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Structure, localization and transcriptional properties of two classes of retinoic acid receptor alpha fusion proteins in acute promyelocytic leukemia (APL): structural similarities with a new family of oncoproteins.

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Structure, localization and transcriptional properties of

two classes of retinoic acid receptor alpha fusion

proteins in acute promyelocytic leukemia (APL):

structural similarities with a new family of oncoproteins.

P Kastner, A. Perez, Y Lutz, C. Rochette-Egly, M Gaub, Beatrice Durand, M

Lanotte, R. Berger, P. Chambon

To cite this version:

(2)

Structure,

localization and

transcriptional properties

of

two

classes of retinoic acid receptor

a

fusion

proteins

in

acute

promyelocytic

leukemia

(APL):

structural similarities

with

a

new

family

of

oncoproteins

Philippe

Kastner1, Aymee

Perez',

Yves

Lutz,

Cecile

Rochette-Egly,

Marie-Pierre

Gaub,

Beatrice

Durand,

Michel

Lanotte2,

Roland

Berger2 and Pierre Chambon

Laboratoire deG6n&tique Moleculaire desEucaryotes, CNRS, Unite

184de BiologieMol6culaire etdeGenieGenetique, INSERM, Institut

de Chimie Biologique, Faculte deMedecine 11, rueHumann,67085

StrasbourgCedex, and 2Unit6 301 del'INSERM, SDI No 15954.1

CNRS, CentreHayem andIGM, and Laboratoire Central

d'Hematologie, H6pital Saint-Louis, Paris, France

'Shouldbe consideredasequal firstauthors

Communicatedby P.Chambon

Acute promyelocytic leukemia (APL) is due to a

chromosomal t(15;17) translocation which involves a

novel human gene, Myl, (also named PML) and the

retinoic acid (RA)receptora(RAR-a) gene. We report here the characterization of Myl and of the reciprocal MylRAR (PMLRAR) and RARMyI

(RARPML)

fusion transcripts which are found in two classes of APL

patients. Myldisplays similarities with a new

family

of proteins of which some members are fused to proto-oncogenesin the

transforming proteins

RFP-retand T18.

Thespeckled nuclear localization of Myl, aswell asits

sequence homology with the 52kDa component ofthe

RO/SSA ribonucleoprotein particle,suggest thatMylmay

be present ina ribonucleoprotein complex. Incontrast tobothMylandRAR-oe whoselocalizationisessentially

nuclear in the presenceorabsence ofRA,MylRAR which

is largely cytoplasmic in the absence ofRA appearsto

betranslocatedtothe nucleus inthepresenceofRA.

Myl

andMylRARcanassociatein vitro and this association ismediated byacoiled coil intheMylsequence. In vivo this association results in a colocalization of Myl and

MyIRAR

which is identical to that of MylRAR alone.

Studies of activation of

transcription

from thepromoters

of severalRA target genesindicate thatMylRARs have

altered

transcription activation properties when

compared with RAR-a. Most notably, MylRAR

repressses markedly the activity of some RA target promoters intheabsence ofRA. Western blotanalyses

ofpatient samplesshow that

MylRAR

isexpressedto a

much

higher

levelthanwildtype

RAR-a

originating

from

the normal allele. Taken together, these results suggest thatMylRARmay interfere inadominantmannerwith both Myl and RAR functions.

Key words: APL/coiledcoil/Myl (PML)/RAR-a/MylRAR

(PMLRAR) fusion/RARMyl (RARPML) fusion

Introduction

Chromosomal abnormalities arefrequently associated with

malignant diseases. In a number of instances, specific

chromosomal translocations have beencharacterized,which

generate fusion genes encoding proteins with oncogenic properties (Cleary, 1991; Sawyers etal., 1991).Aspecific

t(15;17) reciprocal translocation is the hallmark of human acutepromyelocytic leukemia (APL) (Rowley et al., 1977).

Thelocalizationofthe human retinoic acid receptora (RAR-a) gene in the region of chromosome 17 which is involved inthis translocation, led us to speculate that disruption of this gene may be related to APL etiology (Mattei et al.,

1988). It has been shown subsequently that the chromosome 17 breakpointliesinfact within the RAR-a gene (Borrow etal., 1990;deTheetal., 1990; Alcalayetal., 1991;Chen etal., 1991) andthat,in APL cells, transcripts are produced from a fusion between Myl, a novel gene on chromosome 15, and theRAR-ca gene (de The et al., 1990; Longo et al.,

1990; Warrel etal., 1991). This finding is especially interesting, since APL patients undergo complete remission after a few weeks of treatment with retinoic acid (Huang etal., 1988; Castaigne etal., 1990;Chomienneetal., 1989; Warrel et al., 1991; Clarkson, 1991, for review).

Retinoic acid (RA) is a vitamin Aderivativewhich exerts

profound effects on vertebrate development and on cell growth and differentiation (Brockes, 1989 for a review).

ThreeRAR genes,RAR-ce,,Band -yhavebeencharacterized

and ithas been shown that several RAR isoforms can be generated from each gene subtype(eithera, ,B or

"y)

by

dif-ferential use of two promoters and alternative splicing

(Giguereetal., 1987; Petkovich etal., 1987; Brand etal.,

1988; Zelent etal., 1989, 1991; Kastner et al., 1990; Leroy

etal., 1991). RARs belong to the superfamily of nuclear

steroid/thyroid hormone receptors which act as

ligand-inducible transcriptionfactors modulating the expression of target genes (Evans, 1988; Green and Chambon, 1988 for reviews). The amino acid sequence of RARs has been divid-edinto sixregions(A -F)basedondifferent degrees of

con-servation, with regions C and E being highly conserved

(Kastneretal., 1991, for review). Region C contains the zinc fingerDNA binding domain, whereas region E cor-responds to amultifunctional region containing both the RA

binding domain, aRA-inducible transcription activation func-tion and possibly an interface involved in protein-protein

interaction (Glassetal., 1990). Regions B, D and F are less

ornot conserved when comparing the three RAR subtypes within a given species, whereas they are highly conserved for a given subtype across species. Furthermore, the

N-terminal Aregion which is isoform specific is also conserv-edacross species for a given isoform of either RAR-a, ,B

or

-y.

These region A differences may correspond to cell-and promoter-specific transcriptional activation properties of the various RAR isoforms (S.Nagpal and P.Chambon, unpublished results). The possible functions of B, D and F

regions is unknown.

Wereport here thecloningofMyl and the characterization

of twosetsofMylRARand RARMyl transcripts and proteins thatoccurintwoclasses of APL patients. Structural features ofthe Myl protein, the intracellular localization of Myl,

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P.Kastner et al.

MyiRARand RARMyl, the transactivation properties of the

MyiRARchimeras on RA target genes, and the association between Myl andMylRAR, provide the basis for speculating on how these fusion proteins may be involved in APL

etiology.

Results

Cloning of Myl (PML) cDNA

The point of fusion in the Myl

-RAR-ca

transcript which was found in the APL-derived cell line NB4 (Lanotte et al.,

1991), is located at the splicing junction between the exons

encoding the A and B regions of

RAR-oa

(de The etal.,

1990;seeRAR-a in Figure 2). We first used anchored PCR to clone 1798 nucleotides of Myl 5' cDNA sequences corresponding to RNA sequences located upstream of the RAR-a B region in Myl -RAR RNA present in the NB4 cellline (Figure 1, sequence located upstream of the open

triangle designatedA). The 3' part of the Myl cDNA was clonedby PCRusing Myl-specific primers and

oligo(dT)-containingprimers. The total length of the cloned Myl cDNA is 2199bp (Figure 1 and data not shown), which may correspond to the smallest Myl transcript species detected on Northern blots (de The et al., 1990).

An open reading frame (ORF) conceptually encoding a

633aminoacid protein (calculated molecularweight 70 028

Daltons) is present in this Myl sequence (nucleotides 142-2040, Figure 1).Although the readingframe remains open up tothe 5' end of the cDNA, we could not isolate any further5'-extended cDNA byanchored PCR, and the present sequence maythereforecorrespond to a nearly full

lengthMyl cDNA. Furthermore, the similar size of cloned and endogenousMylRARproteins (see below) supports the ideathatthe present cDNA sequence is not missing the 5' end oftheMyl coding sequence, and hence, that the first AUG (nucleotides 142-144) could be the Myl initiation codon. Both the first and the second (Met23) AUG are

locatedinasequence contextacceptableforinitiation codons

(Cavener and Ray, 1991). Since in vitro transcribed and

translated Myl mRNA yields a doubletprotein band (data not shown), both AUGs may in fact beused as initiation codons.

We also identified two shorter cDNA isoforms, presumably lacking specific Myl exons (nucleotides

219-278 and 1396-1539, respectively; see Figure 1, sequences inbrackets, anddatanotshown). These putative alternative splicing events would generate Myl proteins deleted for amino acids 27-46 and 419-466, named

hereafter Myll (PML1) andMyl2(PML2)isoforms(seeMyl in Figure 2).

