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Advanced Human-Machine Interaction Interaction Data Analysis TD02: Sequence Alignment

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Advanced Human-Machine Interaction Interaction Data Analysis

TD02: Sequence Alignment

INSA Rouen Normandie - Normandie University

TD Machine

1. Implement the Smith & Waterman algorithm for sequence alignments.

2. Test your algorithm on one of given existing databases (or use the sequence generator) 3. Explore the impact of each of the edition costs on the obtained results.

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