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Population genomics reveals additive and replacing horizontal gene transfers in the emerging pathogen Dickeya solani

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Academic year: 2021

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Fig. 1 MLSA and ANIs of D. solani strains. In MLSA the sequences of the genes (rpoD, gyrB, recA, rpoS, dnaX, dnaA, gapA, fusA, rplB, purA, gyrA) were aligned with ClustalW, and a Neighbour-joining tree was created by Bootstrap method with 1000 bootstrap re
Fig. 2 Number of genes affected by variations (SNPs and InDels).
Fig. 3 Mapping of the clustered and scaterred SNP/InDel variations using Dsl 3337 as a reference genome
Fig. 4 Mapping and phylogeny of the Dsl 0512 variant genes. In panel a, Position of variant genes of Dsl 0512 on the reference strains Dsl 3337.
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