HybridizationofMyl cDNA to aSouthernblot containing

DNA from apanel ofhuman-hamster cell hybrids (Bios Blot, Bios Corporation; data not shown) confirmed that the Myl gene islocatedonchromosome 15 (de The et al., 1990). DifferentMyIRAR (PMLRAR) transcripts in two

classes ofAPLs

The above results indicate that the cloned Myl-RAR-a fusion protein present in NB4 cells, named hereafter

MylRAR-A

(PMLRAR-A), should possess 552 Myl amino acids N-terminal to the RAR-a B region. Sequencing of NB4 cell cDNA synthesized by PCR using a Myl primer (nucleotides 1742-1762) and a RAR-a 3'-UTR primer

(nucleotides 1597 -2015, numberingas in Petkovich etal., 1987),confirmed that the putativeMylRAR-Acontains the

integrityofthe RAR-oa B-Fregions and thus corresponds

to a955 amino acidlong protein(mol. wt 105 815Daltons, Figures 1 and2,and datanotshown). The presence in NB4 cells of RNA transcripts -1 kb longer than RAR-ao transcripts (deTheetal., 1990)isconsistentwith this

con-clusion. This altered pattern of RAR-o transcripts is similar

to that found in a number of APLpatients (Longo etal., 1990; Warrel etal., 1991), and we detected by PCR the MylRAR-A transcript in another APL patient, suggesting

that the MylRAR-A form of MylRAR fusion transcript is notrestrictedtothe NB4 cell line. In addition, sequencing of NB4 cell-derived cDNA (Figure 2b, primers Ml andR2),

demonstrated the existence of MylRAR transcripts which were deleted for the same nucleotide sequence missing in the Myl2 isoform (see Figure 2b; lane 1). This alternative

form of MylRAR-A protein will be referred to as

Myl2RAR-A (PML2RMyl2RAR-AR-Myl2RAR-A) (see Figure 2). Myl1RAR-A (PML1RAR-A), the putative MylRAR-A isoform deleted

forthe Myl sequencing missing in the Myl 1 isoform(Figure 2), has not yet been identified.

PCR-assisted analysis of RNA prepared from cells of sevenother APL patients revealedMylRARfusionproducts

smaller than those found in NB4 cells(seeFigure 2b,primers Ml andR2,lanes3 and4,and datanotshown).Sequencing of these PCR-amplified cDNAs showed that the point of fusion with the RAR-ai B region occurred atposition 1324 inthe Myl cDNA sequence (amino acid 394, see Figure 1,

open triangle B). The deduced MylRAR fusion protein

(nam-edhereafter MylRAR-B or PMLRAR1B) is 797 amino acids long(mol. wt89 288Daltons),andcomprisesthe first 394 amino acids ofMyland RAR-c B - F regions. Therefore, these patients represent a second class of APLs (class B),

with MylRAR-Btranscript andprotein smaller than those found in the NB4-like class A patients, and likely to

corres-pondtothe shorter class of size-altered RAR-x transcripts

reported previously in some APL patients (Longo etal.,

1990; Warrel et al., 1991). The putative MylRAR-B cDNA isoformcorrespondingtotheMyll isoform

(MylIRAR-B,

see Figure 2a) has not yet been detected.

ReciprocalRARMyI (RARPML) transcripts in APL cells Welooked for thepossibleexistence of fused RARet-Myl

transcripts originating from the reciprocal t(15;17) trans-location. PCR amplification with primers from the RAR-cxl 5'-UTR and the Myl3'

region

(see

Figure 2b,

primers

RI and M2, respectively) yielded amplified cDNAs with RNA preparedfrom NB4 cells and class B APL patients,

but not with RNA derived from promyelocytic leukemia HL60 cells (Breitmanetal., 1980) (Figure2c and data not

shown). Sequencing demonstrated that these cDNAs

correspond toreciprocal RARMyl

transcripts (Figure

2a).

InNB4 cells(classApatients), thetranscript conceptually

encodes a 140 amino acid long protein

(RARMyl-A

or

RARPML-A),mol. wt 14958

Daltons)

which fuses the Al region of RAR-a 1 tothe 80 C-terminalaminoacids ofMyl,

whereas thecorrespondingclass Bpatienttranscriptencodes a298 amino acid long protein(RARMyl-B or RARPML-B, mol.wt31 484Daltons)(Figure 2a,and datanotshown).

Inclass B patients, we found alsoRARMyl2-B transcripts

inwhichMylnucleotides 1396- 1539aredeleted(Figures

1, 2aandb),conceptuallyencodinga250 amino acidlong

(4)

1 GCTCTCCAGAGGCGGGCCCTGAGCCGGCACCTCCCCTTTCGGACAGCTCAA

52 GGGACTCAGCCAACTGGCTCACGCCTCCCCTTCAGCTTCTCTTCACGCACTCCAAGATCTAAACCGAGAATCGAAACTAAGCTGGGGTCC

142' AGCCTGCACCCGCCCGATCTCCGAGGCCCCAGCAGGACCCCGCCCGGCCCCAGGAGCCCAC A CCTCCCCEGAGACCCCCTCT 1 E P A P A R S P R P Q Q D P A R P Q E P T P P P E T P S 232 GAAGGCCGCCAGCCCAGCCCCAGCCCCAGCCCTACAGAGCGAGCCC GCTTCGGAGGAGGAGTTCCAGTT CTGCGC CCAGCAA

31 E G R Q P S P S P S P T E R A A S E E E F Q F L R C Q Q C 322 CAGGCGGAAGCCAAGTGCCCGAAGCTGCTGCCTTGTCTGCACACGCTG TCAGGATGCCTGGAGGCGTCGGGCATGCAGTGCC CATC

61 0 A E A K C P K L L P CCL HT L CS G

CO

L E A S G M Q C P I 412 TG CGCCCTGGCCCCTAGGTGCAGACACACCCGCCCTGGATAACGTCTTTTTCGAGAGTCTGCAGCGGCGCCTGTCGGTGTACCGG 91 Q A P W P L G A D T P A L D N V F F E S L Q R R L S V Y R 502 CAGATTGTGGATGCGCAGGCTGTGTGCACCCGCTGCAAAGAGTCGGCCGACTTCTGGTGCTTTGAGTGCGAGCAGCTCCTCTGCGCCAAG 121 Q I V D A Q A V C T R C K E S A D F W C F E C E Q L L C A K 592 TGCTTCGAGGCACACCAGTGGTTCCTCAAGCACGAGGCCCGGCCCCTAGCAGAGCTGCGCAACCAGTCGGTGCGTGAGTTCCTGGACGGC 151 C F E A H Q W F L K H E A R P L A E L R N Q S V R E F L D G 682 ACCCGCAAGACCAACAACATCTTCTGCTCCAACCCCAACCACCGCACCCCTACGCTGACCAGCATCTACTGCCGAGGATGTTCCAAGCCG 181 T R K T N N I F C S N P N H R T P T L T S I Y C R G C S K P 772 CTGTGCTGCTCGTGCGCGCTCCTTGACAGCAGCCACAGTGAGCTCAAGTGCGAC TCAGCGCAGAG RCCAGCAGCGACAGGAGGAG 211 L C C S C A L L D S S H S E L K C D I S A E UI Q Q R Q E E 862 GACGCCATGACGCAGGCGCTGCAGGAGCAGGATAGTGCCTTTGGCGCGGTTCACGCGCAGATGCACGCGGCCGTCGGCCAGCTGGGCCGC 241 D A M T Q A oQ E Q D S A

®DG

A V H A QQ H A A V G Q Q G R 952 GCGCGTGCCGAGACCGAGGAGCTGATCCGCGAGCGCGTGCGCCAGGTGGTAGCTCACGTGCGGGCTCAGGAGCGCGAG5GCTGGAGGCT 271 A R A E T E E L I R E R O R Q V V A H O R A Q E R E L E A 1042 GTGGACGCGCGGTACCAGCGCGACTACGAGGAGATGGCCAGTCGGCTGGGCCGCCTGGATGCTGTGCTGCAGCGCATCCGCACGGGCAGC 301 V D A R Y Q R D Q E E M A S R O G R L D A V

D

Q R I R T G S 1132 GCGCTGGTGCAGAGGATGAAGTGCTACGCCTCGGACCAGGAGGaGCTGGACATGCACGGTTTCCTGCGCCAGGCGCTCTGCCGCCGCGC 331 A L V Q R M K C Y A S D Q E UV L D M H G F

ODR

Q A L C R R 1222 CAGGAGGAGCCCCAGAGCCTGCAAGCTGCCGTGCGCACCGATGGCTTCGACGAGTTCAAGGTGCGCCTGCAGGACCTCAGCTCTTGCATC 361 Q E E P Q S L Q A A V R T D G F D E F K V R L Q D L S S C I

B

1312 ACCCAGGGGAAAGATGCAGCTGTATCCAAGAAAGCCAGCCCAGAGGCTGCCAGCACTCCCAGGGACCCTATTGACGTTGACCTcCCCGAG

V

391 T Q G K D A A V S K K A S P E A A S T P R D P I D V D L P E 1402 GAGGCAGAGAGAGTGAAGGCCCAGGTTCAGGCCCTGGGGCTGGCTGAAGCCCAGCCTATGGCTGTGGTACAGTCAGTGCCCGGGGCACAC 421 E A E R V K A Q V Q A L G L A E A Q P M A V V Q S V P G A H 1492 CCCGTGCCAGTGTACGCCTTCTCCATCAAAGGCCCTTCCTATGGAGAATGTCTCCAATACAACGACAGCCCAGAAGAGGAAGTGCAGC 451 P V P V Y A F S I K G P S Y G D V S N T T T A Q K R K C S 1582 CAGACCCAGTGCCCCAGGAAGGTCATCAAGATGGAGTCTGAGGAGGGGAAGGAGGCAAGGTTGGCTCGGAGCTCCCCGGAGCAGCCCAGG 481 Q T Q C P R K V I K M E S E E G K E A R L A R S S P E Q P R 1672 CCCAGCACCTCCAAGGCAGTCTCACCACCCCACCTGGATGGACCGCCTAGCCCCAGGAGCCCCGTCATAGGAAGTGAGGTCTTCCTGCCC 511 P S T S K A V S P P H L D G P P S P R S P V I G S E V F L P

