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Fixed-Parameter Algorithms For Protein Similarity Search Under mRNA Structure Constraints

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Figure

Fig. 1. The translation of UGA into selenocysteine. Termination of translation is inhibited in the presence of the SECIS element.
Fig. 2. (a) An example of an implied structure graph obtained from the set of structure constraints
Fig. 3. Algorithm A NEB .
Fig. 4. The difference between nice edge bipartitions and 2-page embeddings. In (a) a nice edge bipartition of a subcubic graph
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