenceofthedetergentTritonX-100modify the observed localization. AntibodyRP(Myl)-lwasincubatedovernightat a1:500 dilutioninPBS. Hybridoma culturesupematantsofAblOa(A1),Ab9a(F)andAb(F3)were
used atdilutions of1:1, 1:10 and 1:200, respectively. The Texas Red conjugated second antibody (Jackson Immunoresearch Laboratories),was
incubated for 1 h and diluted 40 times for anti-rabbit antibody and 200times foranti-mouse antibody.Fordoublelabelling, MylandMylRAR-A[detected
withRP(Myl)-ldiluted at1:500] were revealed with Texas Redconjugated anti-rabbit IgGsecondantibody (JacksonImmunoresearchLaboratories) diluted40timesandMylRAR-BorRAR-ca[detected withAb9a(F)diluted
at1:10]wererevealed with fluoresceinconjugated anti-mouse IgG second
antibody (JacksonImmunoresearchLaboratories) diluted 10times.
Immunoprecipitationreactionswerecarried out as follows. Cos-1 cells (9cmpetri dishes) were transfected with 2 Mg of each expression vector, asindicatedinFigure7.Cells were washed with PBS and scraped in 1 ml perdishof RIPA buffer(10mMTris-HCI,pH 7.5, 120 mM NaCl,