A

V 1762 AACAGCAACCACGTGGCCAGTGGCGCCGGGGAGGCAGAGGAACGCGTTGTGGTGATCAGCAGCTCGGAAGACTCAGATGCCGAAAACTCG 541 N S N H V A S G A G E A E E R V V V I S S S E D S D A E N S 1852 TCCTCCCGAGAGCTGGATGACAGCAGCAGTGAGTCCAGTGACCTCCAGCTGGAAGGCCCCAGCACCCTCAGGGTCCTGGACGAGAACCTT 571 S S R E L D D S S S E S S D L Q L E G P S T L R V L D E N L 1942 GCTGACCCCCAAGCAGAAGACAGACCTCTGGTTTTCTTTGACCTCAAGATTGACAATGAAAGTGGGTTCTCCTGGGGCTACCCCCACCCC 601 A D P Q A E D R P L V F F D L K I D N E S G F S W G Y P H P 2032 TTTCTAATTTAGTCTCTGAGTCCCAAAAAGAAGTGCAGGCAGAGCATCTGCCAGGCCCAGGAGAGCTCTGAGCTCTGGCCAACAACTGCA 631 F L I 2121 GCCAGGCTGGGCAGAGCACTCCGGCTCACCTGGGCTCCTGGCGTGTCATTTGCTGGCTTGAATAAAGATGTCCGCCTTAAAAA A

Fig. 1. MylcDNAand amino acid sequences. Thededucedaminoacidsare shown below theirrespectivecodons. The two regions (nucleotides

219-278 and 1396-1539, respectively) which are excluded byalternative splicing in Myll andMyl2 (see Figure 2a) are bracketed. The TAG stop

codon andthe polyadenylation signal areunderlined. The open triangles A and B indicate the point where the Myl sequence is fused to RAR in class Aand B APLs,respectively. The peptide used to generate Myl antibodies is underlined by a dashed line. The first boxed regioncorrespondstothe

first cysteine-rich motif(Figure 3a); withinit, the conserved residues are circled. Threecysteine/histidine-rich clusters which may form zinc

finger-likestructures are underlined. The region which is likely to adopt a coiled coil structure is also boxed [the boundaries correspond to the limitofthe

predicted ca-helical protein segment (Gascuel and Golmard, 1988)], and within it,hydrophobic amino acids occurring at the first and fourth position ofthe heptadrepeat arecircledand underlined, respectively.

Detection ofMyIRAR-A (PMLRAR-A) and -Bproteins (Figure 2c, lane 5), whereas

MylRAR-A

andMyl2RAR-A

The cloned MylRAR-A and MylRAR-B cDNAs were cDNAs yieldedpolypeptidesmigrating with an apparent mol.

expressed in Cos-1 cells and the proteinswere revealedby wt of - 110 kDa(Figure 2c, lane 4, and datanotshown).

Western blottingwithapolyclonal antibody directedagainst Whether the

-110

kDa

MylRAR-A

species correspondsto

the F region of

RAR-c.

MylRAR-A was detected as a initiation from the second AUG (see above and Figure 1)

(5)

P.Kastneretal.

Fig. 2. Two classes ofMyiRAR and RARMyl transcripts and proteins. (a) Schematic structure ofMyIRAR andRARMyl cDNAs and proteins found in two classes of APL patients. On top, RAR-al and Myl cDNAs and proteins are schematically represented. RAR-cal A-F regions have

been defined on the basis of sequence comparisons between the different RAR subtypes (Zelent et al., 1989; Kastner etal., 1991). cDNA nucleotides

(top lines; numbering ofRAR-cal is according to Brand et al., 1990), and amino acids (lower lines) are numbered. The triangle at position 744 in

RAR-cxl

indicates the fusion point in MylRAR and RARMyl transcripts. A and B triangles in Myl indicate thepoints offusion between Myl and

RAR-ac1

sequences in class A and B patients, respectively. The black boxes correspond to the three cysteine-rich clusters, which may form Zn

finger-like structures in Myl. The Myl region which is likely to adopt a coiled coil structure is represented by ahatched box. The two regions of Myl which are excluded in Myll and Myl2transcripts (amino acids 27-46 and 419-466, respectively) are bracketed by dashed lines. Class A and

BMylRAR and RARMyl cDNAs and proteins characterized in APL class A and B, are represented below. In each case the nucleotide and derived

amino acids sequence occurring at the junction is given with the Myl sequence underlined. (b) PCR detection ofMylRAR and RARMyl fusion transcripts. The experiment is schematically represented on top. Myl andRAR-cal cDNAs around the fusion points are depicted and the nucleotides positions corresponding to the5' end of the PCR primer are indicated. The presumptive Myl exon which is excluded in Myl2 by alternative splicing

is bracketed. The PCR detection ofMylRAR and RARMyl transcripts present in NB4 cells and in two class BAPL patients (P1 and P2) is shown below in the left and right panels, respectively. PCR was performed with either the Ml and R2 primers (MylRAR amplification, left panel) orRI and M2 primers (RARMyl amplification, right panel) on cDNA derived from NB4 cells (lane 1), HL60 cells (lane 2)and two APL class B patients

(lanes 3 and 4). Amplified products were separated by electrophoresis and hybridized to end-labeled oligonucleotide probes 01 (left panel) or 02 (right panel). Amplified fragmentscorrespondingto MylRAR-A, Myl2RAR-A, MylRAR-B, RARMyl-A, RARMyl-B andRAR2Myl-B are indicated.

The -500 bp fragment seen in the right panel in lanes 3 and 4 may correspond to an artefactual amplification product since itwas not detected when other primer pairs were used. (c) Detection of cloned and endogenous MylRAR proteins by Western blot. 70i'g protein ofwhole cell extracts

from eitherHL60 cells (lanes 1 and 7), NB4 cells (lane 3) or bone marrow cells from a class B APLpatient (P1, lane 8) or 5-10I g protein of whole cell extracts from Cos-1 cells transfected with either 5

Ag

of expression vectors forhRAR-csl (lanes 2 and 6). MyIRAR-A (lane 5),

Myl2RAR-A (lane 4) orMylRAR-B (lane 9), have been separated by electrophoresis on a 10% SDS-acrylamide gel and analyzed by Western blotting (as described in Rochette-Egly et al., 1991) with the rabbit polyclonal antibody RPa(F)directed against the F region of human RAR-cx. Exposure time was 8 h for lanes 2-9 and 40 h for lane 1. The -55 kDa species seen in lane 5 is an in vitro degradation product of MylRAR-A,

since it was not seen when the cells were directly lysed at100° C (not shown). Note that MylRAR-A expression vectors which do ordonot contain

the upstream in frame CTG (nucleotide 19) generate the same protein pattern (not shown), excluding that the 120 kDa polypeptide species could be initiated at that CTG.

the - 120 kDa

MylRAR-A

was similarly detected using

extracts from NB4 cells and cells from class A patients (Figure 2c, lane 3, and unpublished results in collaboration with Dr Pelicci's group). The same 120 kDa species could also be immunoprecipitated with an anti-Myl (amino acid 484-499) polyclonal antibody

[RP(Myl)-l]

and revealed by Western blotting using the anti-RAR-a antibody (data not shown), which further supports the existence of the

MylRAR-A

fusion protein. The polypeptide encoded by

MylRAR-B

cDNA migrated with an apparent mol. wt of -90 kDa (Figure 2c, lane 9). A protein of similar size was revealed in extracts from cells of class B patients (Figure 2c, lane 8).

Itis noteworthy that the level of MylRAR proteins present in APL cells was muchhigher than that of RAR-at

[Figure

2c,

lanes 3 and8; the -50 kDapolypeptidedetected in NB4 cellextractis

likely

tobeaMylRAR-Adegradation

product,

since it

migrated

moreslowlythan RAR-ct1 presentineither Cos-1 transfected cells(lane 2) orHL60 cells (lane 1); note

also that lane 1 was exposed five times longer than lanes 2-9 and that similar amounts of RAR-a RNA were found in

HL60

and NB4cells (not shown)]. Incontrast, the levels of

MylRAR

andRAR-attranscripts appeartobe very similar in both classesofAPLpatients (see Longoet al., 1990; de

The etal., 1990; Warrel etal., 1991), suggesting that

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Myl MyIRAR proteinsin APL 55-L C A A 49-D Q I-14-V I D F 14-T C QO 13-V 3 EI 26-LPC 3 DEL 291-I I H L 16-L I G F-16-L I G F 114-D D I 18-N S * * 0 --KCPKLL L -QSRVPKLLE C --VEPVSI C ---AEPMMLE IC ---KEPVSAE WC ---KVPVLTE FC ---ADPVET C --IDATTIV F --IDATTIII tPHLRCDTF --SDLGKTM * 0* 21 21

E.

FX L L I

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83 ---EASGMfi1APWPLL TPA SLQRRLSVYRQIVDA A

111 AGGPSPFATQVGVI 3QE--- RHI DTTEVP-SSTVEKS

L~ ~

*

**.-*±

*0

*X**

** 0 0 0 * *

133 Kl..QRQ

F!~

TN

166 ED K SQRPV

0 *0 **0** * ** *0 *** * * * 0* *0 * 0

188 F TP TS LKP C KCD-ISAE]RQEEIMTQA

221 F K- IKL I lRYQEIEEAE QKVI 1LITK ** * * *

***

** * ***0

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257 DSAFGAVH gHAAVGQLGRARAE¶ IRERVRQVVAHVRAQERE

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Y

27 6 T 'rYTWVPThI(T(.MTI TrTM#ThIIVI f'riV, T V'PT.MYTAlk?7VVr- ATIi-~

MYL 189 T18 237 RFP 96 RO-52K 92 RPT-1 96 MYL T18 RFP RO-52K RPT-1 249 293 152 148 152 MYL 310 RFP 213 RO-52K 209 RPT-1 213

F*

~~~~~~~~~~~~~~~-raf

CYS/HIS

cluster

Coiled Coil

V

v v

y

v

C,NPNHRJTP YC GCSKP _4CcS[LLDS EELKCD- SAEI QRQE AMTQ

C F-- KEI YC TCDKLT D LL-- EHRYQF EEAENQKVI TLIT

C K-- H-REP YC EDQMPIo1 ,4DRSR- GHSVLP EEA GFKE NQLD

GCV--vH-GE FC KDGKA QSR- DHAMVP EEA EYQE VALG

;CUQH-GE -LFC KDMMVI RSQ- GHQT EEVDQEYKE GALW

.* *

*00*

* * *.

*_*

*

|EQDS iAVHAf AAVGaGRARAETEE a E FiQWA QER

DARYQRIj|

EKT TGN fNRII QNQKQVEQ TL KKG IE -B-raf

RVKDLKKRRRA EQARAEILSLTQMEREPI FVWE1EQLYHS HEY LEELDLA

RKQEL&KLEVEI

IKRA4KKTVETQKS$IHA4FIVQQKNFEEEQR

KDERE L

KKAKICDEWQDE LQRV ENQIQINVE 9QRj GLRD SKENE CKEKKE M

EE

SRLG

RAVLQ

RMKSYASDQ G

NS GAIT CNIS A EKQQQPTRE D

RI

EKEA4QQSQ

S RRCHSSALE I

|E

vESEN DQTE S HHLELSTLE C

* 0 0 0 0 *

Fig. 3. Similarities between Myl and otherproteins. (a) Myl belongstoagroup ofproteinswhich shareacysteine-rich motif. Residues at conserved

positionsareboxed. Stars indicate positionswhere perfectconservation occurs, whereasdots indicatepositionswhere similar, but notidentical,

residues arefound. (b) AlignmentofMyl and T18. Since thevery N-terminal sequences ofMyland T18 (Mikietal., 1991)do notdisplay

significanthomology, alignment is startedatCys57 andCys51 ofMyland T18, respectively. Nohomologywasdetected alsobetweenthe T18 B-RafsequencesandMyl. Residues conserved between Myl andT18 areboxedand indicatedby stars. Conservativereplacements areindicatedby dots. The regioncorresponding tothe cysteine-rich motifdisplayedin (a), aswellas aregion whichmay formacoiledcoil, areboxed. Open

trianglespointtoconserved cysteine andhistidine residuesbelongingtothe secondand thirdCys/Hisclusters in theMyl sequence. Blacktriangles

pointtothehydrophobic residuesdefiningtheheptadrepeats of the putativecoiledcoildomainin MylandT18. Thebeginningof B-Raf in the T18

sequenceis indicated by an horizontalarrow. (c) AlignmentofMyl, T18, RFP, RO-52Kand RPT-1 in the thirdcysteine/histidine cluster and inthe putative coiled coil. Hydrophobicamino acidsdefiningtheheptad repeathavebeenboxedas wellasamino acids which occuratpositions where identical orsimilarresiduesarefound in all fiveproteins. Other symbolsare asin Figure3b. Note also the frequentconservationof amino acids betweenthreeorfouroutof the fiveproteins.

RAR-a mRNA and/or thatMyiRAR proteinsare morestable

than RAR-ct.

Myl (PML) structural features and similarities with

other proteins

The N-terminal part ofMyl contains three clusters rich in

cysteineand histidineresidues, whichmayformzinc

finger-like structures (underlined in Figure 1). The first ofthese clusters (amino acids 57-91) defines a motif which has recently been pointed out in a number of proteins

[CXXCXII

27CXHX(F/L)CXXC(L/I)X3-48CPXC),

see Figure 3a and Freemont etal., 1991]. Several proteins of

thisgroupmaybe involvedin celltransformation: MEL-18

is expressed inmosthuman transformed celllines, butnot

(7)

P.Kastneretal. 1 57 229 360 MyIRAR-AI T * 1,1A 1 57 229 36OC MyIRAR-B RAF 1 51 252 W T18 I * B-raf

I

RFP-ret 116 132 255315 IKA

7ZA

I ret

[2CXXCX,CXHXXCXXCYX,CPXC

motif *Cys/Hisc

Fig. 4.Structuralsimilarities betweenMyIRARs<

fusion proteins T18andRFP-ret. A schematicrej

MylRAR-A, MylRAR-B, T18andRFP-ret isdisj fusionareindicated bytriangles.

innormal tissue (Tagawa et al., 1990); TI mousefusion protein between a novel prol

cysteine-rich motif and the B-Raf prot

etal., 1991; for convenience,the(as yet wild type protein corresponding to the r T18 will be hereafter referred to as T18\ isfusedwiththe ret proto-oncogene in a tr;

resulting from a chromosomal translo(

etal., 1988)and mouse Bmi-1 (aclosere cooperates with Myc in lymphoma den

etal., 1991; van Lohuizen etal., 1991 containing this cysteine-rich motifare ir of gene expression: RPT-1,whichaffects the IL-2 receptor (Patarca etal., 1988),t virus immediates early gene product ICI

HSV geneexpression) (GelmanandSilve

thevaricella zoster virus VZ61 protein (D 1986) which acts negatively on the exp: varicella virus and cellular genes (Nag 1991). This group of proteins includes

-is a yeast proteinrequiredforrepairof U

(Jonesetal., 1988). RAG-1 whichisenc

recombination activating gene (Schatz,

52 kDa component of the RO/SSA(RO-5' tein particlewhichisanautoantigen in

lul

andSj6drensyndrome(Ben-Chetrit etal., 1991; Itoh etal., 1991), the products c

genes CG30, PE38, the trypanosome L/I

etal., 1991 for refs) and the proteins

DrosophilaPosterior Sex Comb (psc) an Zeste [Su(Z)2] genes (Brunk etal., 19<

etal., 1991b).

Thehighestsirnilarityis found betweenI

itextends uptothe fusionboundarywith t] which constitutes the C-terminal part o

(Miki etal., 1991) (Figure 3b). All t

histidines of the second and third Cys conserved between Myl and T18 with

Cys2 13, indicating the functional

imp

residues which may be required for coord in zinc finger-like structures (see Berg, 1' 1991 for reviews). Myl and T18 also

disi

their third cysteine-rich cluster with

R4

RPT-1, where most of the cysteine and

are conserved (Figure 3c). (Note that R

RPT-1 contain only two cysteine/histidii

551

Immediately C-terminal totheMyl cysteine clusters isa I R region (amino acids 229-360, boxed in Figure 1) which is predicted to be mostly oa-helical (Garnier etal., 1978;

lZI

Gascuel and Golmard, 1988). This

region

was

compared

with the data bank and most of the similarities were found inprotein regions which are known to form a coiled coil

structure(CohenandParry, 1986). Theseproteinsincluded myosins, keratins, dystrophin, ae-actinin, flagellin, kinesin

heavy chain,

neurofilament

triplet

L

protein,

the

Drosophila

glued protein, tropomyosin, laminin-B2,spectrin, andFos,

lusters

DCoiled

Cdl Fra-1 and Fra-2 in their leucine zippers. This region of Myl contains stretches in which hydrophobic amino acidsoccur

and thetransforming at every seventh position (circled in Figure 1), with the

presentation

of frequent presence of a hydrophobic amino acid at the fourth played. Points of

position (underlined

in

Figure1). Interestingly, theseheptad

repeats are conserved between Myl, T18, RFP, RO-52K and RPT-1 (Figure 3b and c). Wenotealso that theregion which 8 isatransforming is immediately C-terminal to thecysteinecluster in RPT-1 teincontaining this has been reported to have a high probability offorming a

o-oncogene [Miki coiled coil (Lupas et al., 1991). Interestingly, the spacing notcharacterized) between the different stretches of heptad repeats has also

N4-terminal part of been conserved between the five proteins (Figure 3c). MT]. Human RFP Therefore, Myl,T18WT, RFP,RO-52K and RPT-1 define ansforming protein anovel proteinfamily. NotethatRFP,RO-52Kand RPT-l cation (Takahashi are more related to each other (see Chan etal., 1991 for lative of MEL-18) an alignment) than to Myl orTi8WT. Since T18, RFP-Ret velopment (Haupt andpossiblyMylRAR are transforming fusion proteins, these a). Other proteins proteins may represent a newfamilyofpotentiallyoncogenic ivolved in control proteins. Interestingly, MylRARs, T18 and RFP-Ret retain

stheexpressionof the cysteine/histidine rich motifs and either the entirely the herpessimplex (MylRARs and RFP-ret) or alargepart of the coiled coil ?O (a regulator of (possibly T18; note that the T18WT sequence C-terminal Xrstein, 1987), and ofthe fusion point is not known) (see Figure 4). These

lavidsonandScott, structural similarities suggest that the presence of these ,ression of several domains maybeimportant for thetransforming potentialof rpal and Ostrove, the fused proteins.

also Radl8 which Other interesting structural features of the Myl protein JV-damagedDNA correspond to the presence of a proline-rich N-terminus(of

odedbytheV(D)J which a portion is deleted in theMyll isoform,seeFigures

etal., 1989), the 1 and 2a) and of a C-terminusofmarked acidic character

2K)ribonucleopro- and richinserines,amongwhichseveralarepotentialtargets puserythematosus for phosphorylation by casein kinase II (note that this

C-1988;Chanetal., terminal domain is not present in the MylRAR fusions).

Af the baculovirus Rproteins (Haupt , encoded by the Id Suppressor-2 of

91; van Lohuizen Myl and TI8, since he B-Raf sequence

Ifthe T18 protein

the cysteines and

s/His clusters are

the exception of bortance of these

linatingmetal ions

990; Valleeetal.,

Play

similarities in 0-52K, RFP and histidine residues FP, RO-52K and ne clusters.)

Localization ofMyl, MyIRARand RARMyl

Theintracellular localization of Myl, MylRAR and RARMyl wasanalyzedby immunofluorescenceperformedonCos-1 cellstransfected with thecorresponding expressionvectors.

We also usedMyl(F),anepitope-tagged Myl,which consists ofMyltowhich theFregionof the estrogen receptor (ER) isC-terminallyfused(theER Fregiondoesnotpossess any nuclear targeting properties, unpublished results from our

laboratory). BothMylandMyl(F)weremostlynuclear,but

somestainingwasalsoseenin thecytoplasm of -80% of the transfected cells. Characteristicallyboth proteins were

excluded from the nucleolus and concentrated in discrete speckles within the nucleus (Figure 5; panels 2 and 3).

Myl(F)bearingamutation in thecysteine-richmotif of Myl

(Gln59 Cys6O - Glu59 Leu6O; Myl(F)m in Figure 5,

panel 7),aswellasN-terminallytruncatedMylandMyl(F),

starting at Met312, were localized exclusively within the nucleus in most transfected cells, had lost their speckled pattern, and were more uniformiy distributed (Figure 5,

.~~~~

.I fJ t,,._

(8)

Myl MyIRAR proteins k~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~AkAs: I_At. IA

-12

IA,; 2A 4t=42 b A F. V1_nA-A-- e 1 8 44 -:1- -:-A-,

U..

AD)3

U,

n.j

-Eu

G

A-MY- MV-A-Ak 2,Iy v22 IV M1YAILRA -B 23 24

Fig. 5. Localization ofRAR-a, Myl, MyiRARand RARMyl. Expression vectors encoding eitherRAR-ri (panels 1, 6, 15 and 16), Myl (panel 2),

the epitope-tagged Myl(F) (panels 3, 15-24), MylRAR-A (panels 4, 10, 11, 17, 18, 21 and 22),MylRAR-B (panels 5, 12, 13, 14, 19, 20, 23 and

24), Myl(F)m (panel 7), MylRAR-A(m) (panel 8)orRARMyl-A (panel 9) were transfected inCos-l cells, and thecorrespondingproteins were

revealed by immunofluorescence after 24h. In allcases the upper panel shows nuclei oftransfected anduntransfected cellsrevealedby Hoechst

DNA staining andthe lower panel correspondsto theimmunodetection. In panels 1 -14, cells have been transfected with 1Agofexpression vector,

as indicated. Noqualitative differences in the intracellular distribution pattern wasobserved whencells were transfectedwith loweramountsof vector

(1-100ng). Inpanels 15-24, cells have been transfected with 100ng ofMyl(F)and 1 ,g of either RAR-ce, MylRAR-AorMylRAR-B, as

indicated.

panel 7, and data not shown). It is likely that Myl

con-tains a nuclear localization signal (NLS) (Silver, 1991)

located in the C-terminal portion of the protein. The

KRKCSQTQCPRKVIK basic sequence (amino acids

476-490) isapossible candidate. From the uniform nuclear

distributionoftheMyl(F)m molecule,weconclude that the cysteine-rich motif is required for the speckled distibution of Myl.

In contrast to

RAR-ca

localization whichwasexclusively nuclear and finely dispersed in all of the transfected cells

(Figure 5, panels 1 and 6). MylRAR-A and MylRAR-B staining was localized both in the cytoplasm and in the

nucleus, although occasionally it was only nuclear (in

10-20% ofthe cells in thecaseof

MylRAR-A

andin <5 % in thecaseofMylRAR-B) (Figure 5, panels4 and5). The

granular MylRARnuclear distribution wasclearly different from that of Myl. MylRAR-Abearingamutationin the Myl

cysteine-rich region (Gln59 Cys6O - Glu59 Leu6O;

MylRAR-Amin Figure 5, panel8),aswellasN-terminally truncatedMylRAR-A startingatMet312 (notshown), were

exclusively nuclear and more uniformly distributed, indicatingthatthe Myl N-terminal region may modulate the nuclear translocation of MylRAR-A and its granular distribution. Interestingly, the addition of RA resulted

in an increased and more uniform nuclear localization of

MylRAR-AandMylRAR-B accompanied byaperinuclear accumulationof theproteins (Figure 5,panels 10-14).Note

that, both in theabsenceandpresence ofRA, MylRAR-A

was'more nuclear' than MylRAR-B, possibly reflectingthe

presence in MylRAR-A ofboth Myl and RAR NLS. RA had no effect on RAR-ca localization (not shown).

The localization of the 'reciprocal' protein RARMyl-A

wasanalyzedwith anantibody directed againsttheAl region

ofRAR-ct. In all of the transfected cells. RARMyl-Awas

essentially nuclear with a granular distribution (Figure 5, panel 9). Given its smallsize, RARMyl-Aislikelytodiffuse freely into the nucleus where it may be retained by binding

to nuclear components.

Functional differences between MyIRARs and RAR-a

Transcriptional activation bythedifferent MylRAR proteins

was studied in either HeLacells orCos-1 cells transiently cotransfected (in the presence or absence of RA) with a

reporter plasmid containing the chloramphenicol acetyl transferase (CAT) geneunder thecontrolof aRA-responsive

promoter, and anexpressionvectorencoding either human RAR-a1 (hRAR-ca1), hRAR-ca deleted for region A

[hRAR(A)] or aMylRAR fusion. The parental expression MVY

6

M_,PA .E ox

U

(9)

P.Kastner et al.

M:.

Fig.6.Transcriptional properties ofMyiRARson RAtarget genes. (a)-(e): HeLacells (leftpanels) orCos-I cells (right panels) weretransfected withpTL2 (lanes and8), hRAR-al (Brand etal., 1988) (lanes2 and9), hRAR(zAA) (lanes 3 and 0), MylRAR-A (lanes4 and 1), MylI1RAR-A

(lanes5 and 12), Myl2RAR-A(lanes 6and 13) andMylRAR-B (lanes 7and 14), togetherwith the following RA-responsive promoter/CATreporter genes. (a) synthetic (TRE3)3-tk-CAT (Zelentetal., 1989), (b) mouse RAR-cx2 promoter[mRAR-at2/CATI (Leroy etal., 1991)], (c) mouseRAR-f32

promoter[mRAR-032/CAT (Mendelsohnetal., 1991; Smith etal., 1991)], (d)mousecellular retinol binding protein Ipromoter[mCRBPI/CATI (Smithetat., 1991)], (e) mousecellular retinoic acidbinding protein promoter (mCRABPII/CATI, B.Durand andP.Chamnbon, inpreparation).

Black bars represent basal levelsinthe absence ofRA, andhatched bars induced levels inthepresence of 10-6MRA. (f) and(g): repressionofthe basal promoteractivity of different reportergenes by MylRAR-Aand MyIRAR-Bin HeLa and Cos-1 cells, respectively. The bars represent the CAT

activityobserved in the absence of RA when eitherm.RAR-oa2/CATl, (TRE3)3-TK-CAT, mCRBPI/CATI, mCRABPII/CATI weretransfected with eitherpTL2 (control), hRAR-cal, MylRAR-AorMylRAR-B, asindicated.

vectorpTL2(Greenetal., 1988,and Material andmethods)

was used in control experiments in which RA-induced

expressionwasduetoRARsendogenoustoHeLaand Cos-1

cells. The reporter plasmids were either

(TRE3)3-tk-CAT

(Zelent etal., 1989) which contains a synthetic RARE,

mRAR-a2/CATl

(Leroy etal., 1991),

mRAR-g2/CAT

(Smith etal., 1991; Mendelsohn et

al.,

1991),

mCRBPI/CAT1 (Smithetal., 1991)andmCRABPII/CAT1

(B.Durand and P.Chambon in preparation) which correspond

to natural RA responsive promoters.

Cotransfections of either MylRAR-A, Myl1RAR-A, Myl2RAR-A or MylRAR-B had comparable effects on a

givenreportergene,both in theabsenceorin thepresence

of RA. However, the magnitude of the response varied

widely, dependingonboth thereporter gene promoter and

(10)

IF_ ..-. A B C D E- F A B A 'P -u-- rh Abe3F3 LE M.-*,.i. 0 y;HRAR-B ---e RPWY., F) Myl224RAR-B -IMyl273RAR-B RAR-u I

4lk-S

:7- . ii. Z:. r. :-,I"'..-!. . I . j". 0 z- k - F-- #-. r. -%- " 1. , !.., -...7I..". .-;

Fig. 7. Coimmunoprecipitation of Myl and MyIRAR-B. Extracts A-Farefrom Cos-I cells that have cotransfected with Myl(F) (Myl taggedwith

theER Fregion) and either MylRAR-B (extracts A andB), hRAR-al (extracts C andD). Myl224RAR-B (extract E)or Myl273RAR-B (extractF). Cells usedforpreparationof extracts B and D have been grown in the presence of 10-6 M RA. Extractswereimmunoprecipitated with the anti-ER F regionAb(F3) monoclonal antibodyor anon-reactive ascite fluid (NRA), asindicated. Immunoprecipitates wereloadedontwo SDSgelswhich were revealed withAb(F3) (upperpanel)ortheanti-RAR-cs F regionpolyclonalantibody RPa(F)(lower panel). 5 tl ofeach cellextract(1/200of

the material used for immunoprecipitation) was loadedin lanes 1-6.Extracts in lanes9and 10have been boiledfor 15min priorto

immunoprecipitation. Starts pointtoimmunoglobulinspresent intheimmunoprecipitatedsamples.

6a-e), (TRE3)3-tk-CAT and mCRBPI/CATl expressions

were stimulated to similar extent by hRAR-cx1 and

MylRARs, whereas MylRARs were less efficient than

hRAR-ol at stimulating the mRAR-a2/CAT reporter. In contrast, MylRARs (particularly MylRAR-A) were more

efficient than hRAR-a1 at activating mCRABPII/CATl expression. Inthecaseof mRAR-,B2/CAT, hRAR-al and

MylRARsactivatedsimilarlyin HeLacells,whereas

hRAR-alI was moreefficient than MylRARs in

Cos-l

cells. The

apparent affinity ofMylRARs for RA was similar tothat ofhRAR-xl1, with in both cases ED50 of -5 x

10-9

M

for the stimulation of the CRABPII promoter (data not

shown).

Interestingly, in the absence of RA, MylRARs had a

repressive effectonthe basal activity of certainreporter gene promoters, underconditionswherehRAR-a1 cotransfection

resultedinno ormuch less repression (Figure 6f-g). This

differential repression wasparticularly clear in thecaseof

themRAR-a2and mCRBPIreporter gene promoters(Figure

6fand g). Note that in allcaseshRAR-o1 andhRAR(AA) had similareffects, which indicates that thepromoter- and

cell-specific differences between hRAR-a1 and MylRAR activation andrepression functionsareduetothe presence

ofthe Myl sequence in MylRARs.

Since the reciprocal translocation product, RARMyl, containsaMyl regionrich in acidic amino acids (see above andFigures 1 and2a),wetested whether RARMyl-A could

squelchtheactivityoftwoacidic activators in cotransfection

experimentssimilartothose reported byTassetetal. (1990).

No effect was found on Gal4 or Gal-VP16 activated

transcription, norcould RARMyl-A interfere with

hRAR-a1-mediated gene activation (data not shown).

Association between Myland MyIRAR

Since Myl contains a putative coiled coil structure (see

above), we tested wheter Myl derivatives could associate. Cos-1cellsweretransientlycotransfected either withvectors

expressing the epitope-tagged Myl(F) andMylRAR-B, or

Myl(F)and

hRAR-al

vectors.Extracts wereprepared from both sets of transfected cells and subjected to

immuno-precipitation with either the Ab(F3) monoclonal antibody specific for the ER(F)tag, or acontrolascitic fluid. Immuno-precipitates werethen separatedbyelectrophoresis ontwo

identical gels whichwereanalyzed by Western blotting with Ab(F3) and an anti-RARa-F region polyclonal antibody [RPa(F)]. Myl(F) and MylRAR-B, but not Myl(F) and

hRAR-at 1,coimmunoprecipitated (Figure 7, lanes 7-8and 11-12). A similar coimmunoprecipitation was observed whenthe cellswere grown in thepresence ofRA (Figure 7, lane 8). This coimmunoprecipitation was not observed when the cellextract wasboiledpriortoimmunoprecipitation (Figure 7, lanes 9 and 10)nor was it observed between the

ER and MylRAR-B (not shown), excluding potential

antibodyartefact. Similar resultswereobtained with invitro

cotranslated MylRAR-A and Myl(F) (datanotshown). Thus, theformation ofMyl(F)/MylRARcomplexes suggeststhat Myl and MylRAR may actually form homo- and

heterodimers in solution. We tested the ability oftwo

N-terminallytruncated MylRAR-B moleculestoassociate with

Myl(F). Myl224RAR-BismissingallsequencesN-terminal

to Glu224 (which include the cysteine clusters) and Myl273RAR-B is missing all sequences N-terminal to

Ala273(missingthecysteine clustersandpartof the putative coiled coil). Myl224RAR-B, but not Myl273RAR-B,

coimmunoprecipitatedwith Myl(F) (Figure 7, lanes 13 and 14). Thus the conserved cysteine-rich regions are not

involved in Myl/MylRAR association, whereas the coiled coilregionisrequired,mostprobably byprovidingasurface for dimerization. In a similar experiment, no coimmuno-precipitation could be observed betwen MylRARs and an

epitope-tagged RAR-a (notshown), indicatingthat, although

aputative dimerization interface has been proposedtoexist in RAR-a (Forman and Samuels, 1990), this domain does

not allow formation of stable RAR-a/MylRAR dimers in solution.

Toshowthe Myl/MylRAR complexesareformed within

cells, Cos-1 cells were cotransfected with Myl(F) and

MylRAR, or Myl(F) and hRAR-a1, andthe intracellular localization ofMyl(F)wasinvestigated. When cotransfected with hRAR-a 1, Myl(F) exhibited the expected Mylpattern

AMIMLAML-wmA.Mo. AilliolowAmb.00.

(11)

P.Kastneretal.

11

I

Fig. 8. Colocalization of Myl and MylRAR-B, Cos-l cells cotransfected with Myl (1 Ag)andhRAR-cal (100ng) (a), Myl (100ng)and MylRAR-B (1 ytg)(b) and MylRAR-A (1Ag)and hRAR-al (100ng) (c) were subjectedtodoubleimmunofluorescence with the anti MylRP(Myl)-I polyclonal antibody, detecting Myl and MylRAR-A, butnot MylRAR-B, theAb(9c)F monoclonal antibody detecting hRAR-al and MylRAR-Bin (a) and (b), andAblOal(A1), detecting hRAR-al in (c). Top panels shows the DNAHoechststaining, middle panels theRARa orMyIRAR-Blocalization and lower panels the Myl orMylRAR-A localization, asindicated.

(Figure5, panel 15). In contrast, whencotransfectedwith

MylRAR-A or-B, Myl(F) displayed the typicalpattern of MylRAR both inthe absence (compare panels 17 and 19 with panels 18 and 20 in Figure

5)

or presence of RA (comparepanels21 and 23 withpanels22 and 24 inFigure

5). To support further thecolocalizationof coexpressedMyl

and MylRAR, cells were transfected witheither Myl and

MylRAR-B or Myl and hRAR-a1 andthe distribution of

Myl, MylRAR-B orhRAR-a1 wererevealed in the same

cells bydoublelabellingimmunofluorescence. Asexpected, coexpression of Myl andhRAR-a1 did not perturb either Myl or hRAR-a normal localizations (Figure 8a). In contrast, when coexpressed with MylRAR-B, Myl adopted the exact MylRAR-B localization pattern (Figure 8b). Therefore, Myl is likely to be associated with MylRARs

withinthe cell,and thisassociationappearstointerferewith its 'normal' intracellular localization. In similar double labelling immunofluorescence experiments, transfection of

MylRAR-Ain excess[revealedspecificallywith

RP(Myl)-1]

together with hRAR-al [revealed with

AblOal(Al),

directed against the RAR-ct1 Al region] did not alter

significantlythe nuclear localization of RAR-al (Figure 8c),

further indicating that MylRARs and RAR-a1 do not

associate.

Discussion

We reporthere the molecularcharacterizationof twoclasses (A andB) ofreciprocalRNAtranscriptsandproteinswhich result from the chromosomal

t(15;

17)translocation specific

to APL. In both casesthe breakpoint in theRAR-a gene is located in the intronseparatingtheexonencodingregion

Bfrommoreupstreamregions which contain the two

RAR-ca

gene promoters and themultipleexonsencoding the different

5'-UTRs and A regions of the various

RAR-at

isoforms (Brand etal., 1990; Leroy et al., 1991; P.Leroy and

P.Chambon,unpublished results). In contrast, there are two classes ofbreakpointsinthe Myl gene, resulting in MylRAR-A and B fusion transcripts and proteins, and in the

corresponding RARMyl-A and B reciprocal counterparts.

Theexistence of these two A and B classes is in agreement with previous reports, which showed that there are two

different size classes of abnormal RAR-ct transcripts in APL patients (Longoetal., 1990; Warrel et al., 1991). Note that we detected only one class oftranscripts (either A orB) in anygivenpatient, thus confirming the clonal origin of the APL tumoral cells. The PCR assay that we used here offers a sensitive and reliable assay to discriminate between the twot(15; 17) translocation classes, thus making possiblean

investigationintowhetherAand Bpatientsrespond similarly to RA treatment.

Mylcontains acysteine-rich motif which is shared by a newly identified group ofproteins, ofwhich some appear toexertregulatoryfunctionsinthe nucleus. The occurrence of this motif, in species as distant from human as yeast and trypanosome (seeHauptetal., 1991 forrefs),suggests that it couldperformanevolutionarilyconservedfunction. It may possibly form a new zinc-coordinated finger structure(Berg, 1990; Vallee etal., 1991), which could correspond to a novel class of DNA (or RNA)bindingmotif. Two additional cysteine-rich motifs are present in the N-terminalregionof Myl which also appear to beevolutionarilyconserved (see

Figure 3). Immediately C-terminal to these cysteine-rich motifs, Mylcontains aregionwhich islikelytoform a coiled coil. In agreement with the existence of this structure, we have shown that Myl can form a complex with MylRAR (presumably as aheterodimer)andthat the Myl coiled coil is requiredfor this association. In addition, Myl contains a proline-rich region, as well as an acidic region, both of which have been found in the activating domains of some

transcriptionfactors(MitchellandTjian, 1989).The overall N-terminalstructure(putativeZnfingers followedby a coiled

coil, see Figure 3) has been conserved between Myl,

T18WT, RFP, theputative transcription factor RPT-1 and the 52 kDa component of the RO/SSA ribonucleoprotein particle. These proteins define a novel protein family, and

(12)

Myl

theseproteins represent a newclass ofproteins whichmay be involved in cell transformation.

Could Myl beatranscription factor?This idea is supported byitssimilarities with other proteins (e.g. ICPO) and RPT-1)

which possess regulatory functions and could be transcription

factors, andby the presence of both putative DNAbinding

and activating domains within the Myl sequence. The possible presence of an activation function in the Myl portion present inMylRARs is supported by the strong activation of the CRABPII promoter by MylRARs, but neither by

RAR-oa nor by RAR-a deleted for the A region. Note, however, that we did not observe any stimulation ofGal4

reporter genes transfected into

Cos-1

cells together with a vector expressing the entire Myl protein fused to the Gal4 DNAbinding domain (Tora et al., 1989; our unpublished results). On the other hand, the speckled nuclear distribution of Myl aswellasits similarity with the RO-52K protein may be more consistent with a role of Myl as a component of

ribonucleoproteincomplexes. In this respect, it is noteworthy that (i) two proteins of the same group, ICPO and the RO/SSA 52 kDa ribonucleoprotein, have been reported to

display speckled nuclear localizations (Gelman and

Silverstein, 1987; Ben-Chetritetal., 1988); (ii) the mutation of two residues in the conserved cysteine-rich motif is

sufficientforabolishingthe speckled appearance and making Myl fully nuclear. Spliceosomes have also been shown to exhibit a speckled nuclear distribution (Fu and Maniatis,

1990; Carmo-Fonsecaetal., 1991; Gall, 1991). However, we notethat thespliceosome-specificantibody SC35 (Fu and

Maniatis, 1990) does not label the Myl speckles (our unpublished results).

Irrespectiveof the actual function ofMyl, there is little doubt that its fusionproducts with

RAR-oa

areresponsible for the lack ofdifferentiation ofpromyelocytes, which is

tightly correlated with the t(15;17) translocation and the expression of abnormal RAR transcripts in APL (Longo

etal., 1990;Warrel etal., 1991).Inthis respect it is striking

that the portion of Myl which is fused with RAR in

MylRARs contains a cysteine-rich and coiled coil motifs

which arealso found inthe N-terminal moiety of the two

oncogenic fusion proteins T18 and RFP-ret (see above).

Althoughit cannot beexcludedthatthereciprocal RARMyl fusion products could be partially responsible for the block ofpromyelocyte differentiation in APLs, we will restrict below our discussion to the possible role ofMylRARs in

this blocksinceit is relievedbyRA treatment. Any model aimedatexplainingtheeffects ofMylRARsonpromyelocyte

differentiation must ultimately account for two facts: (i) normal Myland RAR-a are apparently synthesized by the

non-translocated allele genes in APL cells; (ii)

supra-physiological RA concentrations are required in the blood

ofAPLpatientstoresultin remission (Warrel et al., 1991).

Ifone assumes that Myl and/or RAR are involved in the controlof normalmyelocyte differentiation, it follows that

MylRARs

mustnotonly be unabletoperformthe functions ofMyland

RAR-ca,

butalsoact astrans-dominantinhibitors ofthesefunctions; furthermore increased concentrations of

RA would be required to relieve this negative

trans-dominance.

Twomechanisms can be considered. Firstly, MylRARs

could interfere with a normal physiological control of expression of RA-responsive genes, which may be crucial fordifferentiation ofpromyelocytesto granulocytes. Note in this respect thatRAis knowntoinducethe differentiation

of several non-acute promyelocytic leukemia cell lines

(LubbertandKoeffler, 1988). MylRARappearstobe

pre-sent atmuch higherlevels than wild type RAR-a inAPL cells (see Figure 2c), and therefore its effects are likelyto

be dominant to those of RAR-a. We haveshown, aswell

asothers

(de

Theetal., 1991;Kakizukaetal., 1991;

Figure

6)

that MylRAR-A and MylRAR-B have similar

trans-activating propertieswhichcandiffermarkedlyfrom those ofRAR-a1. These differences betweenMylRARsand RARs may be due to the presence in MylRAR of the Myl

dimerization interface and probable MylRAR homodimers may have different DNAbinding/transactivating properties

than RAR-a, which does not homodimerize efficiently and

requiresanadditional nuclear factor to bind to RAREs(Leid

etal., 1992). Interestingly, MylRARs can repress the basal activity of some RA target gene promoters in the absence of RA, whereas the same promoters are transactivated in the presence of RA (Figure 6). It is possible that the actual level of RA is too low in the blood of APL patients to

ac-tivate MylRARs which would then act as repressors. Increas-ing the RA concentration in APL patients could be necessary to convertMylRARs into RAR-like activators, and also to improve their transfer into thenucleus, assuggestedby the results shown in Figure 5. In other words, at RA

physiological concentrations, the repressive effect of MylRARs woulddominate,andsupra-physiologicalRA con-centrations would be necessary to convert MyiRARs into activators of RA target genes. In this respect, we note that the basal activity of the RAR-az2 promoter is particularly sensitive to MylRAR repression. Whetherexpressionof this RA-inducible RAR-a isoform is required for the expression of RA target genespossibly involvedinpromyelocyte

dif-ferentiation, remains to be seen.

On the other hand, RA may not be required for the

physiological differentiationofpromyelocytes, whichwould bedependentonMyl,whose function would be trans-domin-antlyrepressed by MylRARs in APL. Thisnegativeeffect could result from the formation of inactive and inappropri-ately located Myl/MylRARcomplexes (possibly heterodi-mers) unable toperformthe normal function ofMyldimers. If Myl isatranscription factor, Myl/MylRARheterodimers might be unable totransactivateMyl target genes because a Myl activation function (perhaps corresponding to the acidicMylC-terminalregion)may belackinginMylRARs.

This defect would then be compensated whentheactivation function in the RAbindingdomain present inMylRARs is activated by RA.

Inconclusion, althoughwehave characterized the products

resulting from the APLtranslocation, the present study of their functionalpropertiesdoesnotleadto aclearcut model

accounting for the remarkable efficiency of RA in the treatmentof APL patients. It cannotbeexcluded also that the fusion productsbyMyl andRARcouldblockmyelocyte

differentiation ofmodulating the activity of genes whose

expressionisnotnormallycontrolledbyMyland/or RAR-a.

Elucidatingthephysiological function ofMylisanobvious

prerequisitetofurther progress in theunderstanding ofthe molecular mechanisms leading to altered myelocyte

differentiation in APL. That Myl may perform important

functions is strongly suggestedby its structural similarities witha newgroup ofproteins,of whichsomehaveoncogenic properties when fused with -other proteins.

Three studies reporting the characterization ofMyl and

(13)

P.Kastneret al.

completion

of the present report (de The et al., 1991; Kakizuka etal., 1991; Pandolfi et al., 1991).The fusion

transcript

identified by both Pandolfi et al. (1991) and de

The etal. (1991) is identical to MylRAR-A, whereas

Kakizuka etal. (1991) have isolated a fusion transcript

identicaltoMylRAR-B.Itis interestingto note that our Myl sequenceisdifferent from those reported by all three groups, whicharethemselves differentfrom each other. In all cases the

reported

Myl sequences are identical at least up to the

point

offusion with RAR-a sequence in MylRAR-A (Myl

amino acid 552). Inthe case of Kakizuka et al. (1991), the

divergence

whichstarts at amino acid 553 is due to an 8 bp

insertion which may correspond to a mini-intron. The

divergence

withthe de The et al. (1991) andPandolfiet al.

(1991)

Mylsequence (which are different from each other)

occursatnucleotide 1851 (amino acid 570) and is likely to

correspond

to a splice junction. The significance of these

differences which may reflect a complex pattern of

alternative splicing in the C-terminal region of Myl is

unknown.

Materials

and

methods

Cloningof cDNAs andPCRdetection of MyIRAR and RARmyl MylcDNAswereclonedasfollows. Athree step anchored PCR walk was performedonNB4 cDNA toisolateMylcDNAsequences upstream of the

fusionpointwithRAR-cr. Typically,5yg of total NB4 RNA (Lanotte etal., 1991) wasreversetranscribed with aspecificRAR-caregion B anti-sense

oligonucleotideand theresultingcDNA dG-tailed. Two rounds of anchored

PCRwerethenperformedwithtwo nested 3' primers, as described (Loh

etal., 1989;Kastneretal., 1990; Zelentet al., 1991). Thefirstand second

anchored PCR stepsyielded sequences up to nucleotides 969 and 279, respectively (see Figure 1). The 3' Mylsequences have been cloned by

PCRusingtwonestedMyl primers (nucleotides 1712-1731 and 1742-1762,respectively)andoligo(dT)-containingprimers, as described (Frohman

and Martin, 1991).All sequences have been determined on at leastthree independentclones. PCR analysis ofMylRAR and RARMyl transcripts was

carriedoutasfollows:5 MgtotalRNA was reverse-transcribed with either aRAR-cx Cregionantisenseoligonucleotide primer(MyIRAR

amplifica-tion)and withanoligo(dT)-containing primer(RARMyl amplification). One

tenth ofthereversetranscription reactionwas employed for PCR. 35 cycles

of PCRwereperformed(1 min at94° C,2min at60° C, 3 min at72° C) with 100pmolof eachprimerin a buffer containing 10 mM Tris-HCI pH 8.8,1mMMgCl2,50 mMKCI, 200 Mg/ml BSA and 100 MMdNTPs. Primer sequences were: Ml, 5'-GAGCTGCTGGAGGCTGTGGA;

M2, 5'-TCTTCCGAGCTGCTGATCAC; RI,

5'-GCCCACCAGAGG-CCCCCTGC: R2, 5'-AAAGCAAGGCTTGTAGATGC. Plasmid constructions

MylRAR-A (see Figures1 and 2a)expression vectorwas constructed from

threefragmentsproducedby restriction digestionofPCR-amplifiedproducts: BglH-KpnI(nucleotides 107-1056).KpnI-SacH(nucleotides 1057-1864)

and SaJll-EcoRI (nucleotides 1864-3009). Note that EcoRI and SacII arenewsitescreatedbyPCR; the creationofSac1 site in the RAR B region

changesthesequenceCCCCGC intoCCGCGG(nucleotides 470-475 in

Petkovichetal., 1987, encoding ProArg)and the EcoRI site is located just

downstream ofthe RAR-a stop codon (TGAATTC). These fragments

wereligatedtogetherinto thepTL2 expression vector(a gift of Tom Lufkin) between the BglII and EcoRI sites. pTL2 is identical to pSG5 (Green etal., 1988), but possesses a BglII-KpnI-SacI-PstI-SmaI

-NotI-HindIHl-BamHI-EcoRIpolylinkeras cloning sites. The resulting

plasmid (MylRAR-Ao)waslinearizedwithBglIIand the 1065'-terminal Myl nucleotideswere inserted as a BgllI fragment (obtained by PCR)

generating MyIRAR-A.BothMylRAR-AoandMylRAR-Agenerated the

same 120and 110 kDaproteinswithsimilar efficiency when transfected

into COS-1 cells (not shown). MyllRAR-A(see Figures 1 and 2a) expression

vectorwasmade by replacingtheBglII-KpnI fragmentof

MylRAR-AO

with thecorrespondingfragment of Myl 1obtainedby PCR from NB4 cell RNA.Myl2RAR-A(see Figures1 and 2a)expressionvector was obtained by replacing the KpnI-SacII fragment of MylRAR-A< with the correspondingMyl2RAR-Afragmentwhich wasobtainedby PCR performed on NB4cell RNA. MylRAR-B(see Figures 1 and 2a)expressionvector

wasgeneratedby replacement of the KpnI-SacII fragmentof

MylRAR-Arkwith thecorrespondingfragmentobtainedbyPCR from classBpatient RNA.TheMyl expressionvector wasmadeby insertingtheMyl106-2058 nucleotidesequence (seeFigure 1)between the

BglII

and EcoRI sites of

pTL2. Myl(F) expressionvector wasconstructedby insertingbetweenBgIH

andEcoRI ofpTL2,theMyl 106-2040sequencefusedwith the Fregion

of the humanestrogen receptor(nucleotides 1869-2020,Greenet

al.,

1986).

A XbaI site was created at the Myl-ER junction with the nucleotide

sequence being CTAATTCCTTCTAGAACTAGC, which encodes L-T-P-S-R-T-S. Note that a proline residue has been introduced to

allowforflexibilitybetween Myl and ERsequences.TheQ59C60-E59L60

mutationpresentin Myl(F)m and MylRAR-A(m)vectors wascreated by

site-directed mutagenesis changingCAATGC(nucleotides 316-321; see Figure 1)into GAATTC and thuscreatinganEcoRIsite. RARMyl-Avector was constructedby subcloning into theEcoRI site ofpSG5 thefragment

obtained by PCR from NB4 cDNA with the primer pair 5'-ATGAATTCCACCATGGCCAGCAACAGCAGCT and

5'-ATGAATTCTTTGGGACTCAGAGACTAAA. hRAR(AA) expression

vector wasconstructedbyPCRamplificationof thesequenceencoding the

B-FregionsofhRAR-cs,andsubcloningintoKpnI-EcoRIsites ofpTL2.

Amplification wasperformed onMyIRAR-Awith the 5' oligonucleotide

5'-ATGGTACCACCATGGCCATTGAGACCCAGAGCAG and the 3' oligonucleotide5'-ATGAATTCACGGGGAGTGGGTGGC.

Myl224RAR-BandMyl273RAR-B were madebydeleting in MylRAR-B nucleotides

upstreamofnucleotide 811 and nucleotide 958 (Figure 1), respectively. Theresulting inserts arecloned between BglIIand EcoRI sites in pTL2

and their 5'sequencesareAGATCTCCACCATGGAGCTC. . ., encoding MetGluLeu. . (Myl224RAR-B) and AGATCTCCACCATG

GCCGAG.... encoding MetAlaGly ... (Myl273RAR-B). All cloned

fragmentswhich have been obtained by PCR have beenresequenced. Antibodies, immunofluorescence, immunoprecipitation and Western blotting

RP(Myl)-1 wasraised against the syntheticpeptideCPRKVTKMEGEEGKE (underlined by dashes in Figure 1), which was coupledtoovalbuminvia thecysteineresidueasdescribed(Rochette-Eglyet

al.,

1991). Immunization of rabbits and antiserum preparationwas as in Gaubet

al.

(1989). The immuneserum wascharacterized byWesternblotandimmunofluorescence analysis oncloned Myl, Myl(F)andMylRAR-A. Other antibodies used in this studywere: Ab9ca(F), amonoclonal antibody directed againstthe

F region of RAR-a (Gaub,M.P., Rochette-Egly,C., Lutz,Y., Ali,S., Matthes,H., Schever,I. and Chambon,P., in preparation), which detects RAR-cal, MylRAR-A, MylRAR-B and MylRAR-A(m); AblOail(Al), a

monoclonalantibodydirectedagainstthe Al region ofhRAR-crl (M.P.Gaub,

in preparation) which detects hRAR-a I and

RARMyl-A;

Ab(F3), a

monoclonal antibodydirected againstthe Fregion of the humanestrogen receptor(hER) (Metzger,D., Ali,S.,Lutz,Y., Bellocq,J.P.,in preparation) which detects Myl(F) and Myl(F)m.

Immunofluorescence(seeFigure5)wasperformedasfollows.Transfected Cos-I cells, cultured in Leighton tubes (Costar) in Dulbecco's medium supplemented with 5%delipidized fetal calfserum, wereprocessedfor the immunodetection essentially accordingtoLutzetal. (1988)exceptthatthe

methanol/acetone steps were omitted. Controlexperimentswhere the

fixation/

permeabilization procedurewasreplaced byamethanol/acetone procedure showed alsonomodification in the antigen distributionnordid the absence

orpresenceofthedetergentTritonX-100modify the observed localization. AntibodyRP(Myl)-lwasincubatedovernightat a1:500 dilutioninPBS. Hybridoma culturesupematantsofAblOa(A1),Ab9a(F)andAb(F3)were

used atdilutions of1:1, 1:10 and 1:200, respectively. The Texas Red conjugated second antibody (Jackson Immunoresearch Laboratories),was

incubated for 1 h and diluted 40 times for anti-rabbit antibody and 200times foranti-mouse antibody.Fordoublelabelling, MylandMylRAR-A[detected

withRP(Myl)-ldiluted at1:500] were revealed with Texas Redconjugated anti-rabbit IgGsecondantibody (JacksonImmunoresearchLaboratories) diluted40timesandMylRAR-BorRAR-ca[detected withAb9a(F)diluted

at1:10]wererevealed with fluoresceinconjugated anti-mouse IgG second

antibody (JacksonImmunoresearchLaboratories) diluted 10times.

Immunoprecipitationreactionswerecarried out as follows. Cos-1 cells (9cmpetri dishes) were transfected with 2 Mg of each expression vector, asindicatedinFigure7.Cells were washed with PBS and scraped in 1 ml perdishof RIPA buffer(10mMTris-HCI,pH 7.5, 120 mM NaCl,

1%

NP-40, 1%deoxycholate, 0.1%SDS, 1 mM PMSF andPIC(leupeptin, aprotinin,pepstatin, antitrypsin and chymostatin at 0.5 11/mleach). After 15 minonice, the lysedcells were spun at 5000 r.p.m. for 15minat

4°C.

Immunoprecipitations(1 ml extract) wereperformedas described (Rochette-Egly etal., 1991). Immunoprecipitates were separated on 7.5%